RNA–Protein interactions for RNA: ENST00000447608.1

COL11A1-205, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-205ENST00000447608 POTEMA6NI47 508 aa9.88□□□□□ -0.83
COL11A1-205ENST00000447608 BACH2Q9BYV9 841 aa9.88□□□□□ -0.83
COL11A1-205ENST00000447608 BCL11AQ9H165 835 aa9.88□□□□□ -0.83
COL11A1-205ENST00000447608 PPEF1O14829 653 aaPredicted RBP9.87□□□□□ -0.83
COL11A1-205ENST00000447608 EPHA4P54764 986 aa9.87□□□□□ -0.83
COL11A1-205ENST00000447608 PTPN5P54829 565 aa9.87□□□□□ -0.83
COL11A1-205ENST00000447608 ZC3H6P61129 1189 aaKnown RBP9.87□□□□□ -0.83
COL11A1-205ENST00000447608 CYLDQ9NQC7 956 aa9.87□□□□□ -0.83
COL11A1-205ENST00000447608 TMPRSS4Q9NRS4 437 aa9.87□□□□□ -0.83
COL11A1-205ENST00000447608 BRPF3Q9ULD4 1205 aa9.87□□□□□ -0.83
COL11A1-205ENST00000447608 MAP4K5Q9Y4K4 846 aa9.87□□□□□ -0.83
COL11A1-205ENST00000447608 A0A1W2PRU2 124 aa9.86□□□□□ -0.83
COL11A1-205ENST00000447608 NDUFB5O43674 189 aa9.86□□□□□ -0.83
COL11A1-205ENST00000447608 INHAP05111 366 aa9.86□□□□□ -0.83
COL11A1-205ENST00000447608 VARSP26640 1264 aaKnown RBP9.86□□□□□ -0.83
COL11A1-205ENST00000447608 C16orf46Q6P387 395 aa9.86□□□□□ -0.83
COL11A1-205ENST00000447608 TMC1Q8TDI8 760 aa9.86□□□□□ -0.83
COL11A1-205ENST00000447608 SREK1Q8WXA9 508 aaKnown RBP9.86□□□□□ -0.83
COL11A1-205ENST00000447608 DRC1Q96MC2 740 aa9.86□□□□□ -0.83
COL11A1-205ENST00000447608 ETNK1Q9HBU6 452 aa9.86□□□□□ -0.83
COL11A1-205ENST00000447608 WASLO00401 505 aaPredicted RBP9.85□□□□□ -0.83
COL11A1-205ENST00000447608 ZBTB24O43167 697 aaPredicted RBP9.85□□□□□ -0.83
COL11A1-205ENST00000447608 TREHO43280 583 aa9.85□□□□□ -0.83
COL11A1-205ENST00000447608 MRPL58Q14197 206 aaKnown RBP9.85□□□□□ -0.83
COL11A1-205ENST00000447608 ARID5BQ14865 1188 aa9.85□□□□□ -0.83
COL11A1-205ENST00000447608 TBCELQ5QJ74 424 aa9.85□□□□□ -0.83
COL11A1-205ENST00000447608 CCDC87Q9NVE4 849 aa9.85□□□□□ -0.83
COL11A1-205ENST00000447608 PPP1R12BO60237 982 aaPredicted RBP9.84□□□□□ -0.83
COL11A1-205ENST00000447608 EIF1AXP47813 144 aaKnown RBP9.84□□□□□ -0.83
COL11A1-205ENST00000447608 SKOR1P84550 965 aa9.84□□□□□ -0.83
COL11A1-205ENST00000447608 FMR1Q06787 632 aaKnown RBP eCLIP9.84□□□□□ -0.83
COL11A1-205ENST00000447608 TRIM32Q13049 653 aa9.84□□□□□ -0.83
COL11A1-205ENST00000447608 AAMPQ13685 434 aa9.84□□□□□ -0.83
COL11A1-205ENST00000447608 LCE2DQ5TA82 110 aaPredicted RBP9.84□□□□□ -0.83
COL11A1-205ENST00000447608 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.84□□□□□ -0.83
COL11A1-205ENST00000447608 NAALADL2Q58DX5 795 aa9.83□□□□□ -0.84
COL11A1-205ENST00000447608 SLC4A9Q96Q91 983 aa9.83□□□□□ -0.84
COL11A1-205ENST00000447608 FZD6O60353 706 aa9.82□□□□□ -0.84
COL11A1-205ENST00000447608 PLCB3Q01970 1234 aa9.82□□□□□ -0.84
COL11A1-205ENST00000447608 COX20Q5RI15 118 aa9.82□□□□□ -0.84
COL11A1-205ENST00000447608 C9orf131Q5VYM1 1079 aa9.82□□□□□ -0.84
COL11A1-205ENST00000447608 CITED4Q96RK1 184 aa9.82□□□□□ -0.84
COL11A1-205ENST00000447608 TNFRSF10BO14763 440 aa9.81□□□□□ -0.84
COL11A1-205ENST00000447608 LDHBP07195 334 aaKnown RBP9.81□□□□□ -0.84
COL11A1-205ENST00000447608 ERCC5P28715 1186 aaPredicted RBP9.81□□□□□ -0.84
COL11A1-205ENST00000447608 MAPK8P45983 427 aa9.81□□□□□ -0.84
COL11A1-205ENST00000447608 HDLBPQ00341 1268 aaKnown RBP9.81□□□□□ -0.84
COL11A1-205ENST00000447608 FOXK2Q01167 660 aa9.81□□□□□ -0.84
COL11A1-205ENST00000447608 DSC3Q14574 896 aa9.81□□□□□ -0.84
COL11A1-205ENST00000447608 LDLRAD1Q5T700 205 aa9.81□□□□□ -0.84
COL11A1-205ENST00000447608 ZNF784Q8NCA9 323 aaPredicted RBP9.81□□□□□ -0.84
COL11A1-205ENST00000447608 FAM161BQ96MY7 647 aa9.81□□□□□ -0.84
COL11A1-205ENST00000447608 C2orf49Q9BVC5 232 aaPredicted RBP9.81□□□□□ -0.84
COL11A1-205ENST00000447608 STIM2Q9P246 746 aa9.81□□□□□ -0.84
COL11A1-205ENST00000447608 SCAMP3O14828 347 aaKnown RBP9.8□□□□□ -0.84
COL11A1-205ENST00000447608 FSHRP23945 695 aa9.8□□□□□ -0.84
COL11A1-205ENST00000447608 WNT7BP56706 349 aa9.8□□□□□ -0.84
COL11A1-205ENST00000447608 PLA2G2CQ5R387 149 aa9.8□□□□□ -0.84
COL11A1-205ENST00000447608 ALKBH2Q6NS38 261 aa9.8□□□□□ -0.84
COL11A1-205ENST00000447608 SLC9A9Q8IVB4 645 aa9.8□□□□□ -0.84
COL11A1-205ENST00000447608 PRKD2Q9BZL6 878 aa9.8□□□□□ -0.84
COL11A1-205ENST00000447608 SCHIP1Q9P0W5 487 aaPredicted RBP9.8□□□□□ -0.84
COL11A1-205ENST00000447608 A6NJY4 79 aa9.79□□□□□ -0.84
COL11A1-205ENST00000447608 GRM5P41594 1212 aa9.79□□□□□ -0.84
COL11A1-205ENST00000447608 XPCQ01831 940 aaPredicted RBP9.79□□□□□ -0.84
COL11A1-205ENST00000447608 DHX9Q08211 1270 aaKnown RBP9.79□□□□□ -0.84
COL11A1-205ENST00000447608 EHHADHQ08426 723 aa9.79□□□□□ -0.84
COL11A1-205ENST00000447608 STAG2Q8N3U4 1231 aa9.79□□□□□ -0.84
COL11A1-205ENST00000447608 EHBP1Q8NDI1 1231 aa9.79□□□□□ -0.84
COL11A1-205ENST00000447608 CDK15Q96Q40 435 aa9.79□□□□□ -0.84
COL11A1-205ENST00000447608 KRTAP3-3Q9BYR6 98 aa9.79□□□□□ -0.84
COL11A1-205ENST00000447608 KRTAP3-2Q9BYR7 98 aa9.79□□□□□ -0.84
COL11A1-205ENST00000447608 RNF19AQ9NV58 838 aa9.79□□□□□ -0.84
COL11A1-205ENST00000447608 PPP1R1BQ9UD71 204 aaPredicted RBP9.79□□□□□ -0.84
COL11A1-205ENST00000447608 PARP2Q9UGN5 583 aa9.79□□□□□ -0.84
COL11A1-205ENST00000447608 ZBTB39O15060 712 aa9.78□□□□□ -0.84
COL11A1-205ENST00000447608 LILRA1O75019 489 aa9.78□□□□□ -0.84
COL11A1-205ENST00000447608 GNRH1P01148 92 aa9.78□□□□□ -0.84
COL11A1-205ENST00000447608 IGHA2P01877 340 aa9.78□□□□□ -0.84
COL11A1-205ENST00000447608 SMTNP53814 917 aa9.78□□□□□ -0.84
COL11A1-205ENST00000447608 DMRTB1Q96MA1 342 aa9.78□□□□□ -0.84
COL11A1-205ENST00000447608 DUSP9Q99956 384 aaKnown RBP9.78□□□□□ -0.84
COL11A1-205ENST00000447608 QTRT2Q9H974 415 aaKnown RBP9.78□□□□□ -0.84
COL11A1-205ENST00000447608 RAB6BQ9NRW1 208 aa9.78□□□□□ -0.84
COL11A1-205ENST00000447608 WWC3Q9ULE0 1092 aa9.78□□□□□ -0.84
COL11A1-205ENST00000447608 LRFN2Q9ULH4 789 aa9.78□□□□□ -0.84
COL11A1-205ENST00000447608 RNF223E7ERA6 249 aa9.77□□□□□ -0.85
COL11A1-205ENST00000447608 GPR182O15218 404 aa9.77□□□□□ -0.85
COL11A1-205ENST00000447608 PRPF40AO75400 957 aaKnown RBP9.77□□□□□ -0.85
COL11A1-205ENST00000447608 ADD1P35611 737 aaKnown RBP9.77□□□□□ -0.85
COL11A1-205ENST00000447608 MYT1Q01538 1121 aa9.77□□□□□ -0.85
COL11A1-205ENST00000447608 MTFR1Q15390 333 aa9.77□□□□□ -0.85
COL11A1-205ENST00000447608 FAM26DQ5JW98 314 aa9.77□□□□□ -0.85
COL11A1-205ENST00000447608 CYP2U1Q7Z449 544 aa9.77□□□□□ -0.85
COL11A1-205ENST00000447608 FAM177A1Q8N128 213 aaPredicted RBP9.77□□□□□ -0.85
COL11A1-205ENST00000447608 TRIM52Q96A61 297 aa9.77□□□□□ -0.85
COL11A1-205ENST00000447608 FAM129BQ96TA1 746 aa9.77□□□□□ -0.85
COL11A1-205ENST00000447608 ESCO1Q5FWF5 840 aa9.76□□□□□ -0.85
COL11A1-205ENST00000447608 ATCAYQ86WG3 371 aa9.76□□□□□ -0.85
COL11A1-205ENST00000447608 TMEM87AQ8NBN3 555 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms