RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 C5P01031 1676 aa29.68■■■□□ 2.34
CPSF7-208ENST00000450000 DIAPH1O60610 1272 aaKnown RBP29.67■■■□□ 2.34
CPSF7-208ENST00000450000 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.66■■■□□ 2.34
CPSF7-208ENST00000450000 GNPATO15228 680 aa29.66■■■□□ 2.34
CPSF7-208ENST00000450000 LINC00116Q8NCU8 138 aa29.66■■■□□ 2.34
CPSF7-208ENST00000450000 SSFA2P28290 1259 aa29.65■■■□□ 2.34
CPSF7-208ENST00000450000 HMOX1P09601 288 aa29.63■■■□□ 2.33
CPSF7-208ENST00000450000 TUBGCP6Q96RT7 1819 aa29.63■■■□□ 2.33
CPSF7-208ENST00000450000 ITPK1Q13572 414 aa29.62■■■□□ 2.33
CPSF7-208ENST00000450000 KDRP35968 1356 aa29.62■■■□□ 2.33
CPSF7-208ENST00000450000 C4BP0C0L5 1744 aa29.62■■■□□ 2.33
CPSF7-208ENST00000450000 AKAP4Q5JQC9 854 aa29.61■■■□□ 2.33
CPSF7-208ENST00000450000 NFATC2IPQ8NCF5 419 aa29.6■■■□□ 2.33
CPSF7-208ENST00000450000 RTCBQ9Y3I0 505 aaKnown RBP29.59■■■□□ 2.33
CPSF7-208ENST00000450000 U2SURPO15042 1029 aaKnown RBP29.58■■■□□ 2.33
CPSF7-208ENST00000450000 KDM6AO15550 1401 aaPredicted RBP29.58■■■□□ 2.33
CPSF7-208ENST00000450000 SMIM5Q71RC9 77 aa29.58■■■□□ 2.33
CPSF7-208ENST00000450000 NPC1L1Q9UHC9 1359 aa29.58■■■□□ 2.33
CPSF7-208ENST00000450000 PTCD1O75127 700 aaKnown RBP29.57■■■□□ 2.32
CPSF7-208ENST00000450000 TRAPPC3LQ5T215 181 aa29.57■■■□□ 2.32
CPSF7-208ENST00000450000 NLGN2Q8NFZ4 835 aa29.57■■■□□ 2.32
CPSF7-208ENST00000450000 TAF1LQ8IZX4 1826 aa29.56■■■□□ 2.32
CPSF7-208ENST00000450000 CFAP53Q96M91 514 aa29.55■■■□□ 2.32
CPSF7-208ENST00000450000 CD2APQ9Y5K6 639 aa29.55■■■□□ 2.32
CPSF7-208ENST00000450000 AMIGO3Q86WK7 504 aa29.54■■■□□ 2.32
CPSF7-208ENST00000450000 RC3H1Q5TC82 1133 aaKnown RBP29.52■■■□□ 2.32
CPSF7-208ENST00000450000 GRIN3BO60391 1043 aa29.51■■■□□ 2.31
CPSF7-208ENST00000450000 RFC4P35249 363 aa29.5■■■□□ 2.31
CPSF7-208ENST00000450000 SLC4A9Q96Q91 983 aa29.5■■■□□ 2.31
CPSF7-208ENST00000450000 COL24A1Q17RW2 1714 aa29.5■■■□□ 2.31
CPSF7-208ENST00000450000 ADRA2BP18089 450 aa29.49■■■□□ 2.31
CPSF7-208ENST00000450000 MTHFSDQ2M296 383 aaKnown RBP29.49■■■□□ 2.31
CPSF7-208ENST00000450000 SLC52A2Q9HAB3 445 aa29.49■■■□□ 2.31
CPSF7-208ENST00000450000 CNTNAP4Q9C0A0 1308 aa29.48■■■□□ 2.31
CPSF7-208ENST00000450000 RNMTO43148 476 aaKnown RBP29.48■■■□□ 2.31
CPSF7-208ENST00000450000 RPS6KA4O75676 772 aa29.47■■■□□ 2.31
CPSF7-208ENST00000450000 NLGN1Q8N2Q7 840 aa29.47■■■□□ 2.31
CPSF7-208ENST00000450000 LGR6Q9HBX8 967 aa29.47■■■□□ 2.31
CPSF7-208ENST00000450000 NUDCQ9Y266 331 aa29.47■■■□□ 2.31
CPSF7-208ENST00000450000 UBR3Q6ZT12 1888 aa29.45■■■□□ 2.31
CPSF7-208ENST00000450000 GAS2L2Q8NHY3 880 aa29.45■■■□□ 2.31
CPSF7-208ENST00000450000 ARHGEF1Q92888 912 aaKnown RBP29.45■■■□□ 2.31
CPSF7-208ENST00000450000 MMP10P09238 476 aa29.43■■■□□ 2.3
CPSF7-208ENST00000450000 CRKLP46109 303 aaKnown RBP29.42■■■□□ 2.3
CPSF7-208ENST00000450000 ZNF784Q8NCA9 323 aaPredicted RBP29.42■■■□□ 2.3
CPSF7-208ENST00000450000 TEFQ10587 303 aa29.4■■■□□ 2.3
CPSF7-208ENST00000450000 TTC5Q8N0Z6 440 aa29.4■■■□□ 2.3
CPSF7-208ENST00000450000 YBX3P16989 372 aaKnown RBP eCLIP29.39■■■□□ 2.33e-7■■□□□ 12.8
CPSF7-208ENST00000450000 SLC39A6Q13433 755 aa29.39■■■□□ 2.3
CPSF7-208ENST00000450000 PARP3Q9Y6F1 533 aa29.39■■■□□ 2.3
CPSF7-208ENST00000450000 GNAT3A8MTJ3 354 aa29.38■■■□□ 2.29
CPSF7-208ENST00000450000 DNAJC10Q8IXB1 793 aa29.37■■■□□ 2.29
CPSF7-208ENST00000450000 ZNF831Q5JPB2 1677 aa29.37■■■□□ 2.29
CPSF7-208ENST00000450000 U2AF1L5P0DN76 240 aaPredicted RBP29.36■■■□□ 2.29
CPSF7-208ENST00000450000 PPP2R1AP30153 589 aa29.36■■■□□ 2.29
CPSF7-208ENST00000450000 U2AF1Q01081 240 aaKnown RBP eCLIP29.36■■■□□ 2.29
CPSF7-208ENST00000450000 CCDC87Q9NVE4 849 aa29.36■■■□□ 2.29
CPSF7-208ENST00000450000 COL3A1P02461 1466 aaPredicted RBP29.36■■■□□ 2.29
CPSF7-208ENST00000450000 WWC3Q9ULE0 1092 aa29.35■■■□□ 2.29
CPSF7-208ENST00000450000 GYS1P13807 737 aa29.34■■■□□ 2.29
CPSF7-208ENST00000450000 PRKAR2BP31323 418 aa29.34■■■□□ 2.29
CPSF7-208ENST00000450000 SCN11AQ9UI33 1791 aa29.34■■■□□ 2.29
CPSF7-208ENST00000450000 ZPR1O75312 459 aa29.33■■■□□ 2.29
CPSF7-208ENST00000450000 CHD4Q14839 1912 aa29.31■■■□□ 2.28
CPSF7-208ENST00000450000 NEFMP07197 916 aa29.3■■■□□ 2.28
CPSF7-208ENST00000450000 INTS5Q6P9B9 1019 aaKnown RBP29.3■■■□□ 2.28
CPSF7-208ENST00000450000 VSIG10Q8N0Z9 540 aa29.3■■■□□ 2.28
CPSF7-208ENST00000450000 RTF1Q92541 710 aaKnown RBP29.3■■■□□ 2.28
CPSF7-208ENST00000450000 SRP68Q9UHB9 627 aaKnown RBP29.3■■■□□ 2.28
CPSF7-208ENST00000450000 MRC1P22897 1456 aa29.29■■■□□ 2.28
CPSF7-208ENST00000450000 STARD3NLO95772 234 aa29.29■■■□□ 2.28
CPSF7-208ENST00000450000 TGFB2P61812 414 aa29.29■■■□□ 2.28
CPSF7-208ENST00000450000 COL5A3P25940 1745 aaPredicted RBP29.28■■■□□ 2.28
CPSF7-208ENST00000450000 USP42Q9H9J4 1324 aaKnown RBP29.28■■■□□ 2.28
CPSF7-208ENST00000450000 CYP19A1P11511 503 aaPredicted RBP29.28■■■□□ 2.28
CPSF7-208ENST00000450000 IL17REQ8NFR9 667 aa29.28■■■□□ 2.28
CPSF7-208ENST00000450000 RSPH6AQ9H0K4 717 aa29.28■■■□□ 2.28
CPSF7-208ENST00000450000 FCHSD2O94868 740 aa29.26■■■□□ 2.27
CPSF7-208ENST00000450000 PHACTR3Q96KR7 559 aa29.26■■■□□ 2.27
CPSF7-208ENST00000450000 FKBP8Q14318 412 aa29.25■■■□□ 2.27
CPSF7-208ENST00000450000 NPM2Q86SE8 214 aaKnown RBP29.25■■■□□ 2.27
CPSF7-208ENST00000450000 TEX13AQ9BXU3 409 aaPredicted RBP29.25■■■□□ 2.27
CPSF7-208ENST00000450000 CICQ96RK0 1608 aaPredicted RBP29.24■■■□□ 2.27
CPSF7-208ENST00000450000 CANXP27824 592 aaKnown RBP29.24■■■□□ 2.27
CPSF7-208ENST00000450000 ZNF790Q6PG37 636 aa29.24■■■□□ 2.27
CPSF7-208ENST00000450000 UTRNP46939 3433 aa29.24■■■□□ 2.27
CPSF7-208ENST00000450000 SOS1Q07889 1333 aaPredicted RBP29.23■■■□□ 2.27
CPSF7-208ENST00000450000 USPL1Q5W0Q7 1092 aa29.23■■■□□ 2.27
CPSF7-208ENST00000450000 A0A0G2JLW4 131 aa29.22■■■□□ 2.27
CPSF7-208ENST00000450000 BTBD11A6QL63 1104 aa29.22■■■□□ 2.27
CPSF7-208ENST00000450000 FMNL2Q96PY5 1086 aa29.22■■■□□ 2.27
CPSF7-208ENST00000450000 BCS1LQ9Y276 419 aa29.22■■■□□ 2.27
CPSF7-208ENST00000450000 ZBTB1Q9Y2K1 713 aa29.22■■■□□ 2.27
CPSF7-208ENST00000450000 TJP1Q07157 1748 aa29.21■■■□□ 2.27
CPSF7-208ENST00000450000 ZNF496Q96IT1 587 aaPredicted RBP29.2■■■□□ 2.26
CPSF7-208ENST00000450000 NARFQ9UHQ1 456 aa29.2■■■□□ 2.26
CPSF7-208ENST00000450000 MYH14Q7Z406 1995 aaKnown RBP29.2■■■□□ 2.26
CPSF7-208ENST00000450000 KCPQ6ZWJ8 1503 aa29.2■■■□□ 2.26
CPSF7-208ENST00000450000 COL15A1P39059 1388 aa29.19■■■□□ 2.26
CPSF7-208ENST00000450000 A0A087WZG4 1122 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms