RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 NCAPD2Q15021 1401 aa19.15■□□□□ 0.66
CPSF7-207ENST00000449811 C10orf71Q711Q0 1435 aa19.15■□□□□ 0.66
CPSF7-207ENST00000449811 N4BP2Q86UW6 1770 aaPredicted RBP19.14■□□□□ 0.66
CPSF7-207ENST00000449811 TRAPPC3LQ5T215 181 aa19.14■□□□□ 0.65
CPSF7-207ENST00000449811 NLGN1Q8N2Q7 840 aa19.14■□□□□ 0.65
CPSF7-207ENST00000449811 RBM46Q8TBY0 533 aaKnown RBP19.14■□□□□ 0.65
CPSF7-207ENST00000449811 KIF20BQ96Q89 1820 aa19.14■□□□□ 0.65
CPSF7-207ENST00000449811 FCHSD2O94868 740 aa19.13■□□□□ 0.65
CPSF7-207ENST00000449811 TMF1P82094 1093 aa19.13■□□□□ 0.65
CPSF7-207ENST00000449811 RTCBQ9Y3I0 505 aaKnown RBP19.13■□□□□ 0.65
CPSF7-207ENST00000449811 WDR90Q96KV7 1748 aa19.13■□□□□ 0.65
CPSF7-207ENST00000449811 PPM1GO15355 546 aaPredicted RBP19.12■□□□□ 0.65
CPSF7-207ENST00000449811 DPEP1P16444 411 aa19.12■□□□□ 0.65
CPSF7-207ENST00000449811 C16orf71Q8IYS4 520 aaPredicted RBP19.12■□□□□ 0.65
CPSF7-207ENST00000449811 ATG3Q9NT62 314 aa19.12■□□□□ 0.65
CPSF7-207ENST00000449811 CCDC87Q9NVE4 849 aa19.12■□□□□ 0.65
CPSF7-207ENST00000449811 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.12■□□□□ 0.654e-9■■■□□ 15.2
CPSF7-207ENST00000449811 PHKG2P15735 406 aa19.11■□□□□ 0.65
CPSF7-207ENST00000449811 IFNL2Q8IZJ0 200 aa19.11■□□□□ 0.65
CPSF7-207ENST00000449811 KLRG1Q96E93 195 aa19.11■□□□□ 0.65
CPSF7-207ENST00000449811 PLEKHG2Q9H7P9 1386 aa19.1■□□□□ 0.65
CPSF7-207ENST00000449811 HTRA3P83110 453 aa19.1■□□□□ 0.65
CPSF7-207ENST00000449811 COL13A1Q5TAT6 717 aaPredicted RBP19.1■□□□□ 0.65
CPSF7-207ENST00000449811 C9orf131Q5VYM1 1079 aa19.1■□□□□ 0.65
CPSF7-207ENST00000449811 KDRP35968 1356 aa19.09■□□□□ 0.65
CPSF7-207ENST00000449811 ADRA2BP18089 450 aa19.09■□□□□ 0.65
CPSF7-207ENST00000449811 JMYQ8N9B5 988 aa19.09■□□□□ 0.65
CPSF7-207ENST00000449811 ARHGEF1Q92888 912 aaKnown RBP19.09■□□□□ 0.65
CPSF7-207ENST00000449811 PARP3Q9Y6F1 533 aa19.09■□□□□ 0.65
CPSF7-207ENST00000449811 C4AP0C0L4 1744 aa19.08■□□□□ 0.65
CPSF7-207ENST00000449811 FSTL1Q12841 308 aa19.08■□□□□ 0.64
CPSF7-207ENST00000449811 EYA1Q99502 592 aa19.08■□□□□ 0.64
CPSF7-207ENST00000449811 WASHC2AQ641Q2 1341 aa19.07■□□□□ 0.64
CPSF7-207ENST00000449811 GYS1P13807 737 aa19.07■□□□□ 0.64
CPSF7-207ENST00000449811 RFC4P35249 363 aa19.07■□□□□ 0.64
CPSF7-207ENST00000449811 KDM2BQ8NHM5 1336 aa19.06■□□□□ 0.64
CPSF7-207ENST00000449811 SLC4A9Q96Q91 983 aa19.06■□□□□ 0.64
CPSF7-207ENST00000449811 RBM42Q9BTD8 480 aaKnown RBP19.06■□□□□ 0.64
CPSF7-207ENST00000449811 KCPQ6ZWJ8 1503 aa19.05■□□□□ 0.64
CPSF7-207ENST00000449811 BRCA1P38398 1863 aaKnown RBP19.05■□□□□ 0.64
CPSF7-207ENST00000449811 CNTNAP4Q9C0A0 1308 aa19.05■□□□□ 0.64
CPSF7-207ENST00000449811 CAPN15O75808 1086 aa19.05■□□□□ 0.64
CPSF7-207ENST00000449811 KCNA3P22001 575 aa19.05■□□□□ 0.64
CPSF7-207ENST00000449811 CDCA8Q53HL2 280 aa19.05■□□□□ 0.64
CPSF7-207ENST00000449811 RC3H1Q5TC82 1133 aaKnown RBP19.05■□□□□ 0.64
CPSF7-207ENST00000449811 CARD14Q9BXL6 1004 aa19.05■□□□□ 0.64
CPSF7-207ENST00000449811 PIM2Q9P1W9 311 aa19.05■□□□□ 0.64
CPSF7-207ENST00000449811 ANKRD26Q9UPS8 1709 aa19.05■□□□□ 0.64
CPSF7-207ENST00000449811 PCNTO95613 3336 aa19.04■□□□□ 0.64
CPSF7-207ENST00000449811 RPS6KA4O75676 772 aa19.04■□□□□ 0.64
CPSF7-207ENST00000449811 DCAF5Q96JK2 942 aa19.04■□□□□ 0.64
CPSF7-207ENST00000449811 DALRD3Q5D0E6 543 aaKnown RBP19.03■□□□□ 0.64
CPSF7-207ENST00000449811 RNF181Q9P0P0 153 aa19.03■□□□□ 0.64
CPSF7-207ENST00000449811 ZNF831Q5JPB2 1677 aa19.03■□□□□ 0.64
CPSF7-207ENST00000449811 ARFGEF1Q9Y6D6 1849 aa19.02■□□□□ 0.64
CPSF7-207ENST00000449811 ERVV-2B6SEH9 535 aa19.02■□□□□ 0.64
CPSF7-207ENST00000449811 TNS4Q8IZW8 715 aa19.02■□□□□ 0.64
CPSF7-207ENST00000449811 RRAGCQ9HB90 399 aa19.02■□□□□ 0.64
CPSF7-207ENST00000449811 COL5A3P25940 1745 aaPredicted RBP19.01■□□□□ 0.63
CPSF7-207ENST00000449811 HSP90AB1P08238 724 aaKnown RBP18.99■□□□□ 0.63
CPSF7-207ENST00000449811 SMC1BQ8NDV3 1235 aa18.99■□□□□ 0.63
CPSF7-207ENST00000449811 POLKQ9UBT6 870 aa18.99■□□□□ 0.63
CPSF7-207ENST00000449811 PRELPP51888 382 aa18.98■□□□□ 0.63
CPSF7-207ENST00000449811 EIF4A2Q14240 407 aaKnown RBP18.98■□□□□ 0.63
CPSF7-207ENST00000449811 TNRC6CQ9HCJ0 1690 aaKnown RBP18.98■□□□□ 0.63
CPSF7-207ENST00000449811 CABP4P57796 275 aa18.97■□□□□ 0.63
CPSF7-207ENST00000449811 DDR1Q08345 913 aa18.97■□□□□ 0.63
CPSF7-207ENST00000449811 FKBP8Q14318 412 aa18.97■□□□□ 0.63
CPSF7-207ENST00000449811 SRP68Q9UHB9 627 aaKnown RBP18.97■□□□□ 0.63
CPSF7-207ENST00000449811 CHRNA5P30532 468 aa18.96■□□□□ 0.63
CPSF7-207ENST00000449811 USP42Q9H9J4 1324 aaKnown RBP18.96■□□□□ 0.63
CPSF7-207ENST00000449811 MYH14Q7Z406 1995 aaKnown RBP18.95■□□□□ 0.62
CPSF7-207ENST00000449811 KDM6AO15550 1401 aaPredicted RBP18.95■□□□□ 0.62
CPSF7-207ENST00000449811 PTCD1O75127 700 aaKnown RBP18.95■□□□□ 0.62
CPSF7-207ENST00000449811 CRKLP46109 303 aaKnown RBP18.95■□□□□ 0.62
CPSF7-207ENST00000449811 PLEKHO1Q53GL0 409 aaPredicted RBP18.94■□□□□ 0.62
CPSF7-207ENST00000449811 ZC3H4Q9UPT8 1303 aaKnown RBP18.94■□□□□ 0.62
CPSF7-207ENST00000449811 ZNF530Q6P9A1 599 aaPredicted RBP18.93■□□□□ 0.62
CPSF7-207ENST00000449811 POLRMTO00411 1230 aaKnown RBP18.92■□□□□ 0.62
CPSF7-207ENST00000449811 TNNT2P45379 298 aaPredicted RBP18.92■□□□□ 0.62
CPSF7-207ENST00000449811 RASSF7Q02833 373 aa18.92■□□□□ 0.62
CPSF7-207ENST00000449811 SBF1O95248 1867 aa18.91■□□□□ 0.62
CPSF7-207ENST00000449811 HSPA1AP0DMV8 641 aaKnown RBP18.91■□□□□ 0.62
CPSF7-207ENST00000449811 HSPA1BP0DMV9 641 aaKnown RBP18.91■□□□□ 0.62
CPSF7-207ENST00000449811 MTHFSP49914 203 aa18.91■□□□□ 0.62
CPSF7-207ENST00000449811 AMOTQ4VCS5 1084 aa18.91■□□□□ 0.62
CPSF7-207ENST00000449811 VEGFAP15692 232 aaPredicted RBP18.9■□□□□ 0.62
CPSF7-207ENST00000449811 GLTPD2A6NH11 291 aa18.89■□□□□ 0.61
CPSF7-207ENST00000449811 TM4SF1P30408 202 aa18.89■□□□□ 0.61
CPSF7-207ENST00000449811 ZPR1O75312 459 aa18.88■□□□□ 0.61
CPSF7-207ENST00000449811 LMNB1P20700 586 aa18.88■□□□□ 0.61
CPSF7-207ENST00000449811 C1orf141Q5JVX7 400 aa18.88■□□□□ 0.61
CPSF7-207ENST00000449811 NFATC2IPQ8NCF5 419 aa18.88■□□□□ 0.61
CPSF7-207ENST00000449811 TJP1Q07157 1748 aa18.87■□□□□ 0.61
CPSF7-207ENST00000449811 USPL1Q5W0Q7 1092 aa18.87■□□□□ 0.61
CPSF7-207ENST00000449811 INTS5Q6P9B9 1019 aaKnown RBP18.87■□□□□ 0.61
CPSF7-207ENST00000449811 ADAMTS7Q9UKP4 1686 aa18.85■□□□□ 0.61
CPSF7-207ENST00000449811 SOS1Q07889 1333 aaPredicted RBP18.84■□□□□ 0.61
CPSF7-207ENST00000449811 NFIXQ14938 502 aa18.84■□□□□ 0.61
CPSF7-207ENST00000449811 AEBP1Q8IUX7 1158 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms