RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 BCL9LQ86UU0 1499 aa7.74□□□□□ -1.17
SDC4P-201ENST00000453285 KCNQ3O43525 872 aa7.73□□□□□ -1.17
SDC4P-201ENST00000453285 FNBP4Q8N3X1 1017 aaPredicted RBP7.73□□□□□ -1.17
SDC4P-201ENST00000453285 MRPL50Q8N5N7 158 aaKnown RBP7.73□□□□□ -1.17
SDC4P-201ENST00000453285 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.73□□□□□ -1.17
SDC4P-201ENST00000453285 EXOC6Q8TAG9 804 aa7.73□□□□□ -1.17
SDC4P-201ENST00000453285 DCAF5Q96JK2 942 aa7.73□□□□□ -1.17
SDC4P-201ENST00000453285 CRBNQ96SW2 442 aa7.73□□□□□ -1.17
SDC4P-201ENST00000453285 SLC52A2Q9HAB3 445 aa7.73□□□□□ -1.17
SDC4P-201ENST00000453285 USP35Q9P2H5 1018 aa7.73□□□□□ -1.17
SDC4P-201ENST00000453285 TNNQ9UQP3 1299 aa7.73□□□□□ -1.17
SDC4P-201ENST00000453285 PCDH11XQ9BZA7 1347 aa7.73□□□□□ -1.17
SDC4P-201ENST00000453285 PCDH11YQ9BZA8 1340 aa7.73□□□□□ -1.17
SDC4P-201ENST00000453285 HEG1Q9ULI3 1381 aa7.72□□□□□ -1.17
SDC4P-201ENST00000453285 N4BP2Q86UW6 1770 aaPredicted RBP7.72□□□□□ -1.17
SDC4P-201ENST00000453285 BTBD11A6QL63 1104 aa7.72□□□□□ -1.17
SDC4P-201ENST00000453285 HSP90AB1P08238 724 aaKnown RBP7.72□□□□□ -1.17
SDC4P-201ENST00000453285 EIF4A1P60842 406 aaKnown RBP7.72□□□□□ -1.17
SDC4P-201ENST00000453285 TEFQ10587 303 aa7.72□□□□□ -1.17
SDC4P-201ENST00000453285 PDE3AQ14432 1141 aa7.72□□□□□ -1.17
SDC4P-201ENST00000453285 UNC5CLQ8IV45 518 aa7.72□□□□□ -1.17
SDC4P-201ENST00000453285 SMC4Q9NTJ3 1288 aa7.72□□□□□ -1.17
SDC4P-201ENST00000453285 PPP4R2Q9NY27 417 aa7.72□□□□□ -1.17
SDC4P-201ENST00000453285 THRAP3Q9Y2W1 955 aaKnown RBP7.72□□□□□ -1.17
SDC4P-201ENST00000453285 DOT1LQ8TEK3 1739 aa7.72□□□□□ -1.17
SDC4P-201ENST00000453285 GLI3P10071 1580 aa7.71□□□□□ -1.17
SDC4P-201ENST00000453285 LAMB4A4D0S4 1761 aa7.71□□□□□ -1.17
SDC4P-201ENST00000453285 SBF2Q86WG5 1849 aa7.71□□□□□ -1.17
SDC4P-201ENST00000453285 TCERG1O14776 1098 aaKnown RBP7.71□□□□□ -1.18
SDC4P-201ENST00000453285 RLBP1P12271 317 aa7.71□□□□□ -1.18
SDC4P-201ENST00000453285 VPS72Q15906 364 aa7.71□□□□□ -1.18
SDC4P-201ENST00000453285 BARGINQ6ZT62 677 aa7.71□□□□□ -1.18
SDC4P-201ENST00000453285 NFATC2IPQ8NCF5 419 aa7.71□□□□□ -1.18
SDC4P-201ENST00000453285 FRAT1Q92837 279 aaPredicted RBP7.71□□□□□ -1.18
SDC4P-201ENST00000453285 NGLY1Q96IV0 654 aa7.71□□□□□ -1.18
SDC4P-201ENST00000453285 C8orf37Q96NL8 207 aa7.71□□□□□ -1.18
SDC4P-201ENST00000453285 NOB1Q9ULX3 412 aaKnown RBP7.71□□□□□ -1.18
SDC4P-201ENST00000453285 SOS1Q07889 1333 aaPredicted RBP7.71□□□□□ -1.18
SDC4P-201ENST00000453285 TNS2Q63HR2 1409 aa7.7□□□□□ -1.18
SDC4P-201ENST00000453285 THSD7AQ9UPZ6 1657 aa7.7□□□□□ -1.18
SDC4P-201ENST00000453285 ERVV-2B6SEH9 535 aa7.7□□□□□ -1.18
SDC4P-201ENST00000453285 ZKSCAN2Q63HK3 967 aa7.7□□□□□ -1.18
SDC4P-201ENST00000453285 ATF7IPQ6VMQ6 1270 aa7.7□□□□□ -1.18
SDC4P-201ENST00000453285 DDX54Q8TDD1 881 aaKnown RBP7.7□□□□□ -1.18
SDC4P-201ENST00000453285 PANK1Q8TE04 598 aa7.7□□□□□ -1.18
SDC4P-201ENST00000453285 ARHGAP45Q92619 1136 aa7.7□□□□□ -1.18
SDC4P-201ENST00000453285 CDCA7Q9BWT1 371 aaPredicted RBP7.7□□□□□ -1.18
SDC4P-201ENST00000453285 BRWD3Q6RI45 1802 aa7.7□□□□□ -1.18
SDC4P-201ENST00000453285 EXOC5O00471 708 aa7.69□□□□□ -1.18
SDC4P-201ENST00000453285 HOXB7P09629 217 aa7.69□□□□□ -1.18
SDC4P-201ENST00000453285 TRIM27P14373 513 aa7.69□□□□□ -1.18
SDC4P-201ENST00000453285 SLC39A6Q13433 755 aa7.69□□□□□ -1.18
SDC4P-201ENST00000453285 ZNF790Q6PG37 636 aa7.69□□□□□ -1.18
SDC4P-201ENST00000453285 KIF16BQ96L93 1317 aa7.69□□□□□ -1.18
SDC4P-201ENST00000453285 RGS12O14924 1447 aa7.69□□□□□ -1.18
SDC4P-201ENST00000453285 KCPQ6ZWJ8 1503 aa7.68□□□□□ -1.18
SDC4P-201ENST00000453285 IPO8O15397 1037 aaKnown RBP7.68□□□□□ -1.18
SDC4P-201ENST00000453285 GIGYF1O75420 1035 aaPredicted RBP7.68□□□□□ -1.18
SDC4P-201ENST00000453285 CABP4P57796 275 aa7.68□□□□□ -1.18
SDC4P-201ENST00000453285 G2E3Q7L622 706 aa7.68□□□□□ -1.18
SDC4P-201ENST00000453285 DZIP1LQ8IYY4 767 aaKnown RBP7.68□□□□□ -1.18
SDC4P-201ENST00000453285 CLUAP1Q96AJ1 413 aa7.68□□□□□ -1.18
SDC4P-201ENST00000453285 USP21Q9UK80 565 aa7.68□□□□□ -1.18
SDC4P-201ENST00000453285 COG6Q9Y2V7 657 aa7.68□□□□□ -1.18
SDC4P-201ENST00000453285 ATRNO75882 1429 aa7.68□□□□□ -1.18
SDC4P-201ENST00000453285 PRAMEF22A3QJZ6 481 aa7.67□□□□□ -1.18
SDC4P-201ENST00000453285 SLC4A2P04920 1241 aa7.67□□□□□ -1.18
SDC4P-201ENST00000453285 MS4A1P11836 297 aa7.67□□□□□ -1.18
SDC4P-201ENST00000453285 CANXP27824 592 aaKnown RBP7.67□□□□□ -1.18
SDC4P-201ENST00000453285 DDB1Q16531 1140 aa7.67□□□□□ -1.18
SDC4P-201ENST00000453285 CCDC30Q5VVM6 783 aa7.67□□□□□ -1.18
SDC4P-201ENST00000453285 B4GALNT3Q6L9W6 998 aa7.67□□□□□ -1.18
SDC4P-201ENST00000453285 MARCH10Q8NA82 808 aaPredicted RBP7.67□□□□□ -1.18
SDC4P-201ENST00000453285 ZNF496Q96IT1 587 aaPredicted RBP7.67□□□□□ -1.18
SDC4P-201ENST00000453285 CCDC9Q9Y3X0 531 aaKnown RBP7.67□□□□□ -1.18
SDC4P-201ENST00000453285 ABCC4O15439 1325 aa7.67□□□□□ -1.18
SDC4P-201ENST00000453285 AFF2P51816 1311 aa7.67□□□□□ -1.18
SDC4P-201ENST00000453285 ONECUT3O60422 494 aaPredicted RBP7.66□□□□□ -1.18
SDC4P-201ENST00000453285 MVPQ14764 893 aaKnown RBP7.66□□□□□ -1.18
SDC4P-201ENST00000453285 FAM98CQ17RN3 349 aaKnown RBP7.66□□□□□ -1.18
SDC4P-201ENST00000453285 HDGFL1Q5TGJ6 251 aa7.66□□□□□ -1.18
SDC4P-201ENST00000453285 MEX3CQ5U5Q3 659 aaKnown RBP7.66□□□□□ -1.18
SDC4P-201ENST00000453285 TMEM57Q8N5G2 664 aa7.66□□□□□ -1.18
SDC4P-201ENST00000453285 PIGBQ92521 554 aa7.66□□□□□ -1.18
SDC4P-201ENST00000453285 NECTIN2Q92692 538 aa7.66□□□□□ -1.18
SDC4P-201ENST00000453285 API5Q9BZZ5 524 aaKnown RBP7.66□□□□□ -1.18
SDC4P-201ENST00000453285 PTPRCP08575 1304 aa7.66□□□□□ -1.18
SDC4P-201ENST00000453285 BCL9O00512 1426 aa7.66□□□□□ -1.18
SDC4P-201ENST00000453285 TJP1Q07157 1748 aa7.66□□□□□ -1.18
SDC4P-201ENST00000453285 MYH14Q7Z406 1995 aaKnown RBP7.66□□□□□ -1.18
SDC4P-201ENST00000453285 BTAF1O14981 1849 aa7.65□□□□□ -1.18
SDC4P-201ENST00000453285 EIF2S2P20042 333 aaKnown RBP7.65□□□□□ -1.18
SDC4P-201ENST00000453285 PDIA6Q15084 440 aa7.65□□□□□ -1.18
SDC4P-201ENST00000453285 GJD4Q96KN9 370 aaPredicted RBP7.65□□□□□ -1.18
SDC4P-201ENST00000453285 FMNL2Q96PY5 1086 aa7.65□□□□□ -1.18
SDC4P-201ENST00000453285 STK31Q9BXU1 1019 aa7.65□□□□□ -1.18
SDC4P-201ENST00000453285 ATG3Q9NT62 314 aa7.65□□□□□ -1.18
SDC4P-201ENST00000453285 USP16Q9Y5T5 823 aa7.65□□□□□ -1.18
SDC4P-201ENST00000453285 AFDNP55196 1824 aaKnown RBP7.64□□□□□ -1.19
SDC4P-201ENST00000453285 ARFGEF2Q9Y6D5 1785 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms