RNA–Protein interactions for RNA: ENST00000446553.2

CDCA3-203, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-203ENST00000446553 DIAPH1O60610 1272 aaKnown RBP15.26■□□□□ 0.03
CDCA3-203ENST00000446553 AKAP4Q5JQC9 854 aa15.26■□□□□ 0.03
CDCA3-203ENST00000446553 CC2D1BQ5T0F9 858 aaKnown RBP15.26■□□□□ 0.03
CDCA3-203ENST00000446553 SCN11AQ9UI33 1791 aa15.26■□□□□ 0.03
CDCA3-203ENST00000446553 ATP6V1AP38606 617 aa15.25■□□□□ 0.03
CDCA3-203ENST00000446553 CABP4P57796 275 aa15.25■□□□□ 0.03
CDCA3-203ENST00000446553 LINC00116Q8NCU8 138 aa15.25■□□□□ 0.03
CDCA3-203ENST00000446553 COL3A1P02461 1466 aaPredicted RBP15.25■□□□□ 0.03
CDCA3-203ENST00000446553 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.24■□□□□ 0.03
CDCA3-203ENST00000446553 MSH5O43196 834 aa15.24■□□□□ 0.03
CDCA3-203ENST00000446553 YY1P25490 414 aa15.24■□□□□ 0.03
CDCA3-203ENST00000446553 ITPK1Q13572 414 aa15.24■□□□□ 0.03
CDCA3-203ENST00000446553 RC3H1Q5TC82 1133 aaKnown RBP15.24■□□□□ 0.03
CDCA3-203ENST00000446553 CICQ96RK0 1608 aaPredicted RBP15.24■□□□□ 0.03
CDCA3-203ENST00000446553 CHD4Q14839 1912 aa15.23■□□□□ 0.03
CDCA3-203ENST00000446553 ADAMTS7Q9UKP4 1686 aa15.22■□□□□ 0.03
CDCA3-203ENST00000446553 CNTNAP4Q9C0A0 1308 aa15.22■□□□□ 0.03
CDCA3-203ENST00000446553 MRC1P22897 1456 aa15.22■□□□□ 0.03
CDCA3-203ENST00000446553 ADRA2BP18089 450 aa15.22■□□□□ 0.03
CDCA3-203ENST00000446553 SLC4A9Q96Q91 983 aa15.22■□□□□ 0.03
CDCA3-203ENST00000446553 COL5A3P25940 1745 aaPredicted RBP15.22■□□□□ 0.03
CDCA3-203ENST00000446553 AMIGO3Q86WK7 504 aa15.21■□□□□ 0.03
CDCA3-203ENST00000446553 NFATC2IPQ8NCF5 419 aa15.21■□□□□ 0.03
CDCA3-203ENST00000446553 CD2APQ9Y5K6 639 aa15.21■□□□□ 0.03
CDCA3-203ENST00000446553 GNPATO15228 680 aa15.2■□□□□ 0.02
CDCA3-203ENST00000446553 HMOX1P09601 288 aa15.2■□□□□ 0.02
CDCA3-203ENST00000446553 RBM42Q9BTD8 480 aaKnown RBP15.2■□□□□ 0.02
CDCA3-203ENST00000446553 SLC52A2Q9HAB3 445 aa15.2■□□□□ 0.02
CDCA3-203ENST00000446553 GOLGB1Q14789 3259 aaKnown RBP15.2■□□□□ 0.02
CDCA3-203ENST00000446553 MYH14Q7Z406 1995 aaKnown RBP15.19■□□□□ 0.02
CDCA3-203ENST00000446553 RTCBQ9Y3I0 505 aaKnown RBP15.19■□□□□ 0.02
CDCA3-203ENST00000446553 VIRMAQ69YN4 1812 aaKnown RBP15.19■□□□□ 0.02
CDCA3-203ENST00000446553 RNMTO43148 476 aaKnown RBP15.18■□□□□ 0.02
CDCA3-203ENST00000446553 RPS6KA4O75676 772 aa15.18■□□□□ 0.02
CDCA3-203ENST00000446553 PHF14O94880 888 aa15.18■□□□□ 0.02
CDCA3-203ENST00000446553 MTHFSDQ2M296 383 aaKnown RBP15.18■□□□□ 0.02
CDCA3-203ENST00000446553 MSL1Q68DK7 614 aa15.18■□□□□ 0.02
CDCA3-203ENST00000446553 CFAP53Q96M91 514 aa15.18■□□□□ 0.02
CDCA3-203ENST00000446553 GPR162Q16538 588 aa15.17■□□□□ 0.02
CDCA3-203ENST00000446553 TRAPPC3LQ5T215 181 aa15.17■□□□□ 0.02
CDCA3-203ENST00000446553 NLGN2Q8NFZ4 835 aa15.17■□□□□ 0.02
CDCA3-203ENST00000446553 NLGN1Q8N2Q7 840 aa15.16■□□□□ 0.02
CDCA3-203ENST00000446553 GAS2L2Q8NHY3 880 aa15.16■□□□□ 0.02
CDCA3-203ENST00000446553 LGR6Q9HBX8 967 aa15.16■□□□□ 0.02
CDCA3-203ENST00000446553 GRIN3BO60391 1043 aa15.15■□□□□ 0.02
CDCA3-203ENST00000446553 PTCD1O75127 700 aaKnown RBP15.15■□□□□ 0.02
CDCA3-203ENST00000446553 VSIG10Q8N0Z9 540 aa15.15■□□□□ 0.02
CDCA3-203ENST00000446553 KLHL34Q8N239 644 aa15.15■□□□□ 0.02
CDCA3-203ENST00000446553 NUDCQ9Y266 331 aa15.15■□□□□ 0.02
CDCA3-203ENST00000446553 TJP1Q07157 1748 aa15.14■□□□□ 0.01
CDCA3-203ENST00000446553 U2SURPO15042 1029 aaKnown RBP15.14■□□□□ 0.01
CDCA3-203ENST00000446553 PPP2R1AP30153 589 aa15.14■□□□□ 0.01
CDCA3-203ENST00000446553 CRKLP46109 303 aaKnown RBP15.14■□□□□ 0.01
CDCA3-203ENST00000446553 ARHGEF1Q92888 912 aaKnown RBP15.14■□□□□ 0.01
CDCA3-203ENST00000446553 GNAT3A8MTJ3 354 aa15.13■□□□□ 0.01
CDCA3-203ENST00000446553 SMIM5Q71RC9 77 aa15.13■□□□□ 0.01
CDCA3-203ENST00000446553 KIF13BQ9NQT8 1826 aa15.13■□□□□ 0.01
CDCA3-203ENST00000446553 UBR2Q8IWV8 1755 aa15.12■□□□□ 0.01
CDCA3-203ENST00000446553 RFC4P35249 363 aa15.12■□□□□ 0.01
CDCA3-203ENST00000446553 RSPH6AQ9H0K4 717 aa15.12■□□□□ 0.01
CDCA3-203ENST00000446553 KCPQ6ZWJ8 1503 aa15.12■□□□□ 0.01
CDCA3-203ENST00000446553 C4AP0C0L4 1744 aa15.12■□□□□ 0.01
CDCA3-203ENST00000446553 CEMIPQ8WUJ3 1361 aa15.11■□□□□ 0.01
CDCA3-203ENST00000446553 FCHSD2O94868 740 aa15.11■□□□□ 0.01
CDCA3-203ENST00000446553 MMP10P09238 476 aa15.11■□□□□ 0.01
CDCA3-203ENST00000446553 GYS1P13807 737 aa15.11■□□□□ 0.01
CDCA3-203ENST00000446553 INTS5Q6P9B9 1019 aaKnown RBP15.1■□□□□ 0.01
CDCA3-203ENST00000446553 IL17REQ8NFR9 667 aa15.1■□□□□ 0.01
CDCA3-203ENST00000446553 CCDC87Q9NVE4 849 aa15.1■□□□□ 0.01
CDCA3-203ENST00000446553 SIPA1L3O60292 1781 aaPredicted RBP15.1■□□□□ 0.01
CDCA3-203ENST00000446553 CYP19A1P11511 503 aaPredicted RBP15.09■□□□□ 0.01
CDCA3-203ENST00000446553 YBX3P16989 372 aaKnown RBP eCLIP15.09■□□□□ 0.01
CDCA3-203ENST00000446553 PRKAR2BP31323 418 aa15.09■□□□□ 0.01
CDCA3-203ENST00000446553 TEFQ10587 303 aa15.09■□□□□ 0.01
CDCA3-203ENST00000446553 SLC39A6Q13433 755 aa15.09■□□□□ 0.01
CDCA3-203ENST00000446553 CNGB1Q14028 1251 aaPredicted RBP15.09■□□□□ 0.01
CDCA3-203ENST00000446553 DNAJC10Q8IXB1 793 aa15.09■□□□□ 0.01
CDCA3-203ENST00000446553 ZNF784Q8NCA9 323 aaPredicted RBP15.09■□□□□ 0.01
CDCA3-203ENST00000446553 USP42Q9H9J4 1324 aaKnown RBP15.09■□□□□ 0.01
CDCA3-203ENST00000446553 TGFB2P61812 414 aa15.08■□□□□ 0
CDCA3-203ENST00000446553 TEX13AQ9BXU3 409 aaPredicted RBP15.08■□□□□ 0
CDCA3-203ENST00000446553 SOS1Q07889 1333 aaPredicted RBP15.08■□□□□ 0
CDCA3-203ENST00000446553 C10orf71Q711Q0 1435 aa15.08■□□□□ 0
CDCA3-203ENST00000446553 HTATSF1O43719 755 aaKnown RBP15.07■□□□□ 0
CDCA3-203ENST00000446553 U2AF1L5P0DN76 240 aaPredicted RBP15.07■□□□□ 0
CDCA3-203ENST00000446553 U2AF1Q01081 240 aaKnown RBP eCLIP15.07■□□□□ 0
CDCA3-203ENST00000446553 ZNF790Q6PG37 636 aa15.07■□□□□ 0
CDCA3-203ENST00000446553 PELP1Q8IZL8 1130 aaKnown RBP15.07■□□□□ 0
CDCA3-203ENST00000446553 TTC5Q8N0Z6 440 aa15.07■□□□□ 0
CDCA3-203ENST00000446553 PHACTR3Q96KR7 559 aa15.07■□□□□ 0
CDCA3-203ENST00000446553 PARP3Q9Y6F1 533 aa15.06■□□□□ 0
CDCA3-203ENST00000446553 STARD3NLO95772 234 aa15.05■□□□□ -0
CDCA3-203ENST00000446553 KIAA1551Q9HCM1 1747 aa15.05■□□□□ -0
CDCA3-203ENST00000446553 PXDNLA1KZ92 1463 aa15.04■□□□□ -0
CDCA3-203ENST00000446553 COL15A1P39059 1388 aa15.04■□□□□ -0
CDCA3-203ENST00000446553 HEG1Q9ULI3 1381 aa15.04■□□□□ -0
CDCA3-203ENST00000446553 ZPR1O75312 459 aa15.04■□□□□ -0
CDCA3-203ENST00000446553 NARFQ9UHQ1 456 aa15.04■□□□□ -0
CDCA3-203ENST00000446553 TM4SF1P30408 202 aa15.03■□□□□ -0
CDCA3-203ENST00000446553 FKBP8Q14318 412 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms