RNA–Protein interactions for RNA: ENST00000445569.6

CALD1-211, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-211ENST00000445569 CSB-PGBD3P0DP91 1061 aa13.23□□□□□ -0.29
CALD1-211ENST00000445569 TAF7Q15545 349 aaPredicted RBP13.23□□□□□ -0.29
CALD1-211ENST00000445569 TMEM57Q8N5G2 664 aa13.23□□□□□ -0.29
CALD1-211ENST00000445569 STK31Q9BXU1 1019 aa13.23□□□□□ -0.29
CALD1-211ENST00000445569 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.23□□□□□ -0.291e-6■□□□□ 9.2
CALD1-211ENST00000445569 TNNQ9UQP3 1299 aa13.23□□□□□ -0.29
CALD1-211ENST00000445569 RBM19Q9Y4C8 960 aaKnown RBP13.23□□□□□ -0.29
CALD1-211ENST00000445569 ELL2O00472 640 aaPredicted RBP13.22□□□□□ -0.29
CALD1-211ENST00000445569 TATP17735 454 aaPredicted RBP13.22□□□□□ -0.29
CALD1-211ENST00000445569 RXRBP28702 533 aa13.22□□□□□ -0.29
CALD1-211ENST00000445569 TEFQ10587 303 aa13.22□□□□□ -0.29
CALD1-211ENST00000445569 NGLY1Q96IV0 654 aa13.22□□□□□ -0.29
CALD1-211ENST00000445569 NLRP2Q9NX02 1062 aa13.22□□□□□ -0.29
CALD1-211ENST00000445569 SPG7Q9UQ90 795 aa13.22□□□□□ -0.29
CALD1-211ENST00000445569 PLEKHG5O94827 1062 aa13.21□□□□□ -0.29
CALD1-211ENST00000445569 HDAC1Q13547 482 aaPredicted RBP13.21□□□□□ -0.29
CALD1-211ENST00000445569 CCDC30Q5VVM6 783 aa13.21□□□□□ -0.29
CALD1-211ENST00000445569 AXIN2Q9Y2T1 843 aa13.21□□□□□ -0.29
CALD1-211ENST00000445569 MEGF6O75095 1541 aa13.21□□□□□ -0.29
CALD1-211ENST00000445569 COL14A1Q05707 1796 aaKnown RBP13.21□□□□□ -0.29
CALD1-211ENST00000445569 COL5A2P05997 1499 aaPredicted RBP13.21□□□□□ -0.3
CALD1-211ENST00000445569 RGS12O14924 1447 aa13.21□□□□□ -0.3
CALD1-211ENST00000445569 FNBP4Q8N3X1 1017 aaPredicted RBP13.2□□□□□ -0.3
CALD1-211ENST00000445569 IL17REQ8NFR9 667 aa13.2□□□□□ -0.3
CALD1-211ENST00000445569 QTRT2Q9H974 415 aaKnown RBP13.2□□□□□ -0.3
CALD1-211ENST00000445569 PRDM11Q9NQV5 511 aa13.2□□□□□ -0.3
CALD1-211ENST00000445569 ZBTB40Q9NUA8 1239 aa13.2□□□□□ -0.3
CALD1-211ENST00000445569 PLCH1Q4KWH8 1693 aa13.2□□□□□ -0.3
CALD1-211ENST00000445569 WDR17Q8IZU2 1322 aa13.19□□□□□ -0.3
CALD1-211ENST00000445569 RNMTO43148 476 aaKnown RBP13.19□□□□□ -0.3
CALD1-211ENST00000445569 HSP90AB1P08238 724 aaKnown RBP13.18□□□□□ -0.3
CALD1-211ENST00000445569 INTS3Q68E01 1043 aaKnown RBP13.18□□□□□ -0.3
CALD1-211ENST00000445569 CABLES1Q8TDN4 633 aa13.18□□□□□ -0.3
CALD1-211ENST00000445569 PCDHB15Q9Y5E8 787 aa13.18□□□□□ -0.3
CALD1-211ENST00000445569 IGHDP01880 384 aa13.17□□□□□ -0.3
CALD1-211ENST00000445569 RBM6P78332 1123 aaKnown RBP13.17□□□□□ -0.3
CALD1-211ENST00000445569 KRT24Q2M2I5 525 aa13.17□□□□□ -0.3
CALD1-211ENST00000445569 USP21Q9UK80 565 aa13.17□□□□□ -0.3
CALD1-211ENST00000445569 LAMB4A4D0S4 1761 aa13.17□□□□□ -0.3
CALD1-211ENST00000445569 CCT4P50991 539 aaKnown RBP13.16□□□□□ -0.3
CALD1-211ENST00000445569 CHRNA2Q15822 529 aa13.16□□□□□ -0.3
CALD1-211ENST00000445569 PIAS4Q8N2W9 510 aaPredicted RBP13.16□□□□□ -0.3
CALD1-211ENST00000445569 WNK3Q9BYP7 1800 aa13.16□□□□□ -0.3
CALD1-211ENST00000445569 KDM6AO15550 1401 aaPredicted RBP13.15□□□□□ -0.3
CALD1-211ENST00000445569 SLC4A2P04920 1241 aa13.15□□□□□ -0.3
CALD1-211ENST00000445569 HDGFL1Q5TGJ6 251 aa13.15□□□□□ -0.3
CALD1-211ENST00000445569 IFNL2Q8IZJ0 200 aa13.15□□□□□ -0.3
CALD1-211ENST00000445569 MIS18AQ9NYP9 233 aa13.15□□□□□ -0.3
CALD1-211ENST00000445569 PCDH11XQ9BZA7 1347 aa13.14□□□□□ -0.31
CALD1-211ENST00000445569 PCDH11YQ9BZA8 1340 aa13.14□□□□□ -0.31
CALD1-211ENST00000445569 BTBD11A6QL63 1104 aa13.14□□□□□ -0.31
CALD1-211ENST00000445569 ZBTB7BO15156 539 aaPredicted RBP13.14□□□□□ -0.31
CALD1-211ENST00000445569 PHKG2P15735 406 aa13.14□□□□□ -0.31
CALD1-211ENST00000445569 ANP32AP39687 249 aaKnown RBP13.14□□□□□ -0.31
CALD1-211ENST00000445569 EIF4A1P60842 406 aaKnown RBP13.14□□□□□ -0.31
CALD1-211ENST00000445569 FAM161AQ3B820 660 aa13.14□□□□□ -0.31
CALD1-211ENST00000445569 BACH2Q9BYV9 841 aa13.14□□□□□ -0.31
CALD1-211ENST00000445569 TRPC5Q9UL62 973 aaPredicted RBP13.14□□□□□ -0.31
CALD1-211ENST00000445569 SHANK3Q9BYB0 1731 aa13.13□□□□□ -0.31
CALD1-211ENST00000445569 PDE4AP27815 886 aa13.13□□□□□ -0.31
CALD1-211ENST00000445569 FLIIQ13045 1269 aa13.13□□□□□ -0.31
CALD1-211ENST00000445569 MPRIPQ6WCQ1 1025 aa13.13□□□□□ -0.31
CALD1-211ENST00000445569 SMC5Q8IY18 1101 aa13.13□□□□□ -0.31
CALD1-211ENST00000445569 GCC1Q96CN9 775 aa13.13□□□□□ -0.31
CALD1-211ENST00000445569 DCAF5Q96JK2 942 aa13.13□□□□□ -0.31
CALD1-211ENST00000445569 PAPPAQ13219 1627 aa13.13□□□□□ -0.31
CALD1-211ENST00000445569 RGS3P49796 1198 aa13.12□□□□□ -0.31
CALD1-211ENST00000445569 FKBP5Q13451 457 aaPredicted RBP13.12□□□□□ -0.31
CALD1-211ENST00000445569 TOM1L2Q6ZVM7 507 aa13.12□□□□□ -0.31
CALD1-211ENST00000445569 CARD10Q9BWT7 1032 aa13.12□□□□□ -0.31
CALD1-211ENST00000445569 SLC52A2Q9HAB3 445 aa13.12□□□□□ -0.31
CALD1-211ENST00000445569 LGR6Q9HBX8 967 aa13.12□□□□□ -0.31
CALD1-211ENST00000445569 ATP10DQ9P241 1426 aa13.12□□□□□ -0.31
CALD1-211ENST00000445569 C5P01031 1676 aa13.12□□□□□ -0.31
CALD1-211ENST00000445569 HEG1Q9ULI3 1381 aa13.11□□□□□ -0.31
CALD1-211ENST00000445569 UPF1Q92900 1129 aaKnown RBP eCLIP13.11□□□□□ -0.31
CALD1-211ENST00000445569 PDZRN3Q9UPQ7 1066 aa13.11□□□□□ -0.31
CALD1-211ENST00000445569 BCL9LQ86UU0 1499 aa13.1□□□□□ -0.31
CALD1-211ENST00000445569 UBR2Q8IWV8 1755 aa13.1□□□□□ -0.31
CALD1-211ENST00000445569 HMMRO75330 724 aa13.09□□□□□ -0.31
CALD1-211ENST00000445569 ATRNO75882 1429 aa13.09□□□□□ -0.31
CALD1-211ENST00000445569 GNAI3P08754 354 aa13.09□□□□□ -0.31
CALD1-211ENST00000445569 IL2RBP14784 551 aa13.09□□□□□ -0.31
CALD1-211ENST00000445569 UNC5CLQ8IV45 518 aa13.09□□□□□ -0.31
CALD1-211ENST00000445569 RPAP2Q8IXW5 612 aaPredicted RBP13.09□□□□□ -0.31
CALD1-211ENST00000445569 DBF4Q9UBU7 674 aaPredicted RBP13.09□□□□□ -0.31
CALD1-211ENST00000445569 NWD2Q9ULI1 1742 aa13.09□□□□□ -0.31
CALD1-211ENST00000445569 NRAPQ86VF7 1730 aa13.08□□□□□ -0.32
CALD1-211ENST00000445569 EVA1CP58658 441 aa13.08□□□□□ -0.32
CALD1-211ENST00000445569 TTC5Q8N0Z6 440 aa13.08□□□□□ -0.32
CALD1-211ENST00000445569 GJD4Q96KN9 370 aaPredicted RBP13.08□□□□□ -0.32
CALD1-211ENST00000445569 NUCB1Q02818 461 aa13.07□□□□□ -0.32
CALD1-211ENST00000445569 ANKRD44Q8N8A2 993 aa13.07□□□□□ -0.32
CALD1-211ENST00000445569 ZCRB1Q8TBF4 217 aaKnown RBP13.07□□□□□ -0.32
CALD1-211ENST00000445569 ZBTB47Q9UFB7 747 aaPredicted RBP13.07□□□□□ -0.32
CALD1-211ENST00000445569 GLI3P10071 1580 aa13.07□□□□□ -0.32
CALD1-211ENST00000445569 CYP27B1O15528 508 aa13.06□□□□□ -0.32
CALD1-211ENST00000445569 GIGYF1O75420 1035 aaPredicted RBP13.06□□□□□ -0.32
CALD1-211ENST00000445569 ADRA2BP18089 450 aa13.06□□□□□ -0.32
CALD1-211ENST00000445569 C8orf34Q49A92 452 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms