RNA–Protein interactions for RNA: ENST00000450514.5

HCG25-220, Transcript of HLA complex group 25, humanhuman

TSL 3 BASIC

Gene HCG25, Length 759 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG25-220ENST00000450514 NKX1-1Q15270 411 aaPredicted RBP13.02□□□□□ -0.33
HCG25-220ENST00000450514 CDCA8Q53HL2 280 aa13.01□□□□□ -0.33
HCG25-220ENST00000450514 NLGN1Q8N2Q7 840 aa13.01□□□□□ -0.33
HCG25-220ENST00000450514 CCDC87Q9NVE4 849 aa13.01□□□□□ -0.33
HCG25-220ENST00000450514 ASAP1Q9ULH1 1129 aa13.01□□□□□ -0.33
HCG25-220ENST00000450514 RTCBQ9Y3I0 505 aaKnown RBP13.01□□□□□ -0.33
HCG25-220ENST00000450514 PXDNLA1KZ92 1463 aa13.01□□□□□ -0.33
HCG25-220ENST00000450514 A0A0G2JLW4 131 aa13□□□□□ -0.33
HCG25-220ENST00000450514 FCHSD2O94868 740 aa13□□□□□ -0.33
HCG25-220ENST00000450514 ITPK1Q13572 414 aa13□□□□□ -0.33
HCG25-220ENST00000450514 TRAPPC3LQ5T215 181 aa13□□□□□ -0.33
HCG25-220ENST00000450514 IFNL2Q8IZJ0 200 aa13□□□□□ -0.33
HCG25-220ENST00000450514 EMILIN1Q9Y6C2 1016 aa13□□□□□ -0.33
HCG25-220ENST00000450514 WDR90Q96KV7 1748 aa12.99□□□□□ -0.33
HCG25-220ENST00000450514 NMRK2Q9NPI5 230 aa12.99□□□□□ -0.33
HCG25-220ENST00000450514 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.99□□□□□ -0.33
HCG25-220ENST00000450514 PARP3Q9Y6F1 533 aa12.99□□□□□ -0.33
HCG25-220ENST00000450514 RFC4P35249 363 aa12.98□□□□□ -0.33
HCG25-220ENST00000450514 DNAJC5GQ8N7S2 189 aa12.98□□□□□ -0.33
HCG25-220ENST00000450514 RBM42Q9BTD8 480 aaKnown RBP12.98□□□□□ -0.33
HCG25-220ENST00000450514 KIAA1551Q9HCM1 1747 aa12.98□□□□□ -0.33
HCG25-220ENST00000450514 PLEKHG2Q9H7P9 1386 aa12.97□□□□□ -0.33
HCG25-220ENST00000450514 C4AP0C0L4 1744 aa12.97□□□□□ -0.33
HCG25-220ENST00000450514 PHKG2P15735 406 aa12.97□□□□□ -0.33
HCG25-220ENST00000450514 DPEP1P16444 411 aa12.97□□□□□ -0.33
HCG25-220ENST00000450514 ADRA2BP18089 450 aa12.97□□□□□ -0.33
HCG25-220ENST00000450514 RBM46Q8TBY0 533 aaKnown RBP12.97□□□□□ -0.33
HCG25-220ENST00000450514 ATG3Q9NT62 314 aa12.97□□□□□ -0.33
HCG25-220ENST00000450514 BRCA1P38398 1863 aaKnown RBP12.97□□□□□ -0.33
HCG25-220ENST00000450514 ARFGEF1Q9Y6D6 1849 aa12.97□□□□□ -0.33
HCG25-220ENST00000450514 NCAPD2Q15021 1401 aa12.96□□□□□ -0.33
HCG25-220ENST00000450514 C10orf71Q711Q0 1435 aa12.96□□□□□ -0.33
HCG25-220ENST00000450514 KDM2BQ8NHM5 1336 aa12.96□□□□□ -0.33
HCG25-220ENST00000450514 C9orf131Q5VYM1 1079 aa12.96□□□□□ -0.33
HCG25-220ENST00000450514 EYA1Q99502 592 aa12.96□□□□□ -0.33
HCG25-220ENST00000450514 ANKRD26Q9UPS8 1709 aa12.96□□□□□ -0.34
HCG25-220ENST00000450514 WASHC2AQ641Q2 1341 aa12.95□□□□□ -0.34
HCG25-220ENST00000450514 ZEB1P37275 1124 aaPredicted RBP12.95□□□□□ -0.34
HCG25-220ENST00000450514 FSTL1Q12841 308 aa12.95□□□□□ -0.34
HCG25-220ENST00000450514 ARHGEF1Q92888 912 aaKnown RBP12.95□□□□□ -0.34
HCG25-220ENST00000450514 ZNF831Q5JPB2 1677 aa12.95□□□□□ -0.34
HCG25-220ENST00000450514 HSP90AB1P08238 724 aaKnown RBP12.94□□□□□ -0.34
HCG25-220ENST00000450514 RC3H1Q5TC82 1133 aaKnown RBP12.94□□□□□ -0.34
HCG25-220ENST00000450514 KLRG1Q96E93 195 aa12.94□□□□□ -0.34
HCG25-220ENST00000450514 PIM2Q9P1W9 311 aa12.94□□□□□ -0.34
HCG25-220ENST00000450514 COL5A3P25940 1745 aaPredicted RBP12.93□□□□□ -0.34
HCG25-220ENST00000450514 CNTNAP4Q9C0A0 1308 aa12.93□□□□□ -0.34
HCG25-220ENST00000450514 ERVV-2B6SEH9 535 aa12.93□□□□□ -0.34
HCG25-220ENST00000450514 RPS6KA4O75676 772 aa12.93□□□□□ -0.34
HCG25-220ENST00000450514 GYS1P13807 737 aa12.93□□□□□ -0.34
HCG25-220ENST00000450514 DALRD3Q5D0E6 543 aaKnown RBP12.93□□□□□ -0.34
HCG25-220ENST00000450514 CARD14Q9BXL6 1004 aa12.93□□□□□ -0.34
HCG25-220ENST00000450514 RNF181Q9P0P0 153 aa12.93□□□□□ -0.34
HCG25-220ENST00000450514 KDRP35968 1356 aa12.93□□□□□ -0.34
HCG25-220ENST00000450514 CAPN15O75808 1086 aa12.92□□□□□ -0.34
HCG25-220ENST00000450514 TNRC6CQ9HCJ0 1690 aaKnown RBP12.92□□□□□ -0.34
HCG25-220ENST00000450514 MYH14Q7Z406 1995 aaKnown RBP12.91□□□□□ -0.34
HCG25-220ENST00000450514 CABP4P57796 275 aa12.91□□□□□ -0.34
HCG25-220ENST00000450514 HTRA3P83110 453 aa12.91□□□□□ -0.34
HCG25-220ENST00000450514 DCAF5Q96JK2 942 aa12.91□□□□□ -0.34
HCG25-220ENST00000450514 KCPQ6ZWJ8 1503 aa12.91□□□□□ -0.34
HCG25-220ENST00000450514 SBF1O95248 1867 aa12.91□□□□□ -0.34
HCG25-220ENST00000450514 PLEKHO1Q53GL0 409 aaPredicted RBP12.9□□□□□ -0.34
HCG25-220ENST00000450514 COL13A1Q5TAT6 717 aaPredicted RBP12.9□□□□□ -0.34
HCG25-220ENST00000450514 JMYQ8N9B5 988 aa12.9□□□□□ -0.34
HCG25-220ENST00000450514 SLC4A9Q96Q91 983 aa12.9□□□□□ -0.34
HCG25-220ENST00000450514 RRAGCQ9HB90 399 aa12.9□□□□□ -0.34
HCG25-220ENST00000450514 POLKQ9UBT6 870 aa12.9□□□□□ -0.34
HCG25-220ENST00000450514 KCNA3P22001 575 aa12.89□□□□□ -0.35
HCG25-220ENST00000450514 TNNT2P45379 298 aaPredicted RBP12.89□□□□□ -0.35
HCG25-220ENST00000450514 EIF4A2Q14240 407 aaKnown RBP12.89□□□□□ -0.35
HCG25-220ENST00000450514 TNS4Q8IZW8 715 aa12.89□□□□□ -0.35
HCG25-220ENST00000450514 SMC1BQ8NDV3 1235 aa12.89□□□□□ -0.35
HCG25-220ENST00000450514 PTCD1O75127 700 aaKnown RBP12.88□□□□□ -0.35
HCG25-220ENST00000450514 C1orf141Q5JVX7 400 aa12.88□□□□□ -0.35
HCG25-220ENST00000450514 ZNF530Q6P9A1 599 aaPredicted RBP12.88□□□□□ -0.35
HCG25-220ENST00000450514 CRKLP46109 303 aaKnown RBP12.87□□□□□ -0.35
HCG25-220ENST00000450514 MTHFSP49914 203 aa12.87□□□□□ -0.35
HCG25-220ENST00000450514 AMOTQ4VCS5 1084 aa12.87□□□□□ -0.35
HCG25-220ENST00000450514 POLR3GLQ9BT43 218 aa12.87□□□□□ -0.35
HCG25-220ENST00000450514 SRP68Q9UHB9 627 aaKnown RBP12.87□□□□□ -0.35
HCG25-220ENST00000450514 USP42Q9H9J4 1324 aaKnown RBP12.87□□□□□ -0.35
HCG25-220ENST00000450514 ZPR1O75312 459 aa12.86□□□□□ -0.35
HCG25-220ENST00000450514 CHRNA5P30532 468 aa12.86□□□□□ -0.35
HCG25-220ENST00000450514 FKBP8Q14318 412 aa12.86□□□□□ -0.35
HCG25-220ENST00000450514 CCDC88AQ3V6T2 1871 aa12.85□□□□□ -0.35
HCG25-220ENST00000450514 DDR1Q08345 913 aa12.85□□□□□ -0.35
HCG25-220ENST00000450514 KDM6AO15550 1401 aaPredicted RBP12.85□□□□□ -0.35
HCG25-220ENST00000450514 ZC3H4Q9UPT8 1303 aaKnown RBP12.85□□□□□ -0.35
HCG25-220ENST00000450514 PRELPP51888 382 aa12.84□□□□□ -0.35
HCG25-220ENST00000450514 TIMELESSQ9UNS1 1208 aa12.84□□□□□ -0.35
HCG25-220ENST00000450514 TJP1Q07157 1748 aa12.83□□□□□ -0.36
HCG25-220ENST00000450514 VEGFAP15692 232 aaPredicted RBP12.83□□□□□ -0.36
HCG25-220ENST00000450514 LMNB1P20700 586 aa12.83□□□□□ -0.36
HCG25-220ENST00000450514 NFATC2IPQ8NCF5 419 aa12.83□□□□□ -0.36
HCG25-220ENST00000450514 POLRMTO00411 1230 aaKnown RBP12.82□□□□□ -0.36
HCG25-220ENST00000450514 RASSF7Q02833 373 aa12.82□□□□□ -0.36
HCG25-220ENST00000450514 AFDNP55196 1824 aaKnown RBP12.82□□□□□ -0.36
HCG25-220ENST00000450514 SCN11AQ9UI33 1791 aa12.81□□□□□ -0.36
HCG25-220ENST00000450514 GLTPD2A6NH11 291 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms