RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-208	ENST00000447995	SYNJ2	O15056	1496 aa		5.77	□□□□□ -1.49
PTPN12-208	ENST00000447995	ADH1A	P07327	375 aa		5.77	□□□□□ -1.49
PTPN12-208	ENST00000447995	SLURP2	P0DP57	97 aa		5.77	□□□□□ -1.49
PTPN12-208	ENST00000447995	PRKCSH	P14314	528 aa	Predicted RBP	5.77	□□□□□ -1.49
PTPN12-208	ENST00000447995	RASSF7	Q02833	373 aa		5.77	□□□□□ -1.49
PTPN12-208	ENST00000447995	SUZ12	Q15022	739 aa	Known RBP	5.77	□□□□□ -1.49
PTPN12-208	ENST00000447995	SVOP	Q8N4V2	548 aa		5.77	□□□□□ -1.49
PTPN12-208	ENST00000447995	WHAMM	Q8TF30	809 aa		5.77	□□□□□ -1.49
PTPN12-208	ENST00000447995	POLM	Q9NP87	494 aa	Predicted RBP	5.77	□□□□□ -1.49
PTPN12-208	ENST00000447995	TMPRSS4	Q9NRS4	437 aa		5.77	□□□□□ -1.49
PTPN12-208	ENST00000447995	GPSM3	Q9Y4H4	160 aa		5.77	□□□□□ -1.49
PTPN12-208	ENST00000447995	LRRIQ1	Q96JM4	1722 aa		5.77	□□□□□ -1.49
PTPN12-208	ENST00000447995	CARMIL2	Q6F5E8	1435 aa		5.76	□□□□□ -1.49
PTPN12-208	ENST00000447995	CDC14C	A4D256	554 aa		5.76	□□□□□ -1.49
PTPN12-208	ENST00000447995	ARHGEF15	O94989	841 aa		5.76	□□□□□ -1.49
PTPN12-208	ENST00000447995	PTK2	Q05397	1052 aa		5.76	□□□□□ -1.49
PTPN12-208	ENST00000447995	NEUROD1	Q13562	356 aa		5.76	□□□□□ -1.49
PTPN12-208	ENST00000447995	SKIV2L	Q15477	1246 aa	Known RBP	5.76	□□□□□ -1.49
PTPN12-208	ENST00000447995	NBPF20	Q3BBV1	942 aa		5.76	□□□□□ -1.49
PTPN12-208	ENST00000447995	VWA5B2	Q8N398	1253 aa		5.76	□□□□□ -1.49
PTPN12-208	ENST00000447995	TMEM151A	Q8N4L1	468 aa		5.76	□□□□□ -1.49
PTPN12-208	ENST00000447995	ZNF784	Q8NCA9	323 aa	Predicted RBP	5.76	□□□□□ -1.49
PTPN12-208	ENST00000447995	PROCA1	Q8NCQ7	364 aa	Predicted RBP	5.76	□□□□□ -1.49
PTPN12-208	ENST00000447995	HMX1	Q9NP08	348 aa	Predicted RBP	5.76	□□□□□ -1.49
PTPN12-208	ENST00000447995	NAIP	Q13075	1403 aa		5.75	□□□□□ -1.49
PTPN12-208	ENST00000447995	MAGI3	Q5TCQ9	1506 aa		5.75	□□□□□ -1.49
PTPN12-208	ENST00000447995	DISP1	Q96F81	1524 aa		5.75	□□□□□ -1.49
PTPN12-208	ENST00000447995	RAPGEF6	Q8TEU7	1601 aa		5.75	□□□□□ -1.49
PTPN12-208	ENST00000447995	LILRA1	O75019	489 aa		5.75	□□□□□ -1.49
PTPN12-208	ENST00000447995	GDF11	O95390	407 aa		5.75	□□□□□ -1.49
PTPN12-208	ENST00000447995	SV2A	Q7L0J3	742 aa		5.75	□□□□□ -1.49
PTPN12-208	ENST00000447995	KDF1	Q8NAX2	398 aa	Predicted RBP	5.75	□□□□□ -1.49
PTPN12-208	ENST00000447995	EPS8L1	Q8TE68	723 aa		5.75	□□□□□ -1.49
PTPN12-208	ENST00000447995	CHMP7	Q8WUX9	453 aa	Predicted RBP	5.75	□□□□□ -1.49
PTPN12-208	ENST00000447995	ZNF395	Q9H8N7	513 aa	Predicted RBP	5.75	□□□□□ -1.49
PTPN12-208	ENST00000447995	TONSL	Q96HA7	1378 aa		5.75	□□□□□ -1.49
PTPN12-208	ENST00000447995	ESPN	B1AK53	854 aa		5.74	□□□□□ -1.49
PTPN12-208	ENST00000447995	USP17L8	P0C7I0	530 aa		5.74	□□□□□ -1.49
PTPN12-208	ENST00000447995	GPBP1L1	Q9HC44	474 aa	Predicted RBP	5.74	□□□□□ -1.49
PTPN12-208	ENST00000447995	ROCK1	Q13464	1354 aa		5.74	□□□□□ -1.49
PTPN12-208	ENST00000447995	GCC2	Q8IWJ2	1684 aa		5.74	□□□□□ -1.49
PTPN12-208	ENST00000447995	CDK13	Q14004	1512 aa	Known RBP	5.74	□□□□□ -1.49
PTPN12-208	ENST00000447995	NUP160	Q12769	1436 aa		5.74	□□□□□ -1.49
PTPN12-208	ENST00000447995	PTPRK	Q15262	1439 aa		5.74	□□□□□ -1.49
PTPN12-208	ENST00000447995	NUP153	P49790	1475 aa	Known RBP	5.73	□□□□□ -1.49
PTPN12-208	ENST00000447995	ERVH48-1	M5A8F1	160 aa		5.73	□□□□□ -1.49
PTPN12-208	ENST00000447995	PPP1R15A	O75807	674 aa	Predicted RBP	5.73	□□□□□ -1.49
PTPN12-208	ENST00000447995	AP1G2	O75843	785 aa		5.73	□□□□□ -1.49
PTPN12-208	ENST00000447995	ADD1	P35611	737 aa	Known RBP	5.73	□□□□□ -1.49
PTPN12-208	ENST00000447995	RAB15	P59190	212 aa		5.73	□□□□□ -1.49
PTPN12-208	ENST00000447995	GAS6	Q14393	721 aa		5.73	□□□□□ -1.49
PTPN12-208	ENST00000447995	TPRN	Q4KMQ1	711 aa		5.73	□□□□□ -1.49
PTPN12-208	ENST00000447995	CUEDC1	Q9NWM3	386 aa	Predicted RBP	5.73	□□□□□ -1.49
PTPN12-208	ENST00000447995	TRO	Q12816	1431 aa	Predicted RBP	5.73	□□□□□ -1.49
PTPN12-208	ENST00000447995	ADAMTS2	O95450	1211 aa		5.72	□□□□□ -1.49
PTPN12-208	ENST00000447995	PTGIR	P43119	386 aa		5.72	□□□□□ -1.49
PTPN12-208	ENST00000447995	SIN3A	Q96ST3	1273 aa		5.72	□□□□□ -1.49
PTPN12-208	ENST00000447995	FAM117A	Q9C073	453 aa		5.72	□□□□□ -1.49
PTPN12-208	ENST00000447995	KDM4C	Q9H3R0	1056 aa		5.72	□□□□□ -1.49
PTPN12-208	ENST00000447995	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	5.72	□□□□□ -1.49
PTPN12-208	ENST00000447995	CEP170	Q5SW79	1584 aa		5.72	□□□□□ -1.49
PTPN12-208	ENST00000447995	DZIP3	Q86Y13	1208 aa	Known RBP	5.71	□□□□□ -1.5
PTPN12-208	ENST00000447995	DDRGK1	Q96HY6	314 aa		5.71	□□□□□ -1.5
PTPN12-208	ENST00000447995	YTHDC1	Q96MU7	727 aa	Known RBP	5.71	□□□□□ -1.5
PTPN12-208	ENST00000447995	GTF3C3	Q9Y5Q9	886 aa		5.71	□□□□□ -1.5
PTPN12-208	ENST00000447995	ITSN2	Q9NZM3	1697 aa		5.71	□□□□□ -1.5
PTPN12-208	ENST00000447995	DAPK1	P53355	1430 aa		5.71	□□□□□ -1.5
PTPN12-208	ENST00000447995	DNMT1	P26358	1616 aa	Known RBP	5.7	□□□□□ -1.5
PTPN12-208	ENST00000447995	ADCY10	Q96PN6	1610 aa		5.7	□□□□□ -1.5
PTPN12-208	ENST00000447995	IRS1	P35568	1242 aa		5.7	□□□□□ -1.5
PTPN12-208	ENST00000447995	LYPD4	Q6UWN0	246 aa		5.7	□□□□□ -1.5
PTPN12-208	ENST00000447995	LYSMD3	Q7Z3D4	306 aa		5.7	□□□□□ -1.5
PTPN12-208	ENST00000447995	PNMA1	Q8ND90	353 aa		5.7	□□□□□ -1.5
PTPN12-208	ENST00000447995	TRIM34	Q9BYJ4	488 aa		5.7	□□□□□ -1.5
PTPN12-208	ENST00000447995	CYLD	Q9NQC7	956 aa		5.7	□□□□□ -1.5
PTPN12-208	ENST00000447995	SRSF11	Q05519	484 aa	Known RBP	5.69	□□□□□ -1.5
PTPN12-208	ENST00000447995	KANK3	Q6NY19	840 aa		5.69	□□□□□ -1.5
PTPN12-208	ENST00000447995	SEPT12	Q8IYM1	358 aa		5.69	□□□□□ -1.5
PTPN12-208	ENST00000447995	TRIM52	Q96A61	297 aa		5.69	□□□□□ -1.5
PTPN12-208	ENST00000447995	ZNF837	Q96EG3	531 aa	Predicted RBP	5.69	□□□□□ -1.5
PTPN12-208	ENST00000447995	RRP7BP	Q9NSQ0	103 aa		5.69	□□□□□ -1.5
PTPN12-208	ENST00000447995	CHIC2	Q9UKJ5	165 aa		5.69	□□□□□ -1.5
PTPN12-208	ENST00000447995	ABCC5	O15440	1437 aa		5.68	□□□□□ -1.5
PTPN12-208	ENST00000447995	PLEKHD1	A6NEE1	506 aa		5.68	□□□□□ -1.5
PTPN12-208	ENST00000447995	CELA2B	P08218	269 aa	Predicted RBP	5.68	□□□□□ -1.5
PTPN12-208	ENST00000447995	RHOQ	P17081	205 aa		5.68	□□□□□ -1.5
PTPN12-208	ENST00000447995	RFC5	P40937	340 aa		5.68	□□□□□ -1.5
PTPN12-208	ENST00000447995	CFDP1	Q9UEE9	299 aa	Predicted RBP	5.68	□□□□□ -1.5
PTPN12-208	ENST00000447995	ADGRL2	O95490	1459 aa		5.68	□□□□□ -1.5
PTPN12-208	ENST00000447995	CAMSAP2	Q08AD1	1489 aa		5.68	□□□□□ -1.5
PTPN12-208	ENST00000447995	PLB1	Q6P1J6	1458 aa		5.68	□□□□□ -1.5
PTPN12-208	ENST00000447995	ABCA8	O94911	1581 aa		5.67	□□□□□ -1.5
PTPN12-208	ENST00000447995	KIF14	Q15058	1648 aa		5.67	□□□□□ -1.5
PTPN12-208	ENST00000447995	ARID3C	A6NKF2	412 aa		5.67	□□□□□ -1.5
PTPN12-208	ENST00000447995	RNF144A	P50876	292 aa	Predicted RBP	5.67	□□□□□ -1.5
PTPN12-208	ENST00000447995	MARS	P56192	900 aa	Known RBP	5.67	□□□□□ -1.5
PTPN12-208	ENST00000447995	GPAT2	Q6NUI2	795 aa		5.67	□□□□□ -1.5
PTPN12-208	ENST00000447995	SCARF2	Q96GP6	870 aa	Predicted RBP	5.67	□□□□□ -1.5
PTPN12-208	ENST00000447995	MPHOSPH9	Q99550	1183 aa		5.67	□□□□□ -1.5
PTPN12-208	ENST00000447995	GPATCH8	Q9UKJ3	1502 aa	Known RBP	5.67	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms