RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 TIGD1Q96MW7 591 aa16.37■□□□□ 0.21
ITGB4-202ENST00000449880 C1orf115Q9H7X2 142 aa16.37■□□□□ 0.21
ITGB4-202ENST00000449880 SHTN1A0MZ66 631 aa16.37■□□□□ 0.21
ITGB4-202ENST00000449880 TBC1D32Q96NH3 1257 aa16.37■□□□□ 0.21
ITGB4-202ENST00000449880 INCENPQ9NQS7 918 aa16.37■□□□□ 0.21
ITGB4-202ENST00000449880 HSP90AB3PQ58FF7 597 aa16.36■□□□□ 0.21
ITGB4-202ENST00000449880 UPF3BQ9BZI7 483 aaKnown RBP16.36■□□□□ 0.21
ITGB4-202ENST00000449880 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.36■□□□□ 0.21
ITGB4-202ENST00000449880 CAVIN2O95810 425 aa16.36■□□□□ 0.21
ITGB4-202ENST00000449880 DDX11Q96FC9 970 aa16.36■□□□□ 0.21
ITGB4-202ENST00000449880 ODF2Q5BJF6 829 aa16.36■□□□□ 0.21
ITGB4-202ENST00000449880 CTAGE5O15320 804 aa16.35■□□□□ 0.21
ITGB4-202ENST00000449880 SLC4A2P04920 1241 aa16.35■□□□□ 0.21
ITGB4-202ENST00000449880 DNAJC2Q99543 621 aaKnown RBP16.35■□□□□ 0.21
ITGB4-202ENST00000449880 FYB1O15117 783 aa16.35■□□□□ 0.21
ITGB4-202ENST00000449880 GSDMDP57764 484 aa16.35■□□□□ 0.21
ITGB4-202ENST00000449880 KRT32Q14532 448 aa16.35■□□□□ 0.21
ITGB4-202ENST00000449880 TXLNAP40222 546 aa16.35■□□□□ 0.21
ITGB4-202ENST00000449880 BMS1Q14692 1282 aaKnown RBP16.35■□□□□ 0.21
ITGB4-202ENST00000449880 ABCC11Q96J66 1382 aa16.35■□□□□ 0.21
ITGB4-202ENST00000449880 KIF6Q6ZMV9 814 aa16.35■□□□□ 0.21
ITGB4-202ENST00000449880 PHF23Q9BUL5 403 aaPredicted RBP16.35■□□□□ 0.21
ITGB4-202ENST00000449880 WASLO00401 505 aaPredicted RBP16.34■□□□□ 0.21
ITGB4-202ENST00000449880 SURF6O75683 361 aaKnown RBP16.34■□□□□ 0.21
ITGB4-202ENST00000449880 BCL11BQ9C0K0 894 aaPredicted RBP16.34■□□□□ 0.21
ITGB4-202ENST00000449880 PDRG1Q9NUG6 133 aa16.34■□□□□ 0.21
ITGB4-202ENST00000449880 OFD1O75665 1012 aa16.34■□□□□ 0.21
ITGB4-202ENST00000449880 FOSBP53539 338 aa16.34■□□□□ 0.21
ITGB4-202ENST00000449880 CCDC102AQ96A19 550 aa16.34■□□□□ 0.21
ITGB4-202ENST00000449880 SCAND2PQ9GZW5 306 aaPredicted RBP16.34■□□□□ 0.21
ITGB4-202ENST00000449880 SLC3A2P08195 630 aaKnown RBP16.34■□□□□ 0.21
ITGB4-202ENST00000449880 IKQ13123 557 aaPredicted RBP16.34■□□□□ 0.21
ITGB4-202ENST00000449880 SMAP1Q8IYB5 467 aaPredicted RBP16.34■□□□□ 0.21
ITGB4-202ENST00000449880 GCC2Q8IWJ2 1684 aa16.34■□□□□ 0.21
ITGB4-202ENST00000449880 ABCC10Q5T3U5 1492 aa16.33■□□□□ 0.21
ITGB4-202ENST00000449880 SFPQP23246 707 aaKnown RBP eCLIP16.33■□□□□ 0.21
ITGB4-202ENST00000449880 ANO10Q9NW15 660 aa16.33■□□□□ 0.21
ITGB4-202ENST00000449880 ASXL1Q8IXJ9 1541 aa16.33■□□□□ 0.21
ITGB4-202ENST00000449880 ME1P48163 572 aa16.33■□□□□ 0.2
ITGB4-202ENST00000449880 CCDC181Q5TID7 509 aa16.33■□□□□ 0.2
ITGB4-202ENST00000449880 MICALCLQ6ZW33 695 aa16.33■□□□□ 0.2
ITGB4-202ENST00000449880 CCDC148Q8NFR7 591 aa16.33■□□□□ 0.2
ITGB4-202ENST00000449880 ALDH1L2Q3SY69 923 aa16.33■□□□□ 0.2
ITGB4-202ENST00000449880 FMNL2Q96PY5 1086 aa16.33■□□□□ 0.2
ITGB4-202ENST00000449880 TNNT1P13805 278 aa16.33■□□□□ 0.2
ITGB4-202ENST00000449880 EPS15P42566 896 aa16.32■□□□□ 0.2
ITGB4-202ENST00000449880 SH2B1Q9NRF2 756 aaPredicted RBP16.32■□□□□ 0.2
ITGB4-202ENST00000449880 NME9Q86XW9 330 aa16.32■□□□□ 0.2
ITGB4-202ENST00000449880 GOLGA6L9A6NEM1 432 aa16.32■□□□□ 0.2
ITGB4-202ENST00000449880 KRT222Q8N1A0 295 aa16.32■□□□□ 0.2
ITGB4-202ENST00000449880 CCDC94Q9BW85 323 aaPredicted RBP16.32■□□□□ 0.2
ITGB4-202ENST00000449880 TUBB4AP04350 444 aa16.32■□□□□ 0.2
ITGB4-202ENST00000449880 CCDC171Q6TFL3 1326 aa16.32■□□□□ 0.2
ITGB4-202ENST00000449880 TTLL5Q6EMB2 1281 aa16.32■□□□□ 0.2
ITGB4-202ENST00000449880 PARD3Q8TEW0 1356 aa16.31■□□□□ 0.2
ITGB4-202ENST00000449880 XRCC6P12956 609 aaKnown RBP eCLIP16.31■□□□□ 0.2
ITGB4-202ENST00000449880 RARSP54136 660 aaKnown RBP16.31■□□□□ 0.2
ITGB4-202ENST00000449880 C20orf194Q5TEA3 1177 aa16.31■□□□□ 0.2
ITGB4-202ENST00000449880 DUSP27Q5VZP5 1158 aa16.31■□□□□ 0.2
ITGB4-202ENST00000449880 STIM1Q13586 685 aa16.31■□□□□ 0.2
ITGB4-202ENST00000449880 LRSAM1Q6UWE0 723 aa16.31■□□□□ 0.2
ITGB4-202ENST00000449880 SSFA2P28290 1259 aa16.31■□□□□ 0.2
ITGB4-202ENST00000449880 DDX19AQ9NUU7 478 aaKnown RBP16.31■□□□□ 0.2
ITGB4-202ENST00000449880 UHRF1BP1Q6BDS2 1440 aa16.3■□□□□ 0.2
ITGB4-202ENST00000449880 TATP17735 454 aaPredicted RBP16.3■□□□□ 0.2
ITGB4-202ENST00000449880 CRACR2AQ9BSW2 395 aa16.3■□□□□ 0.2
ITGB4-202ENST00000449880 BLOC1S2Q6QNY1 142 aa16.3■□□□□ 0.2
ITGB4-202ENST00000449880 ADGBQ8N7X0 1667 aa16.3■□□□□ 0.2
ITGB4-202ENST00000449880 GNL3LQ9NVN8 582 aaKnown RBP16.3■□□□□ 0.2
ITGB4-202ENST00000449880 BAG4O95429 457 aaKnown RBP16.3■□□□□ 0.2
ITGB4-202ENST00000449880 HDGFL1Q5TGJ6 251 aa16.3■□□□□ 0.2
ITGB4-202ENST00000449880 MAST1Q9Y2H9 1570 aa16.29■□□□□ 0.2
ITGB4-202ENST00000449880 TEX14Q8IWB6 1497 aa16.29■□□□□ 0.2
ITGB4-202ENST00000449880 CASQ1P31415 396 aa16.29■□□□□ 0.2
ITGB4-202ENST00000449880 TERF1P54274 439 aa16.29■□□□□ 0.2
ITGB4-202ENST00000449880 TESK2Q96S53 571 aa16.29■□□□□ 0.2
ITGB4-202ENST00000449880 RBM42Q9BTD8 480 aaKnown RBP16.29■□□□□ 0.2
ITGB4-202ENST00000449880 CLIP2Q9UDT6 1046 aa16.29■□□□□ 0.2
ITGB4-202ENST00000449880 CDKL5O76039 1030 aa16.29■□□□□ 0.2
ITGB4-202ENST00000449880 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.29■□□□□ 0.2
ITGB4-202ENST00000449880 ZKSCAN5Q9Y2L8 839 aa16.29■□□□□ 0.2
ITGB4-202ENST00000449880 RBM25P49756 843 aaKnown RBP16.28■□□□□ 0.2
ITGB4-202ENST00000449880 ZHX1Q9UKY1 873 aaPredicted RBP16.28■□□□□ 0.2
ITGB4-202ENST00000449880 BMP2KLQ5H9B9 411 aa16.28■□□□□ 0.2
ITGB4-202ENST00000449880 SNX21Q969T3 373 aa16.28■□□□□ 0.2
ITGB4-202ENST00000449880 ANKRD36BQ8N2N9 1353 aa16.28■□□□□ 0.2
ITGB4-202ENST00000449880 TMEM57Q8N5G2 664 aa16.28■□□□□ 0.2
ITGB4-202ENST00000449880 EMILIN1Q9Y6C2 1016 aa16.28■□□□□ 0.2
ITGB4-202ENST00000449880 ZSCAN23Q3MJ62 389 aa16.28■□□□□ 0.2
ITGB4-202ENST00000449880 HSP90AB2PQ58FF8 381 aa16.28■□□□□ 0.2
ITGB4-202ENST00000449880 ZNF530Q6P9A1 599 aaPredicted RBP16.28■□□□□ 0.2
ITGB4-202ENST00000449880 EPB41L2O43491 1005 aaKnown RBP16.28■□□□□ 0.2
ITGB4-202ENST00000449880 IVLP07476 585 aa16.27■□□□□ 0.2
ITGB4-202ENST00000449880 WWC2Q6AWC2 1192 aa16.27■□□□□ 0.2
ITGB4-202ENST00000449880 CCAR1Q8IX12 1150 aaKnown RBP16.27■□□□□ 0.2
ITGB4-202ENST00000449880 ARHGAP29Q52LW3 1261 aa16.27■□□□□ 0.19
ITGB4-202ENST00000449880 CCDC83Q8IWF9 413 aa16.27■□□□□ 0.19
ITGB4-202ENST00000449880 THUMPD2Q9BTF0 503 aaKnown RBP16.27■□□□□ 0.19
ITGB4-202ENST00000449880 ADCY5O95622 1261 aa16.27■□□□□ 0.19
ITGB4-202ENST00000449880 JAKMIP3Q5VZ66 844 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 345.6 ms