RNA–Protein interactions for RNA: ENST00000450364.3

SMARCD2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-204ENST00000450364 SLC16A10Q8TF71 515 aa18.59■□□□□ 0.57
SMARCD2-204ENST00000450364 COL5A3P25940 1745 aaPredicted RBP18.59■□□□□ 0.57
SMARCD2-204ENST00000450364 GOLGB1Q14789 3259 aaKnown RBP18.58■□□□□ 0.57
SMARCD2-204ENST00000450364 ARXQ96QS3 562 aa18.58■□□□□ 0.56
SMARCD2-204ENST00000450364 SYT17Q9BSW7 474 aa18.58■□□□□ 0.56
SMARCD2-204ENST00000450364 DIAPH1O60610 1272 aaKnown RBP18.57■□□□□ 0.56
SMARCD2-204ENST00000450364 MAP3K5Q99683 1374 aa18.56■□□□□ 0.56
SMARCD2-204ENST00000450364 HSP90AB1P08238 724 aaKnown RBP18.56■□□□□ 0.56
SMARCD2-204ENST00000450364 MRC1P22897 1456 aa18.56■□□□□ 0.56
SMARCD2-204ENST00000450364 TJP1Q07157 1748 aa18.55■□□□□ 0.56
SMARCD2-204ENST00000450364 MTHFSDQ2M296 383 aaKnown RBP18.55■□□□□ 0.56
SMARCD2-204ENST00000450364 MSL1Q68DK7 614 aa18.55■□□□□ 0.56
SMARCD2-204ENST00000450364 LGR6Q9HBX8 967 aa18.55■□□□□ 0.56
SMARCD2-204ENST00000450364 CICQ96RK0 1608 aaPredicted RBP18.53■□□□□ 0.56
SMARCD2-204ENST00000450364 ATP6V1AP38606 617 aa18.53■□□□□ 0.56
SMARCD2-204ENST00000450364 CABP4P57796 275 aa18.53■□□□□ 0.56
SMARCD2-204ENST00000450364 AKAP4Q5JQC9 854 aa18.53■□□□□ 0.56
SMARCD2-204ENST00000450364 C1orf141Q5JVX7 400 aa18.53■□□□□ 0.56
SMARCD2-204ENST00000450364 NFATC2IPQ8NCF5 419 aa18.53■□□□□ 0.56
SMARCD2-204ENST00000450364 MYH14Q7Z406 1995 aaKnown RBP18.53■□□□□ 0.56
SMARCD2-204ENST00000450364 PPP2R1AP30153 589 aa18.52■□□□□ 0.56
SMARCD2-204ENST00000450364 AK7Q96M32 723 aa18.52■□□□□ 0.56
SMARCD2-204ENST00000450364 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.51■□□□□ 0.55
SMARCD2-204ENST00000450364 MSH5O43196 834 aa18.51■□□□□ 0.55
SMARCD2-204ENST00000450364 PHF14O94880 888 aa18.51■□□□□ 0.55
SMARCD2-204ENST00000450364 RNMTO43148 476 aaKnown RBP18.5■□□□□ 0.55
SMARCD2-204ENST00000450364 NLGN2Q8NFZ4 835 aa18.5■□□□□ 0.55
SMARCD2-204ENST00000450364 RBM42Q9BTD8 480 aaKnown RBP18.5■□□□□ 0.55
SMARCD2-204ENST00000450364 KCPQ6ZWJ8 1503 aa18.49■□□□□ 0.55
SMARCD2-204ENST00000450364 SIPA1L3O60292 1781 aaPredicted RBP18.48■□□□□ 0.55
SMARCD2-204ENST00000450364 U2SURPO15042 1029 aaKnown RBP18.48■□□□□ 0.55
SMARCD2-204ENST00000450364 GNPATO15228 680 aa18.48■□□□□ 0.55
SMARCD2-204ENST00000450364 SSFA2P28290 1259 aa18.48■□□□□ 0.55
SMARCD2-204ENST00000450364 POLD1P28340 1107 aa18.48■□□□□ 0.55
SMARCD2-204ENST00000450364 FLAD1Q8NFF5 587 aa18.48■□□□□ 0.55
SMARCD2-204ENST00000450364 SLC52A2Q9HAB3 445 aa18.48■□□□□ 0.55
SMARCD2-204ENST00000450364 C4AP0C0L4 1744 aa18.48■□□□□ 0.55
SMARCD2-204ENST00000450364 PTCD1O75127 700 aaKnown RBP18.47■□□□□ 0.55
SMARCD2-204ENST00000450364 PHACTR3Q96KR7 559 aa18.47■□□□□ 0.55
SMARCD2-204ENST00000450364 RSPH6AQ9H0K4 717 aa18.47■□□□□ 0.55
SMARCD2-204ENST00000450364 UBR2Q8IWV8 1755 aa18.47■□□□□ 0.55
SMARCD2-204ENST00000450364 CNTNAP4Q9C0A0 1308 aa18.46■□□□□ 0.55
SMARCD2-204ENST00000450364 SLC39A6Q13433 755 aa18.45■□□□□ 0.54
SMARCD2-204ENST00000450364 RC3H1Q5TC82 1133 aaKnown RBP18.44■□□□□ 0.54
SMARCD2-204ENST00000450364 KLHL34Q8N239 644 aa18.44■□□□□ 0.54
SMARCD2-204ENST00000450364 IL17REQ8NFR9 667 aa18.44■□□□□ 0.54
SMARCD2-204ENST00000450364 HMGB2P26583 209 aaKnown RBP18.43■□□□□ 0.54
SMARCD2-204ENST00000450364 PRKAR2BP31323 418 aa18.43■□□□□ 0.54
SMARCD2-204ENST00000450364 INTS5Q6P9B9 1019 aaKnown RBP18.42■□□□□ 0.54
SMARCD2-204ENST00000450364 ARHGEF1Q92888 912 aaKnown RBP18.42■□□□□ 0.54
SMARCD2-204ENST00000450364 KIAA1551Q9HCM1 1747 aa18.41■□□□□ 0.54
SMARCD2-204ENST00000450364 RPS6KA4O75676 772 aa18.41■□□□□ 0.54
SMARCD2-204ENST00000450364 CRKLP46109 303 aaKnown RBP18.41■□□□□ 0.54
SMARCD2-204ENST00000450364 DNAJC10Q8IXB1 793 aa18.41■□□□□ 0.54
SMARCD2-204ENST00000450364 YY1P25490 414 aa18.4■□□□□ 0.54
SMARCD2-204ENST00000450364 CFAP53Q96M91 514 aa18.4■□□□□ 0.54
SMARCD2-204ENST00000450364 RTCBQ9Y3I0 505 aaKnown RBP18.4■□□□□ 0.54
SMARCD2-204ENST00000450364 CEMIPQ8WUJ3 1361 aa18.4■□□□□ 0.54
SMARCD2-204ENST00000450364 YBX3P16989 372 aaKnown RBP eCLIP18.39■□□□□ 0.535e-9■□□□□ 10.9
SMARCD2-204ENST00000450364 KIF13BQ9NQT8 1826 aa18.38■□□□□ 0.53
SMARCD2-204ENST00000450364 GNAT3A8MTJ3 354 aa18.38■□□□□ 0.53
SMARCD2-204ENST00000450364 GYS1P13807 737 aa18.38■□□□□ 0.53
SMARCD2-204ENST00000450364 TRAPPC3LQ5T215 181 aa18.38■□□□□ 0.53
SMARCD2-204ENST00000450364 GAS2L2Q8NHY3 880 aa18.38■□□□□ 0.53
SMARCD2-204ENST00000450364 U2AF1L5P0DN76 240 aaPredicted RBP18.37■□□□□ 0.53
SMARCD2-204ENST00000450364 CYP19A1P11511 503 aaPredicted RBP18.37■□□□□ 0.53
SMARCD2-204ENST00000450364 U2AF1Q01081 240 aaKnown RBP eCLIP18.37■□□□□ 0.53
SMARCD2-204ENST00000450364 SRP68Q9UHB9 627 aaKnown RBP18.37■□□□□ 0.53
SMARCD2-204ENST00000450364 CD2APQ9Y5K6 639 aa18.37■□□□□ 0.53
SMARCD2-204ENST00000450364 CHD4Q14839 1912 aa18.37■□□□□ 0.53
SMARCD2-204ENST00000450364 MMP10P09238 476 aa18.36■□□□□ 0.53
SMARCD2-204ENST00000450364 ADRA2BP18089 450 aa18.36■□□□□ 0.53
SMARCD2-204ENST00000450364 DCAF8L1A6NGE4 600 aa18.35■□□□□ 0.53
SMARCD2-204ENST00000450364 KCNQ3O43525 872 aa18.35■□□□□ 0.53
SMARCD2-204ENST00000450364 NUDCQ9Y266 331 aa18.35■□□□□ 0.53
SMARCD2-204ENST00000450364 SOS1Q07889 1333 aaPredicted RBP18.34■□□□□ 0.53
SMARCD2-204ENST00000450364 DLG5Q8TDM6 1919 aa18.34■□□□□ 0.53
SMARCD2-204ENST00000450364 FCHSD2O94868 740 aa18.34■□□□□ 0.53
SMARCD2-204ENST00000450364 DDX10Q13206 875 aaKnown RBP18.34■□□□□ 0.53
SMARCD2-204ENST00000450364 GPR162Q16538 588 aa18.34■□□□□ 0.53
SMARCD2-204ENST00000450364 ZNF496Q96IT1 587 aaPredicted RBP18.34■□□□□ 0.53
SMARCD2-204ENST00000450364 CCDC87Q9NVE4 849 aa18.34■□□□□ 0.53
SMARCD2-204ENST00000450364 USP42Q9H9J4 1324 aaKnown RBP18.33■□□□□ 0.53
SMARCD2-204ENST00000450364 PLEKHF1Q96S99 279 aa18.33■□□□□ 0.52
SMARCD2-204ENST00000450364 ZBTB1Q9Y2K1 713 aa18.33■□□□□ 0.52
SMARCD2-204ENST00000450364 C10orf71Q711Q0 1435 aa18.32■□□□□ 0.52
SMARCD2-204ENST00000450364 N4BP2Q86UW6 1770 aaPredicted RBP18.32■□□□□ 0.52
SMARCD2-204ENST00000450364 RFC4P35249 363 aa18.32■□□□□ 0.52
SMARCD2-204ENST00000450364 DCTN1Q14203 1278 aa18.32■□□□□ 0.52
SMARCD2-204ENST00000450364 FKBP8Q14318 412 aa18.32■□□□□ 0.52
SMARCD2-204ENST00000450364 ZNF790Q6PG37 636 aa18.32■□□□□ 0.52
SMARCD2-204ENST00000450364 MCM10Q7L590 875 aa18.32■□□□□ 0.52
SMARCD2-204ENST00000450364 PELP1Q8IZL8 1130 aaKnown RBP18.32■□□□□ 0.52
SMARCD2-204ENST00000450364 VSIG10Q8N0Z9 540 aa18.32■□□□□ 0.52
SMARCD2-204ENST00000450364 PXDNLA1KZ92 1463 aa18.32■□□□□ 0.52
SMARCD2-204ENST00000450364 HEG1Q9ULI3 1381 aa18.31■□□□□ 0.52
SMARCD2-204ENST00000450364 DDR1Q08345 913 aa18.3■□□□□ 0.52
SMARCD2-204ENST00000450364 TEFQ10587 303 aa18.3■□□□□ 0.52
SMARCD2-204ENST00000450364 NLGN1Q8N2Q7 840 aa18.3■□□□□ 0.52
SMARCD2-204ENST00000450364 BCL2L12Q9HB09 334 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms