RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 WEE1P30291 646 aa7.73□□□□□ -1.17
HMGB1P16-201ENST00000447155 TMCO4Q5TGY1 634 aa7.73□□□□□ -1.17
HMGB1P16-201ENST00000447155 TRIM67Q6ZTA4 783 aa7.73□□□□□ -1.17
HMGB1P16-201ENST00000447155 XAGE2Q96GT9 111 aa7.73□□□□□ -1.17
HMGB1P16-201ENST00000447155 ARHGEF10LQ9HCE6 1279 aa7.73□□□□□ -1.17
HMGB1P16-201ENST00000447155 SERTAD1Q9UHV2 236 aa7.73□□□□□ -1.17
HMGB1P16-201ENST00000447155 MTMR7Q9Y216 660 aa7.73□□□□□ -1.17
HMGB1P16-201ENST00000447155 TIMP2P16035 220 aa7.72□□□□□ -1.17
HMGB1P16-201ENST00000447155 CBLBQ13191 982 aa7.72□□□□□ -1.17
HMGB1P16-201ENST00000447155 TAS1R3Q7RTX0 852 aa7.72□□□□□ -1.17
HMGB1P16-201ENST00000447155 TNS4Q8IZW8 715 aa7.72□□□□□ -1.17
HMGB1P16-201ENST00000447155 ZFAND3Q9H8U3 227 aa7.72□□□□□ -1.17
HMGB1P16-201ENST00000447155 RAB6BQ9NRW1 208 aa7.72□□□□□ -1.17
HMGB1P16-201ENST00000447155 LGR5O75473 907 aa7.71□□□□□ -1.18
HMGB1P16-201ENST00000447155 IL2RAP01589 272 aa7.71□□□□□ -1.18
HMGB1P16-201ENST00000447155 IGFBP4P22692 258 aa7.71□□□□□ -1.18
HMGB1P16-201ENST00000447155 PTGIRP43119 386 aa7.71□□□□□ -1.18
HMGB1P16-201ENST00000447155 EPHA4P54764 986 aa7.71□□□□□ -1.18
HMGB1P16-201ENST00000447155 CLN3Q13286 438 aa7.71□□□□□ -1.18
HMGB1P16-201ENST00000447155 KDF1Q8NAX2 398 aaPredicted RBP7.71□□□□□ -1.18
HMGB1P16-201ENST00000447155 GAS2L2Q8NHY3 880 aa7.71□□□□□ -1.18
HMGB1P16-201ENST00000447155 ESYT1Q9BSJ8 1104 aa7.71□□□□□ -1.18
HMGB1P16-201ENST00000447155 A6NJY4 79 aa7.7□□□□□ -1.18
HMGB1P16-201ENST00000447155 SMTNP53814 917 aa7.7□□□□□ -1.18
HMGB1P16-201ENST00000447155 MTFR1Q15390 333 aa7.7□□□□□ -1.18
HMGB1P16-201ENST00000447155 SND1Q7KZF4 910 aaKnown RBP eCLIP7.7□□□□□ -1.18
HMGB1P16-201ENST00000447155 SCG3Q8WXD2 468 aaKnown RBP7.7□□□□□ -1.18
HMGB1P16-201ENST00000447155 CNKSR1Q969H4 720 aa7.7□□□□□ -1.18
HMGB1P16-201ENST00000447155 A0A1W2PRU2 124 aa7.69□□□□□ -1.18
HMGB1P16-201ENST00000447155 FOXO3O43524 673 aa7.69□□□□□ -1.18
HMGB1P16-201ENST00000447155 FOXK2Q01167 660 aa7.69□□□□□ -1.18
HMGB1P16-201ENST00000447155 MEIOBQ8N635 442 aa7.69□□□□□ -1.18
HMGB1P16-201ENST00000447155 HPS1Q92902 700 aa7.69□□□□□ -1.18
HMGB1P16-201ENST00000447155 AGBL1Q96MI9 1066 aa7.69□□□□□ -1.18
HMGB1P16-201ENST00000447155 TSPAN10Q9H1Z9 355 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P16-201ENST00000447155 SCHIP1Q9P0W5 487 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P16-201ENST00000447155 HRH3Q9Y5N1 445 aa7.69□□□□□ -1.18
HMGB1P16-201ENST00000447155 ATAD2Q6PL18 1390 aa7.69□□□□□ -1.18
HMGB1P16-201ENST00000447155 RELBQ01201 579 aa7.68□□□□□ -1.18
HMGB1P16-201ENST00000447155 FKBP5Q13451 457 aaPredicted RBP7.68□□□□□ -1.18
HMGB1P16-201ENST00000447155 TLR1Q15399 786 aa7.68□□□□□ -1.18
HMGB1P16-201ENST00000447155 COL26A1Q96A83 441 aa7.68□□□□□ -1.18
HMGB1P16-201ENST00000447155 NLRP3Q96P20 1036 aa7.68□□□□□ -1.18
HMGB1P16-201ENST00000447155 MEN1O00255 615 aa7.67□□□□□ -1.18
HMGB1P16-201ENST00000447155 CDK2AP1O14519 115 aa7.67□□□□□ -1.18
HMGB1P16-201ENST00000447155 C21orf2O43822 256 aa7.67□□□□□ -1.18
HMGB1P16-201ENST00000447155 PTCD1O75127 700 aaKnown RBP7.67□□□□□ -1.18
HMGB1P16-201ENST00000447155 SCNN1AP37088 669 aa7.67□□□□□ -1.18
HMGB1P16-201ENST00000447155 SLC9A9Q8IVB4 645 aa7.67□□□□□ -1.18
HMGB1P16-201ENST00000447155 STAG2Q8N3U4 1231 aa7.67□□□□□ -1.18
HMGB1P16-201ENST00000447155 NBPF15Q8N660 670 aa7.67□□□□□ -1.18
HMGB1P16-201ENST00000447155 PDZRN3Q9UPQ7 1066 aa7.67□□□□□ -1.18
HMGB1P16-201ENST00000447155 PPP1R12BO60237 982 aaPredicted RBP7.66□□□□□ -1.18
HMGB1P16-201ENST00000447155 SERPINB4P48594 390 aa7.66□□□□□ -1.18
HMGB1P16-201ENST00000447155 CENPCQ03188 943 aa7.66□□□□□ -1.18
HMGB1P16-201ENST00000447155 VTI1AQ96AJ9 217 aa7.66□□□□□ -1.18
HMGB1P16-201ENST00000447155 TSEN34Q9BSV6 310 aaKnown RBP7.66□□□□□ -1.18
HMGB1P16-201ENST00000447155 MKNK1Q9BUB5 465 aa7.66□□□□□ -1.18
HMGB1P16-201ENST00000447155 FHDC1Q9C0D6 1143 aaPredicted RBP7.66□□□□□ -1.18
HMGB1P16-201ENST00000447155 EGFL7Q9UHF1 273 aa7.66□□□□□ -1.18
HMGB1P16-201ENST00000447155 SOWAHDA6NJG2 315 aa7.65□□□□□ -1.18
HMGB1P16-201ENST00000447155 MFAP1P55081 439 aaKnown RBP7.65□□□□□ -1.18
HMGB1P16-201ENST00000447155 PSMA6P60900 246 aaKnown RBP7.65□□□□□ -1.18
HMGB1P16-201ENST00000447155 PURBQ96QR8 312 aaKnown RBP7.65□□□□□ -1.18
HMGB1P16-201ENST00000447155 ZNF395Q9H8N7 513 aaPredicted RBP7.65□□□□□ -1.18
HMGB1P16-201ENST00000447155 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.65□□□□□ -1.18
HMGB1P16-201ENST00000447155 IQSEC3Q9UPP2 1182 aaPredicted RBP7.65□□□□□ -1.18
HMGB1P16-201ENST00000447155 CAPN5O15484 640 aaPredicted RBP7.64□□□□□ -1.19
HMGB1P16-201ENST00000447155 GPC1P35052 558 aa7.64□□□□□ -1.19
HMGB1P16-201ENST00000447155 TBCELQ5QJ74 424 aa7.64□□□□□ -1.19
HMGB1P16-201ENST00000447155 CHMP7Q8WUX9 453 aaPredicted RBP7.64□□□□□ -1.19
HMGB1P16-201ENST00000447155 SEPT3Q9UH03 358 aa7.64□□□□□ -1.19
HMGB1P16-201ENST00000447155 CHMP3Q9Y3E7 222 aa7.64□□□□□ -1.19
HMGB1P16-201ENST00000447155 UPP2O95045 317 aa7.63□□□□□ -1.19
HMGB1P16-201ENST00000447155 ABL1P00519 1130 aa7.63□□□□□ -1.19
HMGB1P16-201ENST00000447155 GTF2E1P29083 439 aaPredicted RBP7.63□□□□□ -1.19
HMGB1P16-201ENST00000447155 CCDC27Q2M243 656 aa7.63□□□□□ -1.19
HMGB1P16-201ENST00000447155 PPARGC1BQ86YN6 1023 aaKnown RBP7.63□□□□□ -1.19
HMGB1P16-201ENST00000447155 GTF3C2Q8WUA4 911 aaPredicted RBP7.63□□□□□ -1.19
HMGB1P16-201ENST00000447155 ZSCAN10Q96SZ4 725 aaPredicted RBP7.63□□□□□ -1.19
HMGB1P16-201ENST00000447155 C2orf49Q9BVC5 232 aaPredicted RBP7.63□□□□□ -1.19
HMGB1P16-201ENST00000447155 USP3Q9Y6I4 520 aa7.63□□□□□ -1.19
HMGB1P16-201ENST00000447155 FAM187AA6NFU0 413 aa7.62□□□□□ -1.19
HMGB1P16-201ENST00000447155 SPINT1O43278 529 aa7.62□□□□□ -1.19
HMGB1P16-201ENST00000447155 TEAD4Q15561 434 aa7.62□□□□□ -1.19
HMGB1P16-201ENST00000447155 TMEM214Q6NUQ4 689 aaKnown RBP7.62□□□□□ -1.19
HMGB1P16-201ENST00000447155 POTEAQ6S8J7 498 aa7.62□□□□□ -1.19
HMGB1P16-201ENST00000447155 CAPN12Q6ZSI9 719 aa7.62□□□□□ -1.19
HMGB1P16-201ENST00000447155 LINC00528Q8N1L1 170 aa7.62□□□□□ -1.19
HMGB1P16-201ENST00000447155 ICMTO60725 284 aa7.61□□□□□ -1.19
HMGB1P16-201ENST00000447155 AVPP01185 164 aa7.61□□□□□ -1.19
HMGB1P16-201ENST00000447155 RNF144AP50876 292 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P16-201ENST00000447155 HIRAP54198 1017 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P16-201ENST00000447155 ZNF211Q13398 564 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P16-201ENST00000447155 SF3B2Q13435 895 aaKnown RBP7.61□□□□□ -1.19
HMGB1P16-201ENST00000447155 ZNF295-AS1Q8N0V1 137 aa7.61□□□□□ -1.19
HMGB1P16-201ENST00000447155 HELQQ8TDG4 1101 aa7.61□□□□□ -1.19
HMGB1P16-201ENST00000447155 INSM2Q96T92 566 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P16-201ENST00000447155 GRIP2Q9C0E4 1043 aa7.61□□□□□ -1.19
HMGB1P16-201ENST00000447155 DNMT3AQ9Y6K1 912 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms