RNA–Protein interactions for RNA: ENST00000449505.5

PBRM1-216, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-216ENST00000449505 MORC1Q86VD1 984 aa9.42□□□□□ -0.9
PBRM1-216ENST00000449505 DCAF5Q96JK2 942 aa9.42□□□□□ -0.9
PBRM1-216ENST00000449505 PANK3Q9H999 370 aa9.42□□□□□ -0.9
PBRM1-216ENST00000449505 KNSTRNQ9Y448 316 aa9.42□□□□□ -0.9
PBRM1-216ENST00000449505 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.41□□□□□ -0.9
PBRM1-216ENST00000449505 ERVV-2B6SEH9 535 aa9.41□□□□□ -0.9
PBRM1-216ENST00000449505 PHF14O94880 888 aa9.41□□□□□ -0.9
PBRM1-216ENST00000449505 NLGN2Q8NFZ4 835 aa9.41□□□□□ -0.9
PBRM1-216ENST00000449505 KDRP35968 1356 aa9.4□□□□□ -0.9
PBRM1-216ENST00000449505 GNPATO15228 680 aa9.4□□□□□ -0.9
PBRM1-216ENST00000449505 GIGYF1O75420 1035 aaPredicted RBP9.4□□□□□ -0.9
PBRM1-216ENST00000449505 ATP6V1AP38606 617 aa9.4□□□□□ -0.9
PBRM1-216ENST00000449505 ZNF530Q6P9A1 599 aaPredicted RBP9.4□□□□□ -0.9
PBRM1-216ENST00000449505 COL5A3P25940 1745 aaPredicted RBP9.39□□□□□ -0.91
PBRM1-216ENST00000449505 CICQ96RK0 1608 aaPredicted RBP9.39□□□□□ -0.91
PBRM1-216ENST00000449505 RTCBQ9Y3I0 505 aaKnown RBP9.39□□□□□ -0.91
PBRM1-216ENST00000449505 CNTNAP4Q9C0A0 1308 aa9.38□□□□□ -0.91
PBRM1-216ENST00000449505 CABP4P57796 275 aa9.38□□□□□ -0.91
PBRM1-216ENST00000449505 LINC00116Q8NCU8 138 aa9.38□□□□□ -0.91
PBRM1-216ENST00000449505 ASAP1Q9ULH1 1129 aa9.38□□□□□ -0.91
PBRM1-216ENST00000449505 KDM6AO15550 1401 aaPredicted RBP9.38□□□□□ -0.91
PBRM1-216ENST00000449505 MTHFSP49914 203 aa9.37□□□□□ -0.91
PBRM1-216ENST00000449505 NLGN1Q8N2Q7 840 aa9.37□□□□□ -0.91
PBRM1-216ENST00000449505 RBM42Q9BTD8 480 aaKnown RBP9.37□□□□□ -0.91
PBRM1-216ENST00000449505 ATG3Q9NT62 314 aa9.37□□□□□ -0.91
PBRM1-216ENST00000449505 SENP3-EIF4A1A0A087X0R7 540 aa9.36□□□□□ -0.91
PBRM1-216ENST00000449505 YBX3P16989 372 aaKnown RBP eCLIP9.36□□□□□ -0.91
PBRM1-216ENST00000449505 C1QTNF8P60827 252 aa9.36□□□□□ -0.91
PBRM1-216ENST00000449505 ITPK1Q13572 414 aa9.36□□□□□ -0.91
PBRM1-216ENST00000449505 TRAPPC3LQ5T215 181 aa9.36□□□□□ -0.91
PBRM1-216ENST00000449505 RC3H1Q5TC82 1133 aaKnown RBP9.36□□□□□ -0.91
PBRM1-216ENST00000449505 SULT6B1Q6IMI4 303 aa9.36□□□□□ -0.91
PBRM1-216ENST00000449505 SCN11AQ9UI33 1791 aa9.36□□□□□ -0.91
PBRM1-216ENST00000449505 KIF13BQ9NQT8 1826 aa9.35□□□□□ -0.91
PBRM1-216ENST00000449505 MRC1P22897 1456 aa9.35□□□□□ -0.91
PBRM1-216ENST00000449505 MMP10P09238 476 aa9.35□□□□□ -0.91
PBRM1-216ENST00000449505 C4AP0C0L4 1744 aa9.35□□□□□ -0.91
PBRM1-216ENST00000449505 RFC4P35249 363 aa9.35□□□□□ -0.91
PBRM1-216ENST00000449505 C10orf71Q711Q0 1435 aa9.35□□□□□ -0.91
PBRM1-216ENST00000449505 ATP10DQ9P241 1426 aa9.35□□□□□ -0.91
PBRM1-216ENST00000449505 KIF7Q2M1P5 1343 aa9.34□□□□□ -0.91
PBRM1-216ENST00000449505 AKAP4Q5JQC9 854 aa9.34□□□□□ -0.91
PBRM1-216ENST00000449505 GPBP1L1Q9HC44 474 aaPredicted RBP9.34□□□□□ -0.91
PBRM1-216ENST00000449505 CCDC87Q9NVE4 849 aa9.34□□□□□ -0.91
PBRM1-216ENST00000449505 ADCY9O60503 1353 aa9.34□□□□□ -0.91
PBRM1-216ENST00000449505 NPC1L1Q9UHC9 1359 aa9.34□□□□□ -0.91
PBRM1-216ENST00000449505 TJP1Q07157 1748 aa9.34□□□□□ -0.92
PBRM1-216ENST00000449505 RPS6KA4O75676 772 aa9.33□□□□□ -0.92
PBRM1-216ENST00000449505 IL13P35225 146 aa9.33□□□□□ -0.92
PBRM1-216ENST00000449505 TGFB2P61812 414 aa9.33□□□□□ -0.92
PBRM1-216ENST00000449505 AMER1Q5JTC6 1135 aaPredicted RBP9.33□□□□□ -0.92
PBRM1-216ENST00000449505 AMIGO3Q86WK7 504 aa9.33□□□□□ -0.92
PBRM1-216ENST00000449505 AEBP1Q8IUX7 1158 aa9.33□□□□□ -0.92
PBRM1-216ENST00000449505 PARP3Q9Y6F1 533 aa9.33□□□□□ -0.92
PBRM1-216ENST00000449505 PXDNLA1KZ92 1463 aa9.33□□□□□ -0.92
PBRM1-216ENST00000449505 PTCD1O75127 700 aaKnown RBP9.32□□□□□ -0.92
PBRM1-216ENST00000449505 ADAMTS7Q9UKP4 1686 aa9.32□□□□□ -0.92
PBRM1-216ENST00000449505 DIAPH1O60610 1272 aaKnown RBP9.31□□□□□ -0.92
PBRM1-216ENST00000449505 CRKLP46109 303 aaKnown RBP9.31□□□□□ -0.92
PBRM1-216ENST00000449505 NFATC2IPQ8NCF5 419 aa9.31□□□□□ -0.92
PBRM1-216ENST00000449505 ARHGEF1Q92888 912 aaKnown RBP9.31□□□□□ -0.92
PBRM1-216ENST00000449505 SLC52A2Q9HAB3 445 aa9.31□□□□□ -0.92
PBRM1-216ENST00000449505 VIRMAQ69YN4 1812 aaKnown RBP9.31□□□□□ -0.92
PBRM1-216ENST00000449505 KIAA1551Q9HCM1 1747 aa9.31□□□□□ -0.92
PBRM1-216ENST00000449505 USP42Q9H9J4 1324 aaKnown RBP9.31□□□□□ -0.92
PBRM1-216ENST00000449505 GYS1P13807 737 aa9.3□□□□□ -0.92
PBRM1-216ENST00000449505 C1QBPQ07021 282 aaKnown RBP9.3□□□□□ -0.92
PBRM1-216ENST00000449505 SLC4A9Q96Q91 983 aa9.3□□□□□ -0.92
PBRM1-216ENST00000449505 MYH14Q7Z406 1995 aaKnown RBP9.3□□□□□ -0.92
PBRM1-216ENST00000449505 ARFGEF1Q9Y6D6 1849 aa9.29□□□□□ -0.92
PBRM1-216ENST00000449505 ZPR1O75312 459 aa9.29□□□□□ -0.92
PBRM1-216ENST00000449505 SMIM5Q71RC9 77 aa9.29□□□□□ -0.92
PBRM1-216ENST00000449505 TTC5Q8N0Z6 440 aa9.29□□□□□ -0.92
PBRM1-216ENST00000449505 VSIG10Q8N0Z9 540 aa9.29□□□□□ -0.92
PBRM1-216ENST00000449505 GAS2L2Q8NHY3 880 aa9.29□□□□□ -0.92
PBRM1-216ENST00000449505 CFAP53Q96M91 514 aa9.29□□□□□ -0.92
PBRM1-216ENST00000449505 BCS1LQ9Y276 419 aa9.29□□□□□ -0.92
PBRM1-216ENST00000449505 BRCA1P38398 1863 aaKnown RBP9.29□□□□□ -0.92
PBRM1-216ENST00000449505 N4BP2Q86UW6 1770 aaPredicted RBP9.29□□□□□ -0.92
PBRM1-216ENST00000449505 UBR2Q8IWV8 1755 aa9.29□□□□□ -0.92
PBRM1-216ENST00000449505 COL3A1P02461 1466 aaPredicted RBP9.28□□□□□ -0.92
PBRM1-216ENST00000449505 COL15A1P39059 1388 aa9.28□□□□□ -0.92
PBRM1-216ENST00000449505 KCPQ6ZWJ8 1503 aa9.28□□□□□ -0.92
PBRM1-216ENST00000449505 RNMTO43148 476 aaKnown RBP9.28□□□□□ -0.92
PBRM1-216ENST00000449505 HMOX1P09601 288 aa9.28□□□□□ -0.92
PBRM1-216ENST00000449505 CC2D1BQ5T0F9 858 aaKnown RBP9.28□□□□□ -0.92
PBRM1-216ENST00000449505 FCHSD2O94868 740 aa9.27□□□□□ -0.93
PBRM1-216ENST00000449505 TEFQ10587 303 aa9.27□□□□□ -0.93
PBRM1-216ENST00000449505 NPM2Q86SE8 214 aaKnown RBP9.27□□□□□ -0.93
PBRM1-216ENST00000449505 ZNF526Q8TF50 670 aaPredicted RBP9.27□□□□□ -0.93
PBRM1-216ENST00000449505 PIM2Q9P1W9 311 aa9.27□□□□□ -0.93
PBRM1-216ENST00000449505 WWC3Q9ULE0 1092 aa9.27□□□□□ -0.93
PBRM1-216ENST00000449505 CEP350Q5VT06 3117 aa9.27□□□□□ -0.93
PBRM1-216ENST00000449505 SOS1Q07889 1333 aaPredicted RBP9.27□□□□□ -0.93
PBRM1-216ENST00000449505 A0A087WZG4 1122 aa9.26□□□□□ -0.93
PBRM1-216ENST00000449505 U2SURPO15042 1029 aaKnown RBP9.26□□□□□ -0.93
PBRM1-216ENST00000449505 PER1O15534 1290 aaPredicted RBP9.26□□□□□ -0.93
PBRM1-216ENST00000449505 STARD3NLO95772 234 aa9.26□□□□□ -0.93
PBRM1-216ENST00000449505 MTHFSDQ2M296 383 aaKnown RBP9.26□□□□□ -0.93
PBRM1-216ENST00000449505 DALRD3Q5D0E6 543 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms