RNA–Protein interactions for RNA: ENST00000452193.5

SMARCA2-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-215ENST00000452193 CABP4P57796 275 aa15.85■□□□□ 0.13
SMARCA2-215ENST00000452193 ZNF530Q6P9A1 599 aaPredicted RBP15.85■□□□□ 0.13
SMARCA2-215ENST00000452193 PELP1Q8IZL8 1130 aaKnown RBP15.84■□□□□ 0.13
SMARCA2-215ENST00000452193 ASAP1Q9ULH1 1129 aa15.84■□□□□ 0.13
SMARCA2-215ENST00000452193 DOT1LQ8TEK3 1739 aa15.84■□□□□ 0.13
SMARCA2-215ENST00000452193 RGPD2P0DJD1 1756 aa15.84■□□□□ 0.13
SMARCA2-215ENST00000452193 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.83■□□□□ 0.12
SMARCA2-215ENST00000452193 SULT6B1Q6IMI4 303 aa15.83■□□□□ 0.12
SMARCA2-215ENST00000452193 ATG3Q9NT62 314 aa15.83■□□□□ 0.12
SMARCA2-215ENST00000452193 MSL1Q68DK7 614 aa15.82■□□□□ 0.12
SMARCA2-215ENST00000452193 KIF7Q2M1P5 1343 aa15.82■□□□□ 0.12
SMARCA2-215ENST00000452193 LY75O60449 1722 aa15.82■□□□□ 0.12
SMARCA2-215ENST00000452193 GNPATO15228 680 aa15.81■□□□□ 0.12
SMARCA2-215ENST00000452193 PHF14O94880 888 aa15.81■□□□□ 0.12
SMARCA2-215ENST00000452193 MKRN4PQ13434 485 aaPredicted RBP15.81■□□□□ 0.12
SMARCA2-215ENST00000452193 TRAPPC3LQ5T215 181 aa15.81■□□□□ 0.12
SMARCA2-215ENST00000452193 RC3H1Q5TC82 1133 aaKnown RBP15.81■□□□□ 0.12
SMARCA2-215ENST00000452193 SHANK3Q9BYB0 1731 aa15.81■□□□□ 0.12
SMARCA2-215ENST00000452193 RTCBQ9Y3I0 505 aaKnown RBP15.81■□□□□ 0.12
SMARCA2-215ENST00000452193 IL13P35225 146 aa15.8■□□□□ 0.12
SMARCA2-215ENST00000452193 NLGN1Q8N2Q7 840 aa15.8■□□□□ 0.12
SMARCA2-215ENST00000452193 ZNF784Q8NCA9 323 aaPredicted RBP15.8■□□□□ 0.12
SMARCA2-215ENST00000452193 LINC00116Q8NCU8 138 aa15.8■□□□□ 0.12
SMARCA2-215ENST00000452193 RBM42Q9BTD8 480 aaKnown RBP15.8■□□□□ 0.12
SMARCA2-215ENST00000452193 QSER1Q2KHR3 1735 aa15.8■□□□□ 0.12
SMARCA2-215ENST00000452193 ANKRD26Q9UPS8 1709 aa15.8■□□□□ 0.12
SMARCA2-215ENST00000452193 PKD1L3Q7Z443 1732 aa15.78■□□□□ 0.12
SMARCA2-215ENST00000452193 DIAPH1O60610 1272 aaKnown RBP15.78■□□□□ 0.12
SMARCA2-215ENST00000452193 ITPK1Q13572 414 aa15.78■□□□□ 0.12
SMARCA2-215ENST00000452193 AKAP4Q5JQC9 854 aa15.78■□□□□ 0.12
SMARCA2-215ENST00000452193 NLGN2Q8NFZ4 835 aa15.78■□□□□ 0.12
SMARCA2-215ENST00000452193 MAP2P11137 1827 aaKnown RBP15.78■□□□□ 0.12
SMARCA2-215ENST00000452193 KDRP35968 1356 aa15.77■□□□□ 0.12
SMARCA2-215ENST00000452193 PER1O15534 1290 aaPredicted RBP15.77■□□□□ 0.12
SMARCA2-215ENST00000452193 AEBP1Q8IUX7 1158 aa15.77■□□□□ 0.12
SMARCA2-215ENST00000452193 NFATC2IPQ8NCF5 419 aa15.77■□□□□ 0.12
SMARCA2-215ENST00000452193 RFC4P35249 363 aa15.76■□□□□ 0.11
SMARCA2-215ENST00000452193 CC2D1BQ5T0F9 858 aaKnown RBP15.76■□□□□ 0.11
SMARCA2-215ENST00000452193 CNTNAP4Q9C0A0 1308 aa15.75■□□□□ 0.11
SMARCA2-215ENST00000452193 RPS6KA4O75676 772 aa15.75■□□□□ 0.11
SMARCA2-215ENST00000452193 NPC1L1Q9UHC9 1359 aa15.75■□□□□ 0.11
SMARCA2-215ENST00000452193 CAPN15O75808 1086 aa15.74■□□□□ 0.11
SMARCA2-215ENST00000452193 POTEDQ86YR6 584 aa15.74■□□□□ 0.11
SMARCA2-215ENST00000452193 PTCD1O75127 700 aaKnown RBP15.73■□□□□ 0.11
SMARCA2-215ENST00000452193 C4BP0C0L5 1744 aa15.73■□□□□ 0.11
SMARCA2-215ENST00000452193 MMP10P09238 476 aa15.72■□□□□ 0.11
SMARCA2-215ENST00000452193 POLA2Q14181 598 aa15.72■□□□□ 0.11
SMARCA2-215ENST00000452193 ARHGEF1Q92888 912 aaKnown RBP15.72■□□□□ 0.11
SMARCA2-215ENST00000452193 CFAP53Q96M91 514 aa15.72■□□□□ 0.11
SMARCA2-215ENST00000452193 C5P01031 1676 aa15.72■□□□□ 0.11
SMARCA2-215ENST00000452193 YBX3P16989 372 aaKnown RBP eCLIP15.71■□□□□ 0.11
SMARCA2-215ENST00000452193 TGFB2P61812 414 aa15.71■□□□□ 0.11
SMARCA2-215ENST00000452193 AMIGO3Q86WK7 504 aa15.71■□□□□ 0.11
SMARCA2-215ENST00000452193 SLC4A9Q96Q91 983 aa15.71■□□□□ 0.11
SMARCA2-215ENST00000452193 SLC52A2Q9HAB3 445 aa15.71■□□□□ 0.11
SMARCA2-215ENST00000452193 PARP3Q9Y6F1 533 aa15.71■□□□□ 0.11
SMARCA2-215ENST00000452193 KDM6AO15550 1401 aaPredicted RBP15.7■□□□□ 0.1
SMARCA2-215ENST00000452193 HMOX1P09601 288 aa15.7■□□□□ 0.1
SMARCA2-215ENST00000452193 CCDC87Q9NVE4 849 aa15.7■□□□□ 0.1
SMARCA2-215ENST00000452193 COL24A1Q17RW2 1714 aa15.7■□□□□ 0.1
SMARCA2-215ENST00000452193 UTRNP46939 3433 aa15.69■□□□□ 0.1
SMARCA2-215ENST00000452193 SPDYE4A6NLX3 237 aa15.69■□□□□ 0.1
SMARCA2-215ENST00000452193 CRKLP46109 303 aaKnown RBP15.69■□□□□ 0.1
SMARCA2-215ENST00000452193 GAS2L2Q8NHY3 880 aa15.69■□□□□ 0.1
SMARCA2-215ENST00000452193 NUDCQ9Y266 331 aa15.69■□□□□ 0.1
SMARCA2-215ENST00000452193 TOGARAM1Q9Y4F4 1720 aa15.68■□□□□ 0.1
SMARCA2-215ENST00000452193 U2SURPO15042 1029 aaKnown RBP15.68■□□□□ 0.1
SMARCA2-215ENST00000452193 RNMTO43148 476 aaKnown RBP15.68■□□□□ 0.1
SMARCA2-215ENST00000452193 GIGYF1O75420 1035 aaPredicted RBP15.68■□□□□ 0.1
SMARCA2-215ENST00000452193 C1QBPQ07021 282 aaKnown RBP15.68■□□□□ 0.1
SMARCA2-215ENST00000452193 SMIM5Q71RC9 77 aa15.68■□□□□ 0.1
SMARCA2-215ENST00000452193 VSIG10Q8N0Z9 540 aa15.68■□□□□ 0.1
SMARCA2-215ENST00000452193 ITGB4P16144 1822 aa15.68■□□□□ 0.1
SMARCA2-215ENST00000452193 ZPR1O75312 459 aa15.67■□□□□ 0.1
SMARCA2-215ENST00000452193 MTHFSDQ2M296 383 aaKnown RBP15.67■□□□□ 0.1
SMARCA2-215ENST00000452193 GYS1P13807 737 aa15.66■□□□□ 0.1
SMARCA2-215ENST00000452193 C1QTNF8P60827 252 aa15.66■□□□□ 0.1
SMARCA2-215ENST00000452193 TTC5Q8N0Z6 440 aa15.66■□□□□ 0.1
SMARCA2-215ENST00000452193 TEX13AQ9BXU3 409 aaPredicted RBP15.66■□□□□ 0.1
SMARCA2-215ENST00000452193 LGR6Q9HBX8 967 aa15.66■□□□□ 0.1
SMARCA2-215ENST00000452193 GNAT3A8MTJ3 354 aa15.65■□□□□ 0.1
SMARCA2-215ENST00000452193 STARD3NLO95772 234 aa15.65■□□□□ 0.1
SMARCA2-215ENST00000452193 TEFQ10587 303 aa15.65■□□□□ 0.1
SMARCA2-215ENST00000452193 TUBGCP6Q96RT7 1819 aa15.64■□□□□ 0.09
SMARCA2-215ENST00000452193 CNGB1Q14028 1251 aaPredicted RBP15.64■□□□□ 0.09
SMARCA2-215ENST00000452193 TAF1LQ8IZX4 1826 aa15.64■□□□□ 0.09
SMARCA2-215ENST00000452193 GOLGB1Q14789 3259 aaKnown RBP15.63■□□□□ 0.09
SMARCA2-215ENST00000452193 INTS5Q6P9B9 1019 aaKnown RBP15.63■□□□□ 0.09
SMARCA2-215ENST00000452193 NPM2Q86SE8 214 aaKnown RBP15.63■□□□□ 0.09
SMARCA2-215ENST00000452193 GPBP1L1Q9HC44 474 aaPredicted RBP15.63■□□□□ 0.09
SMARCA2-215ENST00000452193 DNAJC10Q8IXB1 793 aa15.62■□□□□ 0.09
SMARCA2-215ENST00000452193 ZNF831Q5JPB2 1677 aa15.62■□□□□ 0.09
SMARCA2-215ENST00000452193 USP42Q9H9J4 1324 aaKnown RBP15.62■□□□□ 0.09
SMARCA2-215ENST00000452193 A0A087WZG4 1122 aa15.61■□□□□ 0.09
SMARCA2-215ENST00000452193 CYP19A1P11511 503 aaPredicted RBP15.61■□□□□ 0.09
SMARCA2-215ENST00000452193 BCS1LQ9Y276 419 aa15.61■□□□□ 0.09
SMARCA2-215ENST00000452193 UBR3Q6ZT12 1888 aa15.61■□□□□ 0.09
SMARCA2-215ENST00000452193 CHD4Q14839 1912 aa15.6■□□□□ 0.09
SMARCA2-215ENST00000452193 A0A0G2JLW4 131 aa15.6■□□□□ 0.09
SMARCA2-215ENST00000452193 NEFMP07197 916 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms