RNA–Protein interactions for RNA: ENST00000450454.6

TCEA3-203, Transcript of transcription elongation factor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCEA3, Length 1,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-203ENST00000450454 KDRP35968 1356 aa15.67■□□□□ 0.1
TCEA3-203ENST00000450454 RALBP1Q15311 655 aa15.67■□□□□ 0.1
TCEA3-203ENST00000450454 C1orf141Q5JVX7 400 aa15.67■□□□□ 0.1
TCEA3-203ENST00000450454 TAF1LQ8IZX4 1826 aa15.67■□□□□ 0.1
TCEA3-203ENST00000450454 C4BP0C0L5 1744 aa15.66■□□□□ 0.1
TCEA3-203ENST00000450454 COL24A1Q17RW2 1714 aa15.66■□□□□ 0.1
TCEA3-203ENST00000450454 NPC1L1Q9UHC9 1359 aa15.66■□□□□ 0.1
TCEA3-203ENST00000450454 YY1P25490 414 aa15.66■□□□□ 0.1
TCEA3-203ENST00000450454 CCDC184Q52MB2 194 aa15.66■□□□□ 0.1
TCEA3-203ENST00000450454 KLHL34Q8N239 644 aa15.66■□□□□ 0.1
TCEA3-203ENST00000450454 ATG3Q9NT62 314 aa15.66■□□□□ 0.1
TCEA3-203ENST00000450454 ATP6V1AP38606 617 aa15.65■□□□□ 0.1
TCEA3-203ENST00000450454 CABP4P57796 275 aa15.64■□□□□ 0.09
TCEA3-203ENST00000450454 LINC00116Q8NCU8 138 aa15.64■□□□□ 0.09
TCEA3-203ENST00000450454 MRS2Q9HD23 443 aa15.64■□□□□ 0.09
TCEA3-203ENST00000450454 KDM6AO15550 1401 aaPredicted RBP15.64■□□□□ 0.09
TCEA3-203ENST00000450454 MYBBP1AQ9BQG0 1328 aaKnown RBP15.63■□□□□ 0.09
TCEA3-203ENST00000450454 MSL1Q68DK7 614 aa15.63■□□□□ 0.09
TCEA3-203ENST00000450454 DIAPH1O60610 1272 aaKnown RBP15.62■□□□□ 0.09
TCEA3-203ENST00000450454 PHF14O94880 888 aa15.62■□□□□ 0.09
TCEA3-203ENST00000450454 SSFA2P28290 1259 aa15.62■□□□□ 0.09
TCEA3-203ENST00000450454 ITPK1Q13572 414 aa15.62■□□□□ 0.09
TCEA3-203ENST00000450454 CNGB1Q14028 1251 aaPredicted RBP15.62■□□□□ 0.09
TCEA3-203ENST00000450454 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.62■□□□□ 0.09
TCEA3-203ENST00000450454 RBM42Q9BTD8 480 aaKnown RBP15.62■□□□□ 0.09
TCEA3-203ENST00000450454 HMOX1P09601 288 aa15.61■□□□□ 0.09
TCEA3-203ENST00000450454 AKAP4Q5JQC9 854 aa15.61■□□□□ 0.09
TCEA3-203ENST00000450454 GNPATO15228 680 aa15.6■□□□□ 0.09
TCEA3-203ENST00000450454 AMIGO3Q86WK7 504 aa15.6■□□□□ 0.09
TCEA3-203ENST00000450454 UBR3Q6ZT12 1888 aa15.6■□□□□ 0.09
TCEA3-203ENST00000450454 GPR162Q16538 588 aa15.59■□□□□ 0.09
TCEA3-203ENST00000450454 NFATC2IPQ8NCF5 419 aa15.59■□□□□ 0.09
TCEA3-203ENST00000450454 SMIM5Q71RC9 77 aa15.58■□□□□ 0.09
TCEA3-203ENST00000450454 UTRNP46939 3433 aa15.58■□□□□ 0.09
TCEA3-203ENST00000450454 NLGN2Q8NFZ4 835 aa15.58■□□□□ 0.08
TCEA3-203ENST00000450454 SLC4A9Q96Q91 983 aa15.58■□□□□ 0.08
TCEA3-203ENST00000450454 ZNF831Q5JPB2 1677 aa15.57■□□□□ 0.08
TCEA3-203ENST00000450454 RTCBQ9Y3I0 505 aaKnown RBP15.57■□□□□ 0.08
TCEA3-203ENST00000450454 U2SURPO15042 1029 aaKnown RBP15.56■□□□□ 0.08
TCEA3-203ENST00000450454 PTCD1O75127 700 aaKnown RBP15.56■□□□□ 0.08
TCEA3-203ENST00000450454 RC3H1Q5TC82 1133 aaKnown RBP15.56■□□□□ 0.08
TCEA3-203ENST00000450454 PELP1Q8IZL8 1130 aaKnown RBP15.56■□□□□ 0.08
TCEA3-203ENST00000450454 CD2APQ9Y5K6 639 aa15.56■□□□□ 0.08
TCEA3-203ENST00000450454 CNTNAP4Q9C0A0 1308 aa15.56■□□□□ 0.08
TCEA3-203ENST00000450454 COL3A1P02461 1466 aaPredicted RBP15.56■□□□□ 0.08
TCEA3-203ENST00000450454 MTHFSDQ2M296 383 aaKnown RBP15.55■□□□□ 0.08
TCEA3-203ENST00000450454 TRAPPC3LQ5T215 181 aa15.55■□□□□ 0.08
TCEA3-203ENST00000450454 SLC52A2Q9HAB3 445 aa15.55■□□□□ 0.08
TCEA3-203ENST00000450454 SCN11AQ9UI33 1791 aa15.54■□□□□ 0.08
TCEA3-203ENST00000450454 RNMTO43148 476 aaKnown RBP15.54■□□□□ 0.08
TCEA3-203ENST00000450454 ADRA2BP18089 450 aa15.54■□□□□ 0.08
TCEA3-203ENST00000450454 CFAP53Q96M91 514 aa15.54■□□□□ 0.08
TCEA3-203ENST00000450454 LGR6Q9HBX8 967 aa15.54■□□□□ 0.08
TCEA3-203ENST00000450454 FAM9BQ8IZU0 186 aa15.53■□□□□ 0.08
TCEA3-203ENST00000450454 PNISRQ8TF01 805 aaKnown RBP15.53■□□□□ 0.08
TCEA3-203ENST00000450454 RPS6KA4O75676 772 aa15.53■□□□□ 0.08
TCEA3-203ENST00000450454 COL5A3P25940 1745 aaPredicted RBP15.52■□□□□ 0.08
TCEA3-203ENST00000450454 MRC1P22897 1456 aa15.52■□□□□ 0.08
TCEA3-203ENST00000450454 GRIN3BO60391 1043 aa15.51■□□□□ 0.07
TCEA3-203ENST00000450454 RFC4P35249 363 aa15.51■□□□□ 0.07
TCEA3-203ENST00000450454 CRKLP46109 303 aaKnown RBP15.51■□□□□ 0.07
TCEA3-203ENST00000450454 NLGN1Q8N2Q7 840 aa15.51■□□□□ 0.07
TCEA3-203ENST00000450454 ARHGEF1Q92888 912 aaKnown RBP15.51■□□□□ 0.07
TCEA3-203ENST00000450454 GOLGB1Q14789 3259 aaKnown RBP15.51■□□□□ 0.07
TCEA3-203ENST00000450454 HNRNPUQ00839 825 aaKnown RBP eCLIP15.5■□□□□ 0.078e-7■■■■□ 19.9
TCEA3-203ENST00000450454 GAS2L2Q8NHY3 880 aa15.5■□□□□ 0.07
TCEA3-203ENST00000450454 NUDCQ9Y266 331 aa15.5■□□□□ 0.07
TCEA3-203ENST00000450454 CHD4Q14839 1912 aa15.5■□□□□ 0.07
TCEA3-203ENST00000450454 MMP10P09238 476 aa15.49■□□□□ 0.07
TCEA3-203ENST00000450454 PPP2R1AP30153 589 aa15.49■□□□□ 0.07
TCEA3-203ENST00000450454 YBX3P16989 372 aaKnown RBP eCLIP15.49■□□□□ 0.07
TCEA3-203ENST00000450454 SLC39A6Q13433 755 aa15.49■□□□□ 0.07
TCEA3-203ENST00000450454 CICQ96RK0 1608 aaPredicted RBP15.49■□□□□ 0.07
TCEA3-203ENST00000450454 ADAMTS7Q9UKP4 1686 aa15.49■□□□□ 0.07
TCEA3-203ENST00000450454 GNAT3A8MTJ3 354 aa15.48■□□□□ 0.07
TCEA3-203ENST00000450454 ZNF784Q8NCA9 323 aaPredicted RBP15.48■□□□□ 0.07
TCEA3-203ENST00000450454 TJP1Q07157 1748 aa15.47■□□□□ 0.07
TCEA3-203ENST00000450454 GYS1P13807 737 aa15.47■□□□□ 0.07
TCEA3-203ENST00000450454 TEFQ10587 303 aa15.47■□□□□ 0.07
TCEA3-203ENST00000450454 DNAJC10Q8IXB1 793 aa15.47■□□□□ 0.07
TCEA3-203ENST00000450454 MYH14Q7Z406 1995 aaKnown RBP15.47■□□□□ 0.07
TCEA3-203ENST00000450454 PRKAR2BP31323 418 aa15.46■□□□□ 0.07
TCEA3-203ENST00000450454 TTC5Q8N0Z6 440 aa15.46■□□□□ 0.07
TCEA3-203ENST00000450454 RSPH6AQ9H0K4 717 aa15.46■□□□□ 0.07
TCEA3-203ENST00000450454 CCDC87Q9NVE4 849 aa15.46■□□□□ 0.07
TCEA3-203ENST00000450454 U2AF1L5P0DN76 240 aaPredicted RBP15.45■□□□□ 0.06
TCEA3-203ENST00000450454 U2AF1Q01081 240 aaKnown RBP eCLIP15.45■□□□□ 0.06
TCEA3-203ENST00000450454 INTS5Q6P9B9 1019 aaKnown RBP15.45■□□□□ 0.06
TCEA3-203ENST00000450454 VSIG10Q8N0Z9 540 aa15.45■□□□□ 0.06
TCEA3-203ENST00000450454 KCPQ6ZWJ8 1503 aa15.45■□□□□ 0.06
TCEA3-203ENST00000450454 VIRMAQ69YN4 1812 aaKnown RBP15.45■□□□□ 0.06
TCEA3-203ENST00000450454 CYP19A1P11511 503 aaPredicted RBP15.45■□□□□ 0.06
TCEA3-203ENST00000450454 IL17REQ8NFR9 667 aa15.45■□□□□ 0.06
TCEA3-203ENST00000450454 PHACTR3Q96KR7 559 aa15.45■□□□□ 0.06
TCEA3-203ENST00000450454 PARP3Q9Y6F1 533 aa15.45■□□□□ 0.06
TCEA3-203ENST00000450454 ZBED9Q6R2W3 1325 aa15.44■□□□□ 0.06
TCEA3-203ENST00000450454 USP42Q9H9J4 1324 aaKnown RBP15.44■□□□□ 0.06
TCEA3-203ENST00000450454 C4AP0C0L4 1744 aa15.44■□□□□ 0.06
TCEA3-203ENST00000450454 FCHSD2O94868 740 aa15.43■□□□□ 0.06
TCEA3-203ENST00000450454 SRP68Q9UHB9 627 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms