RNA–Protein interactions for RNA: ENST00000446668.5

MANF-201, Transcript of mesencephalic astrocyte derived neurotrophic factor, humanhuman

TSL 3

Gene MANF, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MANF-201ENST00000446668 COL23A1Q86Y22 540 aaPredicted RBP28.03■■■□□ 2.08
MANF-201ENST00000446668 ATG3Q9NT62 314 aa28.03■■■□□ 2.08
MANF-201ENST00000446668 COL24A1Q17RW2 1714 aa28.03■■■□□ 2.08
MANF-201ENST00000446668 KDM6AO15550 1401 aaPredicted RBP28.01■■■□□ 2.08
MANF-201ENST00000446668 SSFA2P28290 1259 aa28.01■■■□□ 2.07
MANF-201ENST00000446668 HMOX1P09601 288 aa28■■■□□ 2.07
MANF-201ENST00000446668 ZNF831Q5JPB2 1677 aa28■■■□□ 2.07
MANF-201ENST00000446668 KLHL34Q8N239 644 aa27.99■■■□□ 2.07
MANF-201ENST00000446668 RBM42Q9BTD8 480 aaKnown RBP27.98■■■□□ 2.07
MANF-201ENST00000446668 U2SURPO15042 1029 aaKnown RBP27.97■■■□□ 2.07
MANF-201ENST00000446668 UBR3Q6ZT12 1888 aa27.97■■■□□ 2.07
MANF-201ENST00000446668 SCN11AQ9UI33 1791 aa27.96■■■□□ 2.07
MANF-201ENST00000446668 PHF14O94880 888 aa27.96■■■□□ 2.07
MANF-201ENST00000446668 LINC00116Q8NCU8 138 aa27.96■■■□□ 2.07
MANF-201ENST00000446668 NUDCQ9Y266 331 aa27.96■■■□□ 2.07
MANF-201ENST00000446668 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.95■■■□□ 2.06
MANF-201ENST00000446668 GNPATO15228 680 aa27.95■■■□□ 2.06
MANF-201ENST00000446668 COL3A1P02461 1466 aaPredicted RBP27.95■■■□□ 2.06
MANF-201ENST00000446668 NFATC2IPQ8NCF5 419 aa27.94■■■□□ 2.06
MANF-201ENST00000446668 ITPK1Q13572 414 aa27.93■■■□□ 2.06
MANF-201ENST00000446668 GAS2L2Q8NHY3 880 aa27.92■■■□□ 2.06
MANF-201ENST00000446668 RTCBQ9Y3I0 505 aaKnown RBP27.92■■■□□ 2.06
MANF-201ENST00000446668 YY1P25490 414 aa27.91■■■□□ 2.06
MANF-201ENST00000446668 MSL1Q68DK7 614 aa27.91■■■□□ 2.06
MANF-201ENST00000446668 SLC52A2Q9HAB3 445 aa27.91■■■□□ 2.06
MANF-201ENST00000446668 ADRA2BP18089 450 aa27.9■■■□□ 2.06
MANF-201ENST00000446668 RC3H1Q5TC82 1133 aaKnown RBP27.9■■■□□ 2.06
MANF-201ENST00000446668 CNTNAP4Q9C0A0 1308 aa27.9■■■□□ 2.06
MANF-201ENST00000446668 RNMTO43148 476 aaKnown RBP27.88■■■□□ 2.05
MANF-201ENST00000446668 MTHFSDQ2M296 383 aaKnown RBP27.88■■■□□ 2.05
MANF-201ENST00000446668 MRC1P22897 1456 aa27.88■■■□□ 2.05
MANF-201ENST00000446668 COL5A3P25940 1745 aaPredicted RBP27.87■■■□□ 2.05
MANF-201ENST00000446668 PTCD1O75127 700 aaKnown RBP27.87■■■□□ 2.05
MANF-201ENST00000446668 TRAPPC3LQ5T215 181 aa27.87■■■□□ 2.05
MANF-201ENST00000446668 PPP2R1AP30153 589 aa27.86■■■□□ 2.05
MANF-201ENST00000446668 GPR162Q16538 588 aa27.86■■■□□ 2.05
MANF-201ENST00000446668 CD2APQ9Y5K6 639 aa27.85■■■□□ 2.05
MANF-201ENST00000446668 VIRMAQ69YN4 1812 aaKnown RBP27.85■■■□□ 2.05
MANF-201ENST00000446668 CICQ96RK0 1608 aaPredicted RBP27.84■■■□□ 2.05
MANF-201ENST00000446668 GNAT3A8MTJ3 354 aa27.83■■■□□ 2.05
MANF-201ENST00000446668 ADAMTS7Q9UKP4 1686 aa27.82■■■□□ 2.04
MANF-201ENST00000446668 RFC4P35249 363 aa27.82■■■□□ 2.04
MANF-201ENST00000446668 SLC4A9Q96Q91 983 aa27.82■■■□□ 2.04
MANF-201ENST00000446668 LGR6Q9HBX8 967 aa27.82■■■□□ 2.04
MANF-201ENST00000446668 RPS6KA4O75676 772 aa27.81■■■□□ 2.04
MANF-201ENST00000446668 TEFQ10587 303 aa27.81■■■□□ 2.04
MANF-201ENST00000446668 TTC5Q8N0Z6 440 aa27.81■■■□□ 2.04
MANF-201ENST00000446668 NEFMP07197 916 aa27.8■■■□□ 2.04
MANF-201ENST00000446668 U2AF1L5P0DN76 240 aaPredicted RBP27.8■■■□□ 2.04
MANF-201ENST00000446668 U2AF1Q01081 240 aaKnown RBP eCLIP27.8■■■□□ 2.04
MANF-201ENST00000446668 AMIGO3Q86WK7 504 aa27.8■■■□□ 2.04
MANF-201ENST00000446668 PELP1Q8IZL8 1130 aaKnown RBP27.8■■■□□ 2.04
MANF-201ENST00000446668 NLGN1Q8N2Q7 840 aa27.8■■■□□ 2.04
MANF-201ENST00000446668 PRKAR2BP31323 418 aa27.79■■■□□ 2.04
MANF-201ENST00000446668 CRKLP46109 303 aaKnown RBP27.78■■■□□ 2.04
MANF-201ENST00000446668 CHD4Q14839 1912 aa27.77■■■□□ 2.04
MANF-201ENST00000446668 FCHSD2O94868 740 aa27.77■■■□□ 2.04
MANF-201ENST00000446668 RSPH6AQ9H0K4 717 aa27.77■■■□□ 2.04
MANF-201ENST00000446668 TJP1Q07157 1748 aa27.76■■■□□ 2.03
MANF-201ENST00000446668 GRIN3BO60391 1043 aa27.76■■■□□ 2.03
MANF-201ENST00000446668 VSIG10Q8N0Z9 540 aa27.76■■■□□ 2.03
MANF-201ENST00000446668 NLGN2Q8NFZ4 835 aa27.76■■■□□ 2.03
MANF-201ENST00000446668 ARHGEF1Q92888 912 aaKnown RBP27.75■■■□□ 2.03
MANF-201ENST00000446668 SMIM5Q71RC9 77 aa27.74■■■□□ 2.03
MANF-201ENST00000446668 RTF1Q92541 710 aaKnown RBP27.74■■■□□ 2.03
MANF-201ENST00000446668 MMP10P09238 476 aa27.73■■■□□ 2.03
MANF-201ENST00000446668 SLC39A6Q13433 755 aa27.73■■■□□ 2.03
MANF-201ENST00000446668 MYH14Q7Z406 1995 aaKnown RBP27.72■■■□□ 2.03
MANF-201ENST00000446668 CCDC87Q9NVE4 849 aa27.72■■■□□ 2.03
MANF-201ENST00000446668 PNNQ9H307 717 aaKnown RBP27.71■■■□□ 2.03
MANF-201ENST00000446668 KCPQ6ZWJ8 1503 aa27.71■■■□□ 2.03
MANF-201ENST00000446668 STARD3NLO95772 234 aa27.7■■■□□ 2.02
MANF-201ENST00000446668 DNAJC10Q8IXB1 793 aa27.7■■■□□ 2.02
MANF-201ENST00000446668 TEX13AQ9BXU3 409 aaPredicted RBP27.7■■■□□ 2.02
MANF-201ENST00000446668 C4AP0C0L4 1744 aa27.7■■■□□ 2.02
MANF-201ENST00000446668 UBR2Q8IWV8 1755 aa27.69■■■□□ 2.02
MANF-201ENST00000446668 RALBP1Q15311 655 aa27.69■■■□□ 2.02
MANF-201ENST00000446668 PARP3Q9Y6F1 533 aa27.69■■■□□ 2.02
MANF-201ENST00000446668 ZPR1O75312 459 aa27.68■■■□□ 2.02
MANF-201ENST00000446668 GYS1P13807 737 aa27.68■■■□□ 2.02
MANF-201ENST00000446668 ZNF790Q6PG37 636 aa27.67■■■□□ 2.02
MANF-201ENST00000446668 IL17REQ8NFR9 667 aa27.67■■■□□ 2.02
MANF-201ENST00000446668 PHACTR3Q96KR7 559 aa27.67■■■□□ 2.02
MANF-201ENST00000446668 CEMIPQ8WUJ3 1361 aa27.67■■■□□ 2.02
MANF-201ENST00000446668 USP42Q9H9J4 1324 aaKnown RBP27.67■■■□□ 2.02
MANF-201ENST00000446668 HTATSF1O43719 755 aaKnown RBP27.66■■■□□ 2.02
MANF-201ENST00000446668 CYP19A1P11511 503 aaPredicted RBP27.66■■■□□ 2.02
MANF-201ENST00000446668 UTRNP46939 3433 aa27.66■■■□□ 2.02
MANF-201ENST00000446668 INTS5Q6P9B9 1019 aaKnown RBP27.65■■■□□ 2.02
MANF-201ENST00000446668 FMNL2Q96PY5 1086 aa27.65■■■□□ 2.02
MANF-201ENST00000446668 SIPA1L3O60292 1781 aaPredicted RBP27.65■■■□□ 2.02
MANF-201ENST00000446668 BTBD11A6QL63 1104 aa27.64■■■□□ 2.02
MANF-201ENST00000446668 NPM2Q86SE8 214 aaKnown RBP27.64■■■□□ 2.02
MANF-201ENST00000446668 SOS1Q07889 1333 aaPredicted RBP27.64■■■□□ 2.01
MANF-201ENST00000446668 COL15A1P39059 1388 aa27.62■■■□□ 2.01
MANF-201ENST00000446668 HEG1Q9ULI3 1381 aa27.62■■■□□ 2.01
MANF-201ENST00000446668 TGFB2P61812 414 aa27.62■■■□□ 2.01
MANF-201ENST00000446668 A0A087WZG4 1122 aa27.61■■■□□ 2.01
MANF-201ENST00000446668 MAPK8IP3Q9UPT6 1336 aa27.61■■■□□ 2.01
MANF-201ENST00000446668 YBX3P16989 372 aaKnown RBP eCLIP27.6■■■□□ 2.014e-8■■□□□ 13
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms