RNA–Protein interactions for RNA: ENST00000451405.1

RPUSD3-209, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-209ENST00000451405 AMIGO3Q86WK7 504 aa22.42■■□□□ 1.18
RPUSD3-209ENST00000451405 TMOD3Q9NYL9 352 aa22.42■■□□□ 1.18
RPUSD3-209ENST00000451405 IL13P35225 146 aa22.41■■□□□ 1.18
RPUSD3-209ENST00000451405 WWC3Q9ULE0 1092 aa22.41■■□□□ 1.18
RPUSD3-209ENST00000451405 PLEKHO1Q53GL0 409 aaPredicted RBP22.4■■□□□ 1.18
RPUSD3-209ENST00000451405 ATG3Q9NT62 314 aa22.4■■□□□ 1.18
RPUSD3-209ENST00000451405 LOC102724428A0A0B4J2F2 783 aa22.39■■□□□ 1.17
RPUSD3-209ENST00000451405 SIK1P57059 783 aa22.39■■□□□ 1.17
RPUSD3-209ENST00000451405 AK7Q96M32 723 aa22.39■■□□□ 1.17
RPUSD3-209ENST00000451405 SULT6B1Q6IMI4 303 aa22.38■■□□□ 1.17
RPUSD3-209ENST00000451405 LINC00116Q8NCU8 138 aa22.38■■□□□ 1.17
RPUSD3-209ENST00000451405 PLEKHG2Q9H7P9 1386 aa22.38■■□□□ 1.17
RPUSD3-209ENST00000451405 C4BP0C0L5 1744 aa22.37■■□□□ 1.17
RPUSD3-209ENST00000451405 MTHFSP49914 203 aa22.37■■□□□ 1.17
RPUSD3-209ENST00000451405 ITPK1Q13572 414 aa22.37■■□□□ 1.17
RPUSD3-209ENST00000451405 CC2D1BQ5T0F9 858 aaKnown RBP22.37■■□□□ 1.17
RPUSD3-209ENST00000451405 ZNF530Q6P9A1 599 aaPredicted RBP22.37■■□□□ 1.17
RPUSD3-209ENST00000451405 ADCY9O60503 1353 aa22.37■■□□□ 1.17
RPUSD3-209ENST00000451405 ERVV-2B6SEH9 535 aa22.36■■□□□ 1.17
RPUSD3-209ENST00000451405 PHF14O94880 888 aa22.35■■□□□ 1.17
RPUSD3-209ENST00000451405 APLP1P51693 650 aa22.35■■□□□ 1.17
RPUSD3-209ENST00000451405 AMOTQ4VCS5 1084 aa22.35■■□□□ 1.17
RPUSD3-209ENST00000451405 DCAF5Q96JK2 942 aa22.35■■□□□ 1.17
RPUSD3-209ENST00000451405 ATP6V1AP38606 617 aa22.34■■□□□ 1.17
RPUSD3-209ENST00000451405 SLC4A9Q96Q91 983 aa22.34■■□□□ 1.17
RPUSD3-209ENST00000451405 KDM6AO15550 1401 aaPredicted RBP22.33■■□□□ 1.17
RPUSD3-209ENST00000451405 HSP90AB1P08238 724 aaKnown RBP22.33■■□□□ 1.17
RPUSD3-209ENST00000451405 KDRP35968 1356 aa22.33■■□□□ 1.17
RPUSD3-209ENST00000451405 UBR3Q6ZT12 1888 aa22.32■■□□□ 1.16
RPUSD3-209ENST00000451405 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.32■■□□□ 1.16
RPUSD3-209ENST00000451405 KIF3CO14782 793 aa22.32■■□□□ 1.16
RPUSD3-209ENST00000451405 CNGB1Q14028 1251 aaPredicted RBP22.32■■□□□ 1.16
RPUSD3-209ENST00000451405 CABP4P57796 275 aa22.3■■□□□ 1.16
RPUSD3-209ENST00000451405 RBM42Q9BTD8 480 aaKnown RBP22.3■■□□□ 1.16
RPUSD3-209ENST00000451405 C1orf141Q5JVX7 400 aa22.29■■□□□ 1.16
RPUSD3-209ENST00000451405 NFATC2IPQ8NCF5 419 aa22.29■■□□□ 1.16
RPUSD3-209ENST00000451405 HMOX1P09601 288 aa22.28■■□□□ 1.16
RPUSD3-209ENST00000451405 SSFA2P28290 1259 aa22.28■■□□□ 1.16
RPUSD3-209ENST00000451405 GNPATO15228 680 aa22.27■■□□□ 1.16
RPUSD3-209ENST00000451405 TOMM70O94826 608 aa22.26■■□□□ 1.15
RPUSD3-209ENST00000451405 DIAPH1O60610 1272 aaKnown RBP22.25■■□□□ 1.15
RPUSD3-209ENST00000451405 LGR6Q9HBX8 967 aa22.25■■□□□ 1.15
RPUSD3-209ENST00000451405 NPC1L1Q9UHC9 1359 aa22.25■■□□□ 1.15
RPUSD3-209ENST00000451405 AKAP4Q5JQC9 854 aa22.24■■□□□ 1.15
RPUSD3-209ENST00000451405 PTCD1O75127 700 aaKnown RBP22.23■■□□□ 1.15
RPUSD3-209ENST00000451405 ARHGAP27Q6ZUM4 889 aa22.22■■□□□ 1.15
RPUSD3-209ENST00000451405 DNAJC5GQ8N7S2 189 aa22.22■■□□□ 1.15
RPUSD3-209ENST00000451405 BCS1LQ9Y276 419 aa22.22■■□□□ 1.15
RPUSD3-209ENST00000451405 ZNF831Q5JPB2 1677 aa22.21■■□□□ 1.15
RPUSD3-209ENST00000451405 SCN11AQ9UI33 1791 aa22.21■■□□□ 1.15
RPUSD3-209ENST00000451405 MTHFSDQ2M296 383 aaKnown RBP22.21■■□□□ 1.15
RPUSD3-209ENST00000451405 RC3H1Q5TC82 1133 aaKnown RBP22.21■■□□□ 1.15
RPUSD3-209ENST00000451405 C16orf71Q8IYS4 520 aaPredicted RBP22.21■■□□□ 1.15
RPUSD3-209ENST00000451405 MMP10P09238 476 aa22.2■■□□□ 1.14
RPUSD3-209ENST00000451405 TRAPPC3LQ5T215 181 aa22.2■■□□□ 1.14
RPUSD3-209ENST00000451405 RTCBQ9Y3I0 505 aaKnown RBP22.2■■□□□ 1.14
RPUSD3-209ENST00000451405 RNMTO43148 476 aaKnown RBP22.19■■□□□ 1.14
RPUSD3-209ENST00000451405 ARHGEF1Q92888 912 aaKnown RBP22.19■■□□□ 1.14
RPUSD3-209ENST00000451405 COL3A1P02461 1466 aaPredicted RBP22.19■■□□□ 1.14
RPUSD3-209ENST00000451405 COL5A3P25940 1745 aaPredicted RBP22.19■■□□□ 1.14
RPUSD3-209ENST00000451405 MYH14Q7Z406 1995 aaKnown RBP22.19■■□□□ 1.14
RPUSD3-209ENST00000451405 CNTNAP4Q9C0A0 1308 aa22.18■■□□□ 1.14
RPUSD3-209ENST00000451405 RPS6KA4O75676 772 aa22.18■■□□□ 1.14
RPUSD3-209ENST00000451405 TGFB2P61812 414 aa22.18■■□□□ 1.14
RPUSD3-209ENST00000451405 SLC52A2Q9HAB3 445 aa22.18■■□□□ 1.14
RPUSD3-209ENST00000451405 A0A0G2JLW4 131 aa22.17■■□□□ 1.14
RPUSD3-209ENST00000451405 NMRK2Q9NPI5 230 aa22.17■■□□□ 1.14
RPUSD3-209ENST00000451405 U2SURPO15042 1029 aaKnown RBP22.16■■□□□ 1.14
RPUSD3-209ENST00000451405 SLC39A6Q13433 755 aa22.16■■□□□ 1.14
RPUSD3-209ENST00000451405 CRKLP46109 303 aaKnown RBP22.15■■□□□ 1.14
RPUSD3-209ENST00000451405 FCHSD2O94868 740 aa22.14■■□□□ 1.13
RPUSD3-209ENST00000451405 NLGN1Q8N2Q7 840 aa22.14■■□□□ 1.13
RPUSD3-209ENST00000451405 VIRMAQ69YN4 1812 aaKnown RBP22.14■■□□□ 1.13
RPUSD3-209ENST00000451405 CAPN15O75808 1086 aa22.13■■□□□ 1.13
RPUSD3-209ENST00000451405 GYS1P13807 737 aa22.13■■□□□ 1.13
RPUSD3-209ENST00000451405 ADRA2BP18089 450 aa22.13■■□□□ 1.13
RPUSD3-209ENST00000451405 RFC4P35249 363 aa22.13■■□□□ 1.13
RPUSD3-209ENST00000451405 RBM46Q8TBY0 533 aaKnown RBP22.13■■□□□ 1.13
RPUSD3-209ENST00000451405 TJP1Q07157 1748 aa22.13■■□□□ 1.13
RPUSD3-209ENST00000451405 INTS5Q6P9B9 1019 aaKnown RBP22.12■■□□□ 1.13
RPUSD3-209ENST00000451405 DNAJC10Q8IXB1 793 aa22.12■■□□□ 1.13
RPUSD3-209ENST00000451405 CCDC87Q9NVE4 849 aa22.12■■□□□ 1.13
RPUSD3-209ENST00000451405 DPEP1P16444 411 aa22.11■■□□□ 1.13
RPUSD3-209ENST00000451405 KLRG1Q96E93 195 aa22.11■■□□□ 1.13
RPUSD3-209ENST00000451405 ADAMTS7Q9UKP4 1686 aa22.11■■□□□ 1.13
RPUSD3-209ENST00000451405 COL13A1Q5TAT6 717 aaPredicted RBP22.1■■□□□ 1.13
RPUSD3-209ENST00000451405 C9orf131Q5VYM1 1079 aa22.1■■□□□ 1.13
RPUSD3-209ENST00000451405 PXDNLA1KZ92 1463 aa22.09■■□□□ 1.13
RPUSD3-209ENST00000451405 MRC1P22897 1456 aa22.09■■□□□ 1.13
RPUSD3-209ENST00000451405 PPP2R1AP30153 589 aa22.09■■□□□ 1.13
RPUSD3-209ENST00000451405 HTRA3P83110 453 aa22.09■■□□□ 1.13
RPUSD3-209ENST00000451405 IL17REQ8NFR9 667 aa22.09■■□□□ 1.13
RPUSD3-209ENST00000451405 SRP68Q9UHB9 627 aaKnown RBP22.09■■□□□ 1.13
RPUSD3-209ENST00000451405 PARP3Q9Y6F1 533 aa22.09■■□□□ 1.13
RPUSD3-209ENST00000451405 FSTL1Q12841 308 aa22.08■■□□□ 1.13
RPUSD3-209ENST00000451405 PHACTR3Q96KR7 559 aa22.08■■□□□ 1.13
RPUSD3-209ENST00000451405 CICQ96RK0 1608 aaPredicted RBP22.07■■□□□ 1.12
RPUSD3-209ENST00000451405 C4AP0C0L4 1744 aa22.07■■□□□ 1.12
RPUSD3-209ENST00000451405 CYP19A1P11511 503 aaPredicted RBP22.07■■□□□ 1.12
RPUSD3-209ENST00000451405 KDM2BQ8NHM5 1336 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms