RNA–Protein interactions for RNA: ENST00000453396.5

SMIM27-204, Transcript of small integral membrane protein 27, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SMIM27, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27-204ENST00000453396 ITPK1Q13572 414 aa23.28■■□□□ 1.32
SMIM27-204ENST00000453396 AMER1Q5JTC6 1135 aaPredicted RBP23.27■■□□□ 1.32
SMIM27-204ENST00000453396 ZNF530Q6P9A1 599 aaPredicted RBP23.27■■□□□ 1.32
SMIM27-204ENST00000453396 HSP90AB1P08238 724 aaKnown RBP23.26■■□□□ 1.31
SMIM27-204ENST00000453396 DCAF5Q96JK2 942 aa23.26■■□□□ 1.31
SMIM27-204ENST00000453396 ERVV-2B6SEH9 535 aa23.25■■□□□ 1.31
SMIM27-204ENST00000453396 AMOTQ4VCS5 1084 aa23.25■■□□□ 1.31
SMIM27-204ENST00000453396 SULT6B1Q6IMI4 303 aa23.25■■□□□ 1.31
SMIM27-204ENST00000453396 GNPATO15228 680 aa23.24■■□□□ 1.31
SMIM27-204ENST00000453396 SSFA2P28290 1259 aa23.24■■□□□ 1.31
SMIM27-204ENST00000453396 IL13P35225 146 aa23.23■■□□□ 1.31
SMIM27-204ENST00000453396 KDM6AO15550 1401 aaPredicted RBP23.23■■□□□ 1.31
SMIM27-204ENST00000453396 RBM42Q9BTD8 480 aaKnown RBP23.22■■□□□ 1.31
SMIM27-204ENST00000453396 YBX3P16989 372 aaKnown RBP eCLIP23.21■■□□□ 1.319e-6■□□□□ 10.4
SMIM27-204ENST00000453396 MTHFSP49914 203 aa23.21■■□□□ 1.31
SMIM27-204ENST00000453396 CABP4P57796 275 aa23.21■■□□□ 1.31
SMIM27-204ENST00000453396 C1orf141Q5JVX7 400 aa23.21■■□□□ 1.31
SMIM27-204ENST00000453396 SLC4A9Q96Q91 983 aa23.21■■□□□ 1.31
SMIM27-204ENST00000453396 CD2APQ9Y5K6 639 aa23.21■■□□□ 1.31
SMIM27-204ENST00000453396 KDRP35968 1356 aa23.21■■□□□ 1.31
SMIM27-204ENST00000453396 PER1O15534 1290 aaPredicted RBP23.18■■□□□ 1.3
SMIM27-204ENST00000453396 GRIN3BO60391 1043 aa23.17■■□□□ 1.3
SMIM27-204ENST00000453396 CC2D1BQ5T0F9 858 aaKnown RBP23.17■■□□□ 1.3
SMIM27-204ENST00000453396 ZNF831Q5JPB2 1677 aa23.16■■□□□ 1.3
SMIM27-204ENST00000453396 NFATC2IPQ8NCF5 419 aa23.16■■□□□ 1.3
SMIM27-204ENST00000453396 RTCBQ9Y3I0 505 aaKnown RBP23.15■■□□□ 1.3
SMIM27-204ENST00000453396 COL5A3P25940 1745 aaPredicted RBP23.14■■□□□ 1.3
SMIM27-204ENST00000453396 TRAPPC3LQ5T215 181 aa23.14■■□□□ 1.29
SMIM27-204ENST00000453396 PTCD1O75127 700 aaKnown RBP23.13■■□□□ 1.29
SMIM27-204ENST00000453396 HMOX1P09601 288 aa23.13■■□□□ 1.29
SMIM27-204ENST00000453396 SCN11AQ9UI33 1791 aa23.13■■□□□ 1.29
SMIM27-204ENST00000453396 MYH14Q7Z406 1995 aaKnown RBP23.12■■□□□ 1.29
SMIM27-204ENST00000453396 CNGB1Q14028 1251 aaPredicted RBP23.12■■□□□ 1.29
SMIM27-204ENST00000453396 RC3H1Q5TC82 1133 aaKnown RBP23.12■■□□□ 1.29
SMIM27-204ENST00000453396 CNTNAP4Q9C0A0 1308 aa23.11■■□□□ 1.29
SMIM27-204ENST00000453396 MMP10P09238 476 aa23.11■■□□□ 1.29
SMIM27-204ENST00000453396 AKAP4Q5JQC9 854 aa23.11■■□□□ 1.29
SMIM27-204ENST00000453396 ARHGEF1Q92888 912 aaKnown RBP23.11■■□□□ 1.29
SMIM27-204ENST00000453396 WWC3Q9ULE0 1092 aa23.11■■□□□ 1.29
SMIM27-204ENST00000453396 DIAPH1O60610 1272 aaKnown RBP23.09■■□□□ 1.29
SMIM27-204ENST00000453396 RPS6KA4O75676 772 aa23.09■■□□□ 1.29
SMIM27-204ENST00000453396 ADRA2BP18089 450 aa23.09■■□□□ 1.29
SMIM27-204ENST00000453396 LGR6Q9HBX8 967 aa23.08■■□□□ 1.29
SMIM27-204ENST00000453396 RFC4P35249 363 aa23.07■■□□□ 1.28
SMIM27-204ENST00000453396 NLGN1Q8N2Q7 840 aa23.07■■□□□ 1.28
SMIM27-204ENST00000453396 VIRMAQ69YN4 1812 aaKnown RBP23.07■■□□□ 1.28
SMIM27-204ENST00000453396 CRKLP46109 303 aaKnown RBP23.06■■□□□ 1.28
SMIM27-204ENST00000453396 SLC52A2Q9HAB3 445 aa23.06■■□□□ 1.28
SMIM27-204ENST00000453396 TJP1Q07157 1748 aa23.05■■□□□ 1.28
SMIM27-204ENST00000453396 GYS1P13807 737 aa23.05■■□□□ 1.28
SMIM27-204ENST00000453396 MTHFSDQ2M296 383 aaKnown RBP23.05■■□□□ 1.28
SMIM27-204ENST00000453396 C4AP0C0L4 1744 aa23.05■■□□□ 1.28
SMIM27-204ENST00000453396 CICQ96RK0 1608 aaPredicted RBP23.04■■□□□ 1.28
SMIM27-204ENST00000453396 NPC1L1Q9UHC9 1359 aa23.04■■□□□ 1.28
SMIM27-204ENST00000453396 RNMTO43148 476 aaKnown RBP23.04■■□□□ 1.28
SMIM27-204ENST00000453396 C1QTNF8P60827 252 aa23.03■■□□□ 1.28
SMIM27-204ENST00000453396 SLC39A6Q13433 755 aa23.02■■□□□ 1.28
SMIM27-204ENST00000453396 KIF13BQ9NQT8 1826 aa23.02■■□□□ 1.28
SMIM27-204ENST00000453396 COL3A1P02461 1466 aaPredicted RBP23.01■■□□□ 1.27
SMIM27-204ENST00000453396 MRC1P22897 1456 aa23.01■■□□□ 1.27
SMIM27-204ENST00000453396 GIGYF1O75420 1035 aaPredicted RBP23.01■■□□□ 1.27
SMIM27-204ENST00000453396 DNAJC10Q8IXB1 793 aa23.01■■□□□ 1.27
SMIM27-204ENST00000453396 N4BP2Q86UW6 1770 aaPredicted RBP23■■□□□ 1.27
SMIM27-204ENST00000453396 U2SURPO15042 1029 aaKnown RBP23■■□□□ 1.27
SMIM27-204ENST00000453396 SRP68Q9UHB9 627 aaKnown RBP23■■□□□ 1.27
SMIM27-204ENST00000453396 PARP3Q9Y6F1 533 aa23■■□□□ 1.27
SMIM27-204ENST00000453396 PXDNLA1KZ92 1463 aa22.99■■□□□ 1.27
SMIM27-204ENST00000453396 INTS5Q6P9B9 1019 aaKnown RBP22.99■■□□□ 1.27
SMIM27-204ENST00000453396 CCDC87Q9NVE4 849 aa22.99■■□□□ 1.27
SMIM27-204ENST00000453396 KIAA1551Q9HCM1 1747 aa22.99■■□□□ 1.27
SMIM27-204ENST00000453396 ATP10DQ9P241 1426 aa22.99■■□□□ 1.27
SMIM27-204ENST00000453396 ADAMTS7Q9UKP4 1686 aa22.98■■□□□ 1.27
SMIM27-204ENST00000453396 TGFB2P61812 414 aa22.98■■□□□ 1.27
SMIM27-204ENST00000453396 C10orf71Q711Q0 1435 aa22.98■■□□□ 1.27
SMIM27-204ENST00000453396 A0A0G2JLW4 131 aa22.97■■□□□ 1.27
SMIM27-204ENST00000453396 USP42Q9H9J4 1324 aaKnown RBP22.97■■□□□ 1.27
SMIM27-204ENST00000453396 FKBP8Q14318 412 aa22.96■■□□□ 1.27
SMIM27-204ENST00000453396 SENP3-EIF4A1A0A087X0R7 540 aa22.95■■□□□ 1.26
SMIM27-204ENST00000453396 KCPQ6ZWJ8 1503 aa22.95■■□□□ 1.26
SMIM27-204ENST00000453396 ADCY9O60503 1353 aa22.94■■□□□ 1.26
SMIM27-204ENST00000453396 CYP19A1P11511 503 aaPredicted RBP22.94■■□□□ 1.26
SMIM27-204ENST00000453396 DPEP1P16444 411 aa22.94■■□□□ 1.26
SMIM27-204ENST00000453396 BCS1LQ9Y276 419 aa22.94■■□□□ 1.26
SMIM27-204ENST00000453396 SOS1Q07889 1333 aaPredicted RBP22.93■■□□□ 1.26
SMIM27-204ENST00000453396 DDR1Q08345 913 aa22.92■■□□□ 1.26
SMIM27-204ENST00000453396 USPL1Q5W0Q7 1092 aa22.92■■□□□ 1.26
SMIM27-204ENST00000453396 GAS2L2Q8NHY3 880 aa22.92■■□□□ 1.26
SMIM27-204ENST00000453396 ZNF526Q8TF50 670 aaPredicted RBP22.92■■□□□ 1.26
SMIM27-204ENST00000453396 GNAT3A8MTJ3 354 aa22.91■■□□□ 1.26
SMIM27-204ENST00000453396 ZPR1O75312 459 aa22.91■■□□□ 1.26
SMIM27-204ENST00000453396 IL17REQ8NFR9 667 aa22.91■■□□□ 1.26
SMIM27-204ENST00000453396 GPBP1L1Q9HC44 474 aaPredicted RBP22.91■■□□□ 1.26
SMIM27-204ENST00000453396 ZBTB1Q9Y2K1 713 aa22.91■■□□□ 1.26
SMIM27-204ENST00000453396 TTC5Q8N0Z6 440 aa22.9■■□□□ 1.26
SMIM27-204ENST00000453396 VSIG10Q8N0Z9 540 aa22.9■■□□□ 1.26
SMIM27-204ENST00000453396 CFAP53Q96M91 514 aa22.9■■□□□ 1.26
SMIM27-204ENST00000453396 UBR2Q8IWV8 1755 aa22.9■■□□□ 1.26
SMIM27-204ENST00000453396 BRCA1P38398 1863 aaKnown RBP22.9■■□□□ 1.26
SMIM27-204ENST00000453396 TEFQ10587 303 aa22.89■■□□□ 1.25
SMIM27-204ENST00000453396 COL15A1P39059 1388 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms