RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 SPATA31A1Q5TZJ5 1347 aa10.15□□□□□ -0.78
LINC00954-202ENST00000449086 RBM10P98175 930 aaKnown RBP10.15□□□□□ -0.78
LINC00954-202ENST00000449086 CACNB1Q02641 598 aaPredicted RBP10.15□□□□□ -0.78
LINC00954-202ENST00000449086 PARP4Q9UKK3 1724 aaKnown RBP10.15□□□□□ -0.78
LINC00954-202ENST00000449086 GLI3P10071 1580 aa10.15□□□□□ -0.78
LINC00954-202ENST00000449086 KDRP35968 1356 aa10.15□□□□□ -0.78
LINC00954-202ENST00000449086 THSD7AQ9UPZ6 1657 aa10.15□□□□□ -0.78
LINC00954-202ENST00000449086 PDE3AQ14432 1141 aa10.15□□□□□ -0.78
LINC00954-202ENST00000449086 DISP2A7MBM2 1401 aa10.15□□□□□ -0.79
LINC00954-202ENST00000449086 CSB-PGBD3P0DP91 1061 aa10.14□□□□□ -0.79
LINC00954-202ENST00000449086 LARP1Q6PKG0 1096 aaKnown RBP10.14□□□□□ -0.79
LINC00954-202ENST00000449086 KIAA1211Q6ZU35 1233 aa10.14□□□□□ -0.79
LINC00954-202ENST00000449086 TOM1L2Q6ZVM7 507 aa10.14□□□□□ -0.79
LINC00954-202ENST00000449086 ONECUT3O60422 494 aaPredicted RBP10.14□□□□□ -0.79
LINC00954-202ENST00000449086 TRMT2AQ8IZ69 625 aaKnown RBP10.14□□□□□ -0.79
LINC00954-202ENST00000449086 TCP11L2Q8N4U5 519 aa10.14□□□□□ -0.79
LINC00954-202ENST00000449086 GJD4Q96KN9 370 aaPredicted RBP10.14□□□□□ -0.79
LINC00954-202ENST00000449086 STRN4Q9NRL3 753 aa10.14□□□□□ -0.79
LINC00954-202ENST00000449086 DDX11L8A8MPP1 907 aa10.13□□□□□ -0.79
LINC00954-202ENST00000449086 RBM6P78332 1123 aaKnown RBP10.13□□□□□ -0.79
LINC00954-202ENST00000449086 QTRT2Q9H974 415 aaKnown RBP10.13□□□□□ -0.79
LINC00954-202ENST00000449086 RGPD2P0DJD1 1756 aa10.13□□□□□ -0.79
LINC00954-202ENST00000449086 RLBP1P12271 317 aa10.13□□□□□ -0.79
LINC00954-202ENST00000449086 RGS17Q9UGC6 210 aaPredicted RBP10.13□□□□□ -0.79
LINC00954-202ENST00000449086 ANP32BQ92688 251 aaKnown RBP10.12□□□□□ -0.79
LINC00954-202ENST00000449086 EYA1Q99502 592 aa10.12□□□□□ -0.79
LINC00954-202ENST00000449086 RWDD1Q9H446 243 aaPredicted RBP10.12□□□□□ -0.79
LINC00954-202ENST00000449086 NLRP2Q9NX02 1062 aa10.12□□□□□ -0.79
LINC00954-202ENST00000449086 PKD1L3Q7Z443 1732 aa10.12□□□□□ -0.79
LINC00954-202ENST00000449086 HSP90AB1P08238 724 aaKnown RBP10.12□□□□□ -0.79
LINC00954-202ENST00000449086 FAM13BQ9NYF5 915 aa10.12□□□□□ -0.79
LINC00954-202ENST00000449086 NBPF6Q5VWK0 638 aa10.11□□□□□ -0.79
LINC00954-202ENST00000449086 GAS2L3Q86XJ1 694 aa10.11□□□□□ -0.79
LINC00954-202ENST00000449086 FTSJ3Q8IY81 847 aaKnown RBP10.11□□□□□ -0.79
LINC00954-202ENST00000449086 NBPF4Q96M43 638 aa10.11□□□□□ -0.79
LINC00954-202ENST00000449086 OVOS2A0A0G2JMS6 1433 aa10.11□□□□□ -0.79
LINC00954-202ENST00000449086 LRRC37A3O60309 1634 aa10.11□□□□□ -0.79
LINC00954-202ENST00000449086 MSNP26038 577 aaKnown RBP10.11□□□□□ -0.79
LINC00954-202ENST00000449086 LTV1Q96GA3 475 aaPredicted RBP10.11□□□□□ -0.79
LINC00954-202ENST00000449086 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.11□□□□□ -0.79
LINC00954-202ENST00000449086 FCHSD2O94868 740 aa10.1□□□□□ -0.79
LINC00954-202ENST00000449086 IL2RBP14784 551 aa10.1□□□□□ -0.79
LINC00954-202ENST00000449086 RXRBP28702 533 aa10.1□□□□□ -0.79
LINC00954-202ENST00000449086 PPP4R3CPQ6ZMV5 832 aa10.1□□□□□ -0.79
LINC00954-202ENST00000449086 NCLP19338 710 aaKnown RBP10.1□□□□□ -0.79
LINC00954-202ENST00000449086 WWC1Q8IX03 1113 aa10.1□□□□□ -0.79
LINC00954-202ENST00000449086 PDCL3Q9H2J4 239 aa10.1□□□□□ -0.79
LINC00954-202ENST00000449086 PODXL2Q9NZ53 605 aa10.1□□□□□ -0.79
LINC00954-202ENST00000449086 TNS2Q63HR2 1409 aa10.1□□□□□ -0.79
LINC00954-202ENST00000449086 TPM2P07951 284 aa10.09□□□□□ -0.79
LINC00954-202ENST00000449086 TNPO1Q92973 898 aaKnown RBP10.09□□□□□ -0.79
LINC00954-202ENST00000449086 CCDC9Q9Y3X0 531 aaKnown RBP10.09□□□□□ -0.79
LINC00954-202ENST00000449086 GBP4Q96PP9 640 aa10.09□□□□□ -0.79
LINC00954-202ENST00000449086 MEGF6O75095 1541 aa10.09□□□□□ -0.79
LINC00954-202ENST00000449086 TATP17735 454 aaPredicted RBP10.08□□□□□ -0.8
LINC00954-202ENST00000449086 RAPGEF4Q8WZA2 1011 aa10.08□□□□□ -0.8
LINC00954-202ENST00000449086 RARSP54136 660 aaKnown RBP10.08□□□□□ -0.8
LINC00954-202ENST00000449086 AMOTQ4VCS5 1084 aa10.08□□□□□ -0.8
LINC00954-202ENST00000449086 POTEAQ6S8J7 498 aa10.08□□□□□ -0.8
LINC00954-202ENST00000449086 BCL9O00512 1426 aa10.08□□□□□ -0.8
LINC00954-202ENST00000449086 NASPP49321 788 aaPredicted RBP10.08□□□□□ -0.8
LINC00954-202ENST00000449086 R3HCC1Q9Y3T6 440 aaKnown RBP10.08□□□□□ -0.8
LINC00954-202ENST00000449086 SHANK3Q9BYB0 1731 aa10.07□□□□□ -0.8
LINC00954-202ENST00000449086 A0A0U1RQG5 324 aaPredicted RBP10.07□□□□□ -0.8
LINC00954-202ENST00000449086 U2SURPO15042 1029 aaKnown RBP10.07□□□□□ -0.8
LINC00954-202ENST00000449086 U2AF1L5P0DN76 240 aaPredicted RBP10.07□□□□□ -0.8
LINC00954-202ENST00000449086 U2AF1Q01081 240 aaKnown RBP eCLIP10.07□□□□□ -0.8
LINC00954-202ENST00000449086 SULT6B1Q6IMI4 303 aa10.07□□□□□ -0.8
LINC00954-202ENST00000449086 RGS12O14924 1447 aa10.07□□□□□ -0.8
LINC00954-202ENST00000449086 VIRMAQ69YN4 1812 aaKnown RBP10.06□□□□□ -0.8
LINC00954-202ENST00000449086 FAM98CQ17RN3 349 aaKnown RBP10.06□□□□□ -0.8
LINC00954-202ENST00000449086 NCBP3Q53F19 620 aaKnown RBP10.06□□□□□ -0.8
LINC00954-202ENST00000449086 ITPRIPQ8IWB1 547 aa10.06□□□□□ -0.8
LINC00954-202ENST00000449086 SPG7Q9UQ90 795 aa10.06□□□□□ -0.8
LINC00954-202ENST00000449086 DDX49Q9Y6V7 483 aaKnown RBP10.06□□□□□ -0.8
LINC00954-202ENST00000449086 PLEKHO1Q53GL0 409 aaPredicted RBP10.05□□□□□ -0.8
LINC00954-202ENST00000449086 PCDH11XQ9BZA7 1347 aa10.05□□□□□ -0.8
LINC00954-202ENST00000449086 PCDH11YQ9BZA8 1340 aa10.05□□□□□ -0.8
LINC00954-202ENST00000449086 DDB1Q16531 1140 aa10.05□□□□□ -0.8
LINC00954-202ENST00000449086 SEPT12Q8IYM1 358 aa10.05□□□□□ -0.8
LINC00954-202ENST00000449086 USHBP1Q8N6Y0 703 aa10.05□□□□□ -0.8
LINC00954-202ENST00000449086 PLEKHF1Q96S99 279 aa10.05□□□□□ -0.8
LINC00954-202ENST00000449086 GOLGA6L22H0YM25 854 aa10.05□□□□□ -0.8
LINC00954-202ENST00000449086 EXOC5O00471 708 aa10.05□□□□□ -0.8
LINC00954-202ENST00000449086 AEBP1Q8IUX7 1158 aa10.05□□□□□ -0.8
LINC00954-202ENST00000449086 ZCRB1Q8TBF4 217 aaKnown RBP10.05□□□□□ -0.8
LINC00954-202ENST00000449086 ADAMTS7Q9UKP4 1686 aa10.04□□□□□ -0.8
LINC00954-202ENST00000449086 ZSCAN30Q86W11 494 aa10.04□□□□□ -0.8
LINC00954-202ENST00000449086 LNPKQ9C0E8 428 aa10.04□□□□□ -0.8
LINC00954-202ENST00000449086 ISY1Q9ULR0 285 aaKnown RBP10.04□□□□□ -0.8
LINC00954-202ENST00000449086 PRKAR2BP31323 418 aa10.04□□□□□ -0.8
LINC00954-202ENST00000449086 GAS2L2Q8NHY3 880 aa10.04□□□□□ -0.8
LINC00954-202ENST00000449086 RUNDC1Q96C34 613 aa10.04□□□□□ -0.8
LINC00954-202ENST00000449086 BRWD3Q6RI45 1802 aa10.03□□□□□ -0.8
LINC00954-202ENST00000449086 HMOX1P09601 288 aa10.03□□□□□ -0.8
LINC00954-202ENST00000449086 CCDC173Q0VFZ6 552 aa10.03□□□□□ -0.8
LINC00954-202ENST00000449086 NGEFQ8N5V2 710 aa10.03□□□□□ -0.8
LINC00954-202ENST00000449086 MVPQ14764 893 aaKnown RBP10.03□□□□□ -0.8
LINC00954-202ENST00000449086 NKX1-1Q15270 411 aaPredicted RBP10.03□□□□□ -0.8
LINC00954-202ENST00000449086 DZIP1LQ8IYY4 767 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms