RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 FAM200AQ8TCP9 573 aa9.96□□□□□ -0.82
SMCO1-202ENST00000452776 C16orf45Q96MC5 204 aaPredicted RBP9.96□□□□□ -0.82
SMCO1-202ENST00000452776 CEP89Q96ST8 783 aa9.96□□□□□ -0.82
SMCO1-202ENST00000452776 SRRTQ9BXP5 876 aaKnown RBP9.96□□□□□ -0.82
SMCO1-202ENST00000452776 FAM107BQ9H098 131 aa9.96□□□□□ -0.82
SMCO1-202ENST00000452776 SLC52A1Q9NWF4 448 aa9.96□□□□□ -0.82
SMCO1-202ENST00000452776 NBPF20Q3BBV1 942 aa9.95□□□□□ -0.82
SMCO1-202ENST00000452776 SRLQ86TD4 932 aa9.95□□□□□ -0.82
SMCO1-202ENST00000452776 DRC7Q8IY82 874 aa9.95□□□□□ -0.82
SMCO1-202ENST00000452776 C10orf67Q8IYJ2 551 aa9.95□□□□□ -0.82
SMCO1-202ENST00000452776 SPDYE1Q8NFV5 336 aaPredicted RBP9.95□□□□□ -0.82
SMCO1-202ENST00000452776 SIRT1Q96EB6 747 aa9.95□□□□□ -0.82
SMCO1-202ENST00000452776 FUCA2Q9BTY2 467 aa9.95□□□□□ -0.82
SMCO1-202ENST00000452776 POLKQ9UBT6 870 aa9.95□□□□□ -0.82
SMCO1-202ENST00000452776 TNNQ9UQP3 1299 aa9.95□□□□□ -0.82
SMCO1-202ENST00000452776 LRRFIP2Q9Y608 721 aaKnown RBP9.95□□□□□ -0.82
SMCO1-202ENST00000452776 ZNF644Q9H582 1327 aaPredicted RBP9.94□□□□□ -0.82
SMCO1-202ENST00000452776 USP8P40818 1118 aa9.94□□□□□ -0.82
SMCO1-202ENST00000452776 CLCN6P51797 869 aa9.94□□□□□ -0.82
SMCO1-202ENST00000452776 GSCP56915 257 aaPredicted RBP9.94□□□□□ -0.82
SMCO1-202ENST00000452776 TMX3Q96JJ7 454 aa9.94□□□□□ -0.82
SMCO1-202ENST00000452776 MKRN1Q9UHC7 482 aaKnown RBP9.94□□□□□ -0.82
SMCO1-202ENST00000452776 LAMC3Q9Y6N6 1575 aa9.94□□□□□ -0.82
SMCO1-202ENST00000452776 PTPRCP08575 1304 aa9.94□□□□□ -0.82
SMCO1-202ENST00000452776 WDR62O43379 1518 aa9.94□□□□□ -0.82
SMCO1-202ENST00000452776 ERC2O15083 957 aa9.93□□□□□ -0.82
SMCO1-202ENST00000452776 TTC22Q5TAA0 569 aa9.93□□□□□ -0.82
SMCO1-202ENST00000452776 ZSCAN25Q6NSZ9 544 aa9.93□□□□□ -0.82
SMCO1-202ENST00000452776 LEKR1Q6ZMV7 388 aa9.93□□□□□ -0.82
SMCO1-202ENST00000452776 CCDC186Q7Z3E2 898 aa9.93□□□□□ -0.82
SMCO1-202ENST00000452776 TMEM57Q8N5G2 664 aa9.93□□□□□ -0.82
SMCO1-202ENST00000452776 TRERF1Q96PN7 1200 aa9.93□□□□□ -0.82
SMCO1-202ENST00000452776 BCL2L13Q9BXK5 485 aa9.93□□□□□ -0.82
SMCO1-202ENST00000452776 RAI14Q9P0K7 980 aa9.93□□□□□ -0.82
SMCO1-202ENST00000452776 ZNF215Q9UL58 517 aaPredicted RBP9.93□□□□□ -0.82
SMCO1-202ENST00000452776 NOB1Q9ULX3 412 aaKnown RBP9.93□□□□□ -0.82
SMCO1-202ENST00000452776 FHOD1Q9Y613 1164 aa9.93□□□□□ -0.82
SMCO1-202ENST00000452776 IQSEC2Q5JU85 1478 aa9.93□□□□□ -0.82
SMCO1-202ENST00000452776 MYOM2P54296 1465 aa9.93□□□□□ -0.82
SMCO1-202ENST00000452776 U2SURPO15042 1029 aaKnown RBP9.93□□□□□ -0.82
SMCO1-202ENST00000452776 CCP110O43303 1012 aa9.93□□□□□ -0.82
SMCO1-202ENST00000452776 PNMA6AP0CW24 399 aaPredicted RBP9.93□□□□□ -0.82
SMCO1-202ENST00000452776 PTGS1P23219 599 aa9.93□□□□□ -0.82
SMCO1-202ENST00000452776 ZRSR1Q15695 479 aaKnown RBP9.93□□□□□ -0.82
SMCO1-202ENST00000452776 SPC24Q8NBT2 197 aa9.93□□□□□ -0.82
SMCO1-202ENST00000452776 RRP15Q9Y3B9 282 aaKnown RBP9.93□□□□□ -0.82
SMCO1-202ENST00000452776 DNMBPQ6XZF7 1577 aa9.93□□□□□ -0.82
SMCO1-202ENST00000452776 KIF24Q5T7B8 1368 aa9.92□□□□□ -0.82
SMCO1-202ENST00000452776 SYNJ2O15056 1496 aa9.92□□□□□ -0.82
SMCO1-202ENST00000452776 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.92□□□□□ -0.82
SMCO1-202ENST00000452776 SPDYE2BA6NHP3 402 aa9.92□□□□□ -0.82
SMCO1-202ENST00000452776 RPS6KA5O75582 802 aa9.92□□□□□ -0.82
SMCO1-202ENST00000452776 SPDYE6P0CI01 402 aa9.92□□□□□ -0.82
SMCO1-202ENST00000452776 ATP6V1AP38606 617 aa9.92□□□□□ -0.82
SMCO1-202ENST00000452776 SPDYE2Q495Y8 402 aa9.92□□□□□ -0.82
SMCO1-202ENST00000452776 NYAP1Q6ZVC0 841 aa9.92□□□□□ -0.82
SMCO1-202ENST00000452776 CNPY4Q8N129 248 aa9.92□□□□□ -0.82
SMCO1-202ENST00000452776 MPNDQ8N594 471 aa9.92□□□□□ -0.82
SMCO1-202ENST00000452776 IL17RAQ96F46 866 aa9.92□□□□□ -0.82
SMCO1-202ENST00000452776 PCDH10Q9P2E7 1040 aa9.92□□□□□ -0.82
SMCO1-202ENST00000452776 PDS5BQ9NTI5 1447 aa9.92□□□□□ -0.82
SMCO1-202ENST00000452776 CROCC2H7BZ55 1655 aa9.92□□□□□ -0.82
SMCO1-202ENST00000452776 A2MP01023 1474 aa9.92□□□□□ -0.82
SMCO1-202ENST00000452776 PATL2C9JE40 543 aaKnown RBP9.91□□□□□ -0.82
SMCO1-202ENST00000452776 NRDCO43847 1150 aa9.91□□□□□ -0.82
SMCO1-202ENST00000452776 ACTN2P35609 894 aa9.91□□□□□ -0.82
SMCO1-202ENST00000452776 MCTP2Q6DN12 878 aa9.91□□□□□ -0.82
SMCO1-202ENST00000452776 SSH1Q8WYL5 1049 aa9.91□□□□□ -0.82
SMCO1-202ENST00000452776 UBXN6Q9BZV1 441 aa9.91□□□□□ -0.82
SMCO1-202ENST00000452776 CXorf56Q9H5V9 222 aa9.91□□□□□ -0.82
SMCO1-202ENST00000452776 L2HGDHQ9H9P8 463 aa9.91□□□□□ -0.82
SMCO1-202ENST00000452776 ATG3Q9NT62 314 aa9.91□□□□□ -0.82
SMCO1-202ENST00000452776 ZNF446Q9NWS9 450 aa9.91□□□□□ -0.82
SMCO1-202ENST00000452776 PLEKHG2Q9H7P9 1386 aa9.91□□□□□ -0.82
SMCO1-202ENST00000452776 NOS1P29475 1434 aa9.91□□□□□ -0.82
SMCO1-202ENST00000452776 KIF3CO14782 793 aa9.91□□□□□ -0.82
SMCO1-202ENST00000452776 ZBTB7BO15156 539 aaPredicted RBP9.91□□□□□ -0.82
SMCO1-202ENST00000452776 GADD45BO75293 160 aaPredicted RBP9.91□□□□□ -0.82
SMCO1-202ENST00000452776 ZRANB2O95218 330 aaKnown RBP eCLIP9.91□□□□□ -0.82
SMCO1-202ENST00000452776 PLA2G4AP47712 749 aa9.91□□□□□ -0.82
SMCO1-202ENST00000452776 ZNF75DP51815 510 aa9.91□□□□□ -0.82
SMCO1-202ENST00000452776 NEK4P51957 841 aa9.91□□□□□ -0.82
SMCO1-202ENST00000452776 ELF2Q15723 593 aa9.91□□□□□ -0.82
SMCO1-202ENST00000452776 NEUROD2Q15784 382 aa9.91□□□□□ -0.82
SMCO1-202ENST00000452776 JAKMIP3Q5VZ66 844 aa9.91□□□□□ -0.82
SMCO1-202ENST00000452776 PLA2G4DQ86XP0 818 aa9.91□□□□□ -0.82
SMCO1-202ENST00000452776 PLEKHM2Q8IWE5 1019 aa9.91□□□□□ -0.82
SMCO1-202ENST00000452776 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.91□□□□□ -0.82
SMCO1-202ENST00000452776 ZNF592Q92610 1267 aa9.91□□□□□ -0.82
SMCO1-202ENST00000452776 ATP10AO60312 1499 aa9.9□□□□□ -0.82
SMCO1-202ENST00000452776 CDK13Q14004 1512 aaKnown RBP9.9□□□□□ -0.82
SMCO1-202ENST00000452776 CPP00450 1065 aa9.9□□□□□ -0.82
SMCO1-202ENST00000452776 TDO2P48775 406 aa9.9□□□□□ -0.82
SMCO1-202ENST00000452776 RTF1Q92541 710 aaKnown RBP9.9□□□□□ -0.82
SMCO1-202ENST00000452776 UTP14AQ9BVJ6 771 aaKnown RBP9.9□□□□□ -0.82
SMCO1-202ENST00000452776 TRIM5Q9C035 493 aa9.9□□□□□ -0.82
SMCO1-202ENST00000452776 ERCC6Q03468 1493 aa9.9□□□□□ -0.82
SMCO1-202ENST00000452776 TROQ12816 1431 aaPredicted RBP9.9□□□□□ -0.83
SMCO1-202ENST00000452776 ZNF853P0CG23 659 aa9.89□□□□□ -0.83
SMCO1-202ENST00000452776 KCNJ6P48051 423 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms