RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 PHKG2P15735 406 aa15□□□□□ -0.01
USP1-204ENST00000452143 YBX3P16989 372 aaKnown RBP eCLIP15□□□□□ -0.016e-8■□□□□ 9.3
USP1-204ENST00000452143 SIK1P57059 783 aa15□□□□□ -0.01
USP1-204ENST00000452143 C1QTNF8P60827 252 aa15□□□□□ -0.01
USP1-204ENST00000452143 EIF4A2Q14240 407 aaKnown RBP15□□□□□ -0.01
USP1-204ENST00000452143 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.99□□□□□ -0.01
USP1-204ENST00000452143 EIF4G2P78344 907 aaKnown RBP eCLIP14.99□□□□□ -0.01
USP1-204ENST00000452143 KIF13BQ9NQT8 1826 aa14.99□□□□□ -0.01
USP1-204ENST00000452143 KDRP35968 1356 aa14.98□□□□□ -0.01
USP1-204ENST00000452143 GIGYF1O75420 1035 aaPredicted RBP14.98□□□□□ -0.01
USP1-204ENST00000452143 CICQ96RK0 1608 aaPredicted RBP14.97□□□□□ -0.01
USP1-204ENST00000452143 PHF14O94880 888 aa14.97□□□□□ -0.01
USP1-204ENST00000452143 AMIGO3Q86WK7 504 aa14.97□□□□□ -0.01
USP1-204ENST00000452143 LINC00116Q8NCU8 138 aa14.97□□□□□ -0.01
USP1-204ENST00000452143 POLR3GLQ9BT43 218 aa14.97□□□□□ -0.01
USP1-204ENST00000452143 HSP90AB1P08238 724 aaKnown RBP14.96□□□□□ -0.01
USP1-204ENST00000452143 TNNT2P45379 298 aaPredicted RBP14.96□□□□□ -0.01
USP1-204ENST00000452143 PCGF6Q9BYE7 350 aa14.96□□□□□ -0.01
USP1-204ENST00000452143 ASAP1Q9ULH1 1129 aa14.96□□□□□ -0.01
USP1-204ENST00000452143 SENP3-EIF4A1A0A087X0R7 540 aa14.95□□□□□ -0.02
USP1-204ENST00000452143 GNPATO15228 680 aa14.95□□□□□ -0.02
USP1-204ENST00000452143 ATP6V1AP38606 617 aa14.95□□□□□ -0.02
USP1-204ENST00000452143 ITPK1Q13572 414 aa14.95□□□□□ -0.02
USP1-204ENST00000452143 DCAF5Q96JK2 942 aa14.95□□□□□ -0.02
USP1-204ENST00000452143 C4AP0C0L4 1744 aa14.95□□□□□ -0.02
USP1-204ENST00000452143 CEP350Q5VT06 3117 aa14.94□□□□□ -0.02
USP1-204ENST00000452143 ERVV-2B6SEH9 535 aa14.94□□□□□ -0.02
USP1-204ENST00000452143 HSPA5P11021 654 aaKnown RBP14.94□□□□□ -0.02
USP1-204ENST00000452143 ATG3Q9NT62 314 aa14.94□□□□□ -0.02
USP1-204ENST00000452143 ADCY9O60503 1353 aa14.94□□□□□ -0.02
USP1-204ENST00000452143 KIAA1551Q9HCM1 1747 aa14.94□□□□□ -0.02
USP1-204ENST00000452143 KDM6AO15550 1401 aaPredicted RBP14.93□□□□□ -0.02
USP1-204ENST00000452143 ATP10DQ9P241 1426 aa14.93□□□□□ -0.02
USP1-204ENST00000452143 AMOTQ4VCS5 1084 aa14.93□□□□□ -0.02
USP1-204ENST00000452143 PANK3Q9H999 370 aa14.93□□□□□ -0.02
USP1-204ENST00000452143 SCN11AQ9UI33 1791 aa14.93□□□□□ -0.02
USP1-204ENST00000452143 PLEKHO1Q53GL0 409 aaPredicted RBP14.92□□□□□ -0.02
USP1-204ENST00000452143 CNTNAP4Q9C0A0 1308 aa14.92□□□□□ -0.02
USP1-204ENST00000452143 RTCBQ9Y3I0 505 aaKnown RBP14.91□□□□□ -0.02
USP1-204ENST00000452143 MYH14Q7Z406 1995 aaKnown RBP14.91□□□□□ -0.02
USP1-204ENST00000452143 VIRMAQ69YN4 1812 aaKnown RBP14.9□□□□□ -0.02
USP1-204ENST00000452143 TJP1Q07157 1748 aa14.9□□□□□ -0.02
USP1-204ENST00000452143 ZNF530Q6P9A1 599 aaPredicted RBP14.9□□□□□ -0.02
USP1-204ENST00000452143 SMIM5Q71RC9 77 aa14.9□□□□□ -0.02
USP1-204ENST00000452143 MORC1Q86VD1 984 aa14.9□□□□□ -0.02
USP1-204ENST00000452143 BRCA1P38398 1863 aaKnown RBP14.9□□□□□ -0.02
USP1-204ENST00000452143 C10orf71Q711Q0 1435 aa14.9□□□□□ -0.02
USP1-204ENST00000452143 PXDNLA1KZ92 1463 aa14.89□□□□□ -0.03
USP1-204ENST00000452143 N4BP2Q86UW6 1770 aaPredicted RBP14.89□□□□□ -0.03
USP1-204ENST00000452143 RC3H1Q5TC82 1133 aaKnown RBP14.89□□□□□ -0.03
USP1-204ENST00000452143 MMP10P09238 476 aa14.88□□□□□ -0.03
USP1-204ENST00000452143 C1orf141Q5JVX7 400 aa14.88□□□□□ -0.03
USP1-204ENST00000452143 TRAPPC3LQ5T215 181 aa14.88□□□□□ -0.03
USP1-204ENST00000452143 NLGN1Q8N2Q7 840 aa14.88□□□□□ -0.03
USP1-204ENST00000452143 SLC4A9Q96Q91 983 aa14.88□□□□□ -0.03
USP1-204ENST00000452143 RBM42Q9BTD8 480 aaKnown RBP14.88□□□□□ -0.03
USP1-204ENST00000452143 KNSTRNQ9Y448 316 aa14.88□□□□□ -0.03
USP1-204ENST00000452143 CABP4P57796 275 aa14.87□□□□□ -0.03
USP1-204ENST00000452143 GPBP1L1Q9HC44 474 aaPredicted RBP14.87□□□□□ -0.03
USP1-204ENST00000452143 MRC1P22897 1456 aa14.87□□□□□ -0.03
USP1-204ENST00000452143 MTHFSP49914 203 aa14.86□□□□□ -0.03
USP1-204ENST00000452143 AEBP1Q8IUX7 1158 aa14.86□□□□□ -0.03
USP1-204ENST00000452143 ZNF219Q9P2Y4 722 aaPredicted RBP14.86□□□□□ -0.03
USP1-204ENST00000452143 ARFGEF1Q9Y6D6 1849 aa14.86□□□□□ -0.03
USP1-204ENST00000452143 ADAMTS7Q9UKP4 1686 aa14.85□□□□□ -0.03
USP1-204ENST00000452143 RPS6KA4O75676 772 aa14.85□□□□□ -0.03
USP1-204ENST00000452143 TGFB2P61812 414 aa14.85□□□□□ -0.03
USP1-204ENST00000452143 SULT6B1Q6IMI4 303 aa14.85□□□□□ -0.03
USP1-204ENST00000452143 CCER1Q8TC90 406 aaPredicted RBP14.85□□□□□ -0.03
USP1-204ENST00000452143 GYS1P13807 737 aa14.84□□□□□ -0.03
USP1-204ENST00000452143 IL13P35225 146 aa14.84□□□□□ -0.03
USP1-204ENST00000452143 RFC4P35249 363 aa14.84□□□□□ -0.03
USP1-204ENST00000452143 AMER1Q5JTC6 1135 aaPredicted RBP14.84□□□□□ -0.03
USP1-204ENST00000452143 ARHGEF1Q92888 912 aaKnown RBP14.84□□□□□ -0.03
USP1-204ENST00000452143 ABCB7O75027 752 aa14.83□□□□□ -0.04
USP1-204ENST00000452143 KCNA4P22459 653 aa14.83□□□□□ -0.04
USP1-204ENST00000452143 CCDC87Q9NVE4 849 aa14.83□□□□□ -0.04
USP1-204ENST00000452143 NFATC2IPQ8NCF5 419 aa14.82□□□□□ -0.04
USP1-204ENST00000452143 WWC3Q9ULE0 1092 aa14.82□□□□□ -0.04
USP1-204ENST00000452143 UBR2Q8IWV8 1755 aa14.81□□□□□ -0.04
USP1-204ENST00000452143 PTCD1O75127 700 aaKnown RBP14.81□□□□□ -0.04
USP1-204ENST00000452143 CRKLP46109 303 aaKnown RBP14.81□□□□□ -0.04
USP1-204ENST00000452143 AKAP4Q5JQC9 854 aa14.81□□□□□ -0.04
USP1-204ENST00000452143 PARP3Q9Y6F1 533 aa14.81□□□□□ -0.04
USP1-204ENST00000452143 KIF7Q2M1P5 1343 aa14.81□□□□□ -0.04
USP1-204ENST00000452143 USP42Q9H9J4 1324 aaKnown RBP14.81□□□□□ -0.04
USP1-204ENST00000452143 KCPQ6ZWJ8 1503 aa14.79□□□□□ -0.04
USP1-204ENST00000452143 ZNF526Q8TF50 670 aaPredicted RBP14.79□□□□□ -0.04
USP1-204ENST00000452143 SLC52A2Q9HAB3 445 aa14.79□□□□□ -0.04
USP1-204ENST00000452143 BCS1LQ9Y276 419 aa14.79□□□□□ -0.04
USP1-204ENST00000452143 NRXN2Q9P2S2 1712 aa14.78□□□□□ -0.04
USP1-204ENST00000452143 A0A0G2JLW4 131 aa14.77□□□□□ -0.05
USP1-204ENST00000452143 DLEC1Q9Y238 1755 aa14.77□□□□□ -0.05
USP1-204ENST00000452143 NPC1L1Q9UHC9 1359 aa14.76□□□□□ -0.05
USP1-204ENST00000452143 AFDNP55196 1824 aaKnown RBP14.76□□□□□ -0.05
USP1-204ENST00000452143 DPEP1P16444 411 aa14.76□□□□□ -0.05
USP1-204ENST00000452143 HSPA6P17066 643 aa14.76□□□□□ -0.05
USP1-204ENST00000452143 COL3A1P02461 1466 aaPredicted RBP14.76□□□□□ -0.05
USP1-204ENST00000452143 SIPA1L3O60292 1781 aaPredicted RBP14.75□□□□□ -0.05
USP1-204ENST00000452143 SOS1Q07889 1333 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms