RNA–Protein interactions for RNA: ENST00000453007.1

SCN3A-205, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 1,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-205ENST00000453007 COL25A1Q9BXS0 654 aaPredicted RBP10.18□□□□□ -0.78
SCN3A-205ENST00000453007 CNTNAP3Q9BZ76 1288 aa10.18□□□□□ -0.78
SCN3A-205ENST00000453007 CENPCQ03188 943 aa10.17□□□□□ -0.78
SCN3A-205ENST00000453007 NBPF10Q6P3W6 841 aaKnown RBP10.17□□□□□ -0.78
SCN3A-205ENST00000453007 NBPF15Q8N660 670 aa10.17□□□□□ -0.78
SCN3A-205ENST00000453007 CHIC2Q9UKJ5 165 aa10.17□□□□□ -0.78
SCN3A-205ENST00000453007 POM121CA8CG34 1229 aa10.16□□□□□ -0.78
SCN3A-205ENST00000453007 TAS1R3Q7RTX0 852 aa10.16□□□□□ -0.78
SCN3A-205ENST00000453007 CALR3Q96L12 384 aaKnown RBP10.16□□□□□ -0.78
SCN3A-205ENST00000453007 ZSCAN10Q96SZ4 725 aaPredicted RBP10.16□□□□□ -0.78
SCN3A-205ENST00000453007 CCDC9Q9Y3X0 531 aaKnown RBP10.16□□□□□ -0.78
SCN3A-205ENST00000453007 EIF4G1Q04637 1599 aaKnown RBP10.16□□□□□ -0.78
SCN3A-205ENST00000453007 PIK3CDO00329 1044 aa10.15□□□□□ -0.78
SCN3A-205ENST00000453007 WASLO00401 505 aaPredicted RBP10.15□□□□□ -0.78
SCN3A-205ENST00000453007 STAU1O95793 577 aaKnown RBP10.15□□□□□ -0.78
SCN3A-205ENST00000453007 TMEM214Q6NUQ4 689 aaKnown RBP10.15□□□□□ -0.78
SCN3A-205ENST00000453007 RETREG2Q8NC44 543 aa10.15□□□□□ -0.78
SCN3A-205ENST00000453007 XAGE2Q96GT9 111 aa10.15□□□□□ -0.78
SCN3A-205ENST00000453007 TIMMDC1Q9NPL8 285 aa10.15□□□□□ -0.78
SCN3A-205ENST00000453007 CUEDC1Q9NWM3 386 aaPredicted RBP10.15□□□□□ -0.78
SCN3A-205ENST00000453007 DYRK1BQ9Y463 629 aa10.15□□□□□ -0.78
SCN3A-205ENST00000453007 SPATA31C2B4DYI2 1134 aa10.14□□□□□ -0.79
SCN3A-205ENST00000453007 SKIP12755 728 aa10.14□□□□□ -0.79
SCN3A-205ENST00000453007 KRT76Q01546 638 aa10.14□□□□□ -0.79
SCN3A-205ENST00000453007 HDGFL1Q5TGJ6 251 aa10.14□□□□□ -0.79
SCN3A-205ENST00000453007 GLMNQ92990 594 aa10.14□□□□□ -0.79
SCN3A-205ENST00000453007 ALG2Q9H553 416 aa10.14□□□□□ -0.79
SCN3A-205ENST00000453007 ETNK1Q9HBU6 452 aa10.14□□□□□ -0.79
SCN3A-205ENST00000453007 CECR2Q9BXF3 1484 aa10.14□□□□□ -0.79
SCN3A-205ENST00000453007 CC2D2AQ9P2K1 1620 aa10.14□□□□□ -0.79
SCN3A-205ENST00000453007 LORP23490 312 aaPredicted RBP10.13□□□□□ -0.79
SCN3A-205ENST00000453007 PHKA2P46019 1235 aa10.13□□□□□ -0.79
SCN3A-205ENST00000453007 GNASQ5JWF2 1037 aa10.13□□□□□ -0.79
SCN3A-205ENST00000453007 KCTD17Q8N5Z5 321 aa10.13□□□□□ -0.79
SCN3A-205ENST00000453007 TLR1Q15399 786 aa10.12□□□□□ -0.79
SCN3A-205ENST00000453007 RNFT1Q5M7Z0 435 aa10.12□□□□□ -0.79
SCN3A-205ENST00000453007 AEBP1Q8IUX7 1158 aa10.12□□□□□ -0.79
SCN3A-205ENST00000453007 H7C1W4 665 aa10.11□□□□□ -0.79
SCN3A-205ENST00000453007 EML3Q32P44 896 aa10.11□□□□□ -0.79
SCN3A-205ENST00000453007 WDR44Q5JSH3 913 aa10.11□□□□□ -0.79
SCN3A-205ENST00000453007 FOXR1Q6PIV2 292 aa10.11□□□□□ -0.79
SCN3A-205ENST00000453007 TRIM22Q8IYM9 498 aa10.11□□□□□ -0.79
SCN3A-205ENST00000453007 GDF10P55107 478 aa10.1□□□□□ -0.79
SCN3A-205ENST00000453007 ZNF837Q96EG3 531 aaPredicted RBP10.1□□□□□ -0.79
SCN3A-205ENST00000453007 GMCL1Q96IK5 515 aa10.1□□□□□ -0.79
SCN3A-205ENST00000453007 HRH3Q9Y5N1 445 aa10.1□□□□□ -0.79
SCN3A-205ENST00000453007 PPP1R15AO75807 674 aaPredicted RBP10.09□□□□□ -0.79
SCN3A-205ENST00000453007 DBN1Q16643 649 aa10.09□□□□□ -0.79
SCN3A-205ENST00000453007 FHDC1Q9C0D6 1143 aaPredicted RBP10.09□□□□□ -0.79
SCN3A-205ENST00000453007 NOD1Q9Y239 953 aa10.09□□□□□ -0.79
SCN3A-205ENST00000453007 GPR25O00155 361 aa10.08□□□□□ -0.8
SCN3A-205ENST00000453007 F11P03951 625 aa10.08□□□□□ -0.8
SCN3A-205ENST00000453007 INHAP05111 366 aa10.08□□□□□ -0.8
SCN3A-205ENST00000453007 SCNN1DP51172 638 aa10.08□□□□□ -0.8
SCN3A-205ENST00000453007 GPAMQ9HCL2 828 aa10.08□□□□□ -0.8
SCN3A-205ENST00000453007 PSME1Q06323 249 aa10.07□□□□□ -0.8
SCN3A-205ENST00000453007 NCOA4Q13772 614 aa10.07□□□□□ -0.8
SCN3A-205ENST00000453007 C4orf17Q53FE4 359 aa10.07□□□□□ -0.8
SCN3A-205ENST00000453007 DEPDC4Q8N2C3 294 aa10.07□□□□□ -0.8
SCN3A-205ENST00000453007 NFATC2IPQ8NCF5 419 aa10.07□□□□□ -0.8
SCN3A-205ENST00000453007 RHBDD1Q8TEB9 315 aa10.07□□□□□ -0.8
SCN3A-205ENST00000453007 GTPBP3Q969Y2 492 aaKnown RBP10.07□□□□□ -0.8
SCN3A-205ENST00000453007 SERTAD1Q9UHV2 236 aa10.07□□□□□ -0.8
SCN3A-205ENST00000453007 A0A1B0GTH6 734 aa10.06□□□□□ -0.8
SCN3A-205ENST00000453007 USP17L5A8MUK1 530 aa10.06□□□□□ -0.8
SCN3A-205ENST00000453007 LZTS3O60299 673 aaPredicted RBP10.06□□□□□ -0.8
SCN3A-205ENST00000453007 ADAMTS19Q8TE59 1207 aa10.06□□□□□ -0.8
SCN3A-205ENST00000453007 TRERF1Q96PN7 1200 aa10.06□□□□□ -0.8
SCN3A-205ENST00000453007 NUCKS1Q9H1E3 243 aaKnown RBP10.06□□□□□ -0.8
SCN3A-205ENST00000453007 GTF2IP78347 998 aa10.05□□□□□ -0.8
SCN3A-205ENST00000453007 PPARGC1BQ86YN6 1023 aaKnown RBP10.05□□□□□ -0.8
SCN3A-205ENST00000453007 ACIN1Q9UKV3 1341 aaKnown RBP10.05□□□□□ -0.8
SCN3A-205ENST00000453007 CSB-PGBD3P0DP91 1061 aa10.04□□□□□ -0.8
SCN3A-205ENST00000453007 PGBD3Q8N328 593 aa10.04□□□□□ -0.8
SCN3A-205ENST00000453007 SVOPQ8N4V2 548 aa10.04□□□□□ -0.8
SCN3A-205ENST00000453007 PCDHGA11Q9Y5H2 935 aa10.04□□□□□ -0.8
SCN3A-205ENST00000453007 PLA2G4AP47712 749 aa10.03□□□□□ -0.8
SCN3A-205ENST00000453007 SMTNP53814 917 aa10.03□□□□□ -0.8
SCN3A-205ENST00000453007 GAS6Q14393 721 aa10.03□□□□□ -0.8
SCN3A-205ENST00000453007 TMEM229AB2RXF0 380 aa10.02□□□□□ -0.81
SCN3A-205ENST00000453007 ADAMTS2O95450 1211 aa10.02□□□□□ -0.81
SCN3A-205ENST00000453007 RUBCNLQ9H714 662 aa10.02□□□□□ -0.81
SCN3A-205ENST00000453007 SLURP2P0DP57 97 aa10.01□□□□□ -0.81
SCN3A-205ENST00000453007 RFX1P22670 979 aa10.01□□□□□ -0.81
SCN3A-205ENST00000453007 MSX1P28360 303 aa10.01□□□□□ -0.81
SCN3A-205ENST00000453007 SRSF11Q05519 484 aaKnown RBP10.01□□□□□ -0.81
SCN3A-205ENST00000453007 TBC1D9Q6ZT07 1266 aa10.01□□□□□ -0.81
SCN3A-205ENST00000453007 AIDAQ96BJ3 306 aa10.01□□□□□ -0.81
SCN3A-205ENST00000453007 NIFKQ9BYG3 293 aaKnown RBP10.01□□□□□ -0.81
SCN3A-205ENST00000453007 MBIPQ9NS73 344 aa10.01□□□□□ -0.81
SCN3A-205ENST00000453007 USP17L3A6NCW0 530 aa10□□□□□ -0.81
SCN3A-205ENST00000453007 USP17L4A6NCW7 530 aa10□□□□□ -0.81
SCN3A-205ENST00000453007 A6NJY4 79 aa10□□□□□ -0.81
SCN3A-205ENST00000453007 BACH1O14867 736 aa10□□□□□ -0.81
SCN3A-205ENST00000453007 ZNF385CQ66K41 422 aaPredicted RBP10□□□□□ -0.81
SCN3A-205ENST00000453007 USP17L2Q6R6M4 530 aa10□□□□□ -0.81
SCN3A-205ENST00000453007 USP17L1Q7RTZ2 530 aa10□□□□□ -0.81
SCN3A-205ENST00000453007 TRIM50Q86XT4 487 aa10□□□□□ -0.81
SCN3A-205ENST00000453007 WHAMMQ8TF30 809 aa10□□□□□ -0.81
SCN3A-205ENST00000453007 PBXIP1Q96AQ6 731 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms