RNA–Protein interactions for RNA: ENST00000444523.1

CCDC117-204, Transcript of coiled-coil domain containing 117, human

TSL 4

Gene CCDC117, Length 463 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC117-204	ENST00000444523	KDR	P35968	1356 aa		33.21	■■■□□ 2.91
CCDC117-204	ENST00000444523	PHF14	O94880	888 aa		33.21	■■■□□ 2.91
CCDC117-204	ENST00000444523	ZEB1	P37275	1124 aa	Predicted RBP	33.21	■■■□□ 2.91
CCDC117-204	ENST00000444523	YBX3	P16989	372 aa	Known RBP eCLIP	33.2	■■■□□ 2.91
CCDC117-204	ENST00000444523	IL13	P35225	146 aa		33.2	■■■□□ 2.91
CCDC117-204	ENST00000444523	PLEKHO1	Q53GL0	409 aa	Predicted RBP	33.2	■■■□□ 2.91
CCDC117-204	ENST00000444523	ERVV-2	B6SEH9	535 aa		33.19	■■■□□ 2.9
CCDC117-204	ENST00000444523	ATP6V1A	P38606	617 aa		33.19	■■■□□ 2.9
CCDC117-204	ENST00000444523	ZNF831	Q5JPB2	1677 aa		33.18	■■■□□ 2.9
CCDC117-204	ENST00000444523	SSFA2	P28290	1259 aa		33.18	■■■□□ 2.9
CCDC117-204	ENST00000444523	ZNF530	Q6P9A1	599 aa	Predicted RBP	33.18	■■■□□ 2.9
CCDC117-204	ENST00000444523	PELP1	Q8IZL8	1130 aa	Known RBP	33.18	■■■□□ 2.9
CCDC117-204	ENST00000444523	DCAF5	Q96JK2	942 aa		33.18	■■■□□ 2.9
CCDC117-204	ENST00000444523	PER1	O15534	1290 aa	Predicted RBP	33.17	■■■□□ 2.9
CCDC117-204	ENST00000444523	SULT6B1	Q6IMI4	303 aa		33.16	■■■□□ 2.9
CCDC117-204	ENST00000444523	COL5A3	P25940	1745 aa	Predicted RBP	33.16	■■■□□ 2.9
CCDC117-204	ENST00000444523	AMOT	Q4VCS5	1084 aa		33.15	■■■□□ 2.9
CCDC117-204	ENST00000444523	GNPAT	O15228	680 aa		33.14	■■■□□ 2.9
CCDC117-204	ENST00000444523	HSP90AB1	P08238	724 aa	Known RBP	33.14	■■■□□ 2.9
CCDC117-204	ENST00000444523	CD2AP	Q9Y5K6	639 aa		33.14	■■■□□ 2.9
CCDC117-204	ENST00000444523	MYH14	Q7Z406	1995 aa	Known RBP	33.14	■■■□□ 2.9
CCDC117-204	ENST00000444523	SCN11A	Q9UI33	1791 aa		33.11	■■■□□ 2.89
CCDC117-204	ENST00000444523	MTHFS	P49914	203 aa		33.09	■■■□□ 2.89
CCDC117-204	ENST00000444523	RBM42	Q9BTD8	480 aa	Known RBP	33.09	■■■□□ 2.89
CCDC117-204	ENST00000444523	CABP4	P57796	275 aa		33.08	■■■□□ 2.89
CCDC117-204	ENST00000444523	VIRMA	Q69YN4	1812 aa	Known RBP	33.06	■■■□□ 2.88
CCDC117-204	ENST00000444523	NFATC2IP	Q8NCF5	419 aa		33.05	■■■□□ 2.88
CCDC117-204	ENST00000444523	C1orf141	Q5JVX7	400 aa		33.04	■■■□□ 2.88
CCDC117-204	ENST00000444523	TJP1	Q07157	1748 aa		33.03	■■■□□ 2.88
CCDC117-204	ENST00000444523	GRIN3B	O60391	1043 aa		33.03	■■■□□ 2.88
CCDC117-204	ENST00000444523	RC3H1	Q5TC82	1133 aa	Known RBP	33.03	■■■□□ 2.88
CCDC117-204	ENST00000444523	CNTNAP4	Q9C0A0	1308 aa		33.02	■■■□□ 2.88
CCDC117-204	ENST00000444523	CC2D1B	Q5T0F9	858 aa	Known RBP	33.02	■■■□□ 2.88
CCDC117-204	ENST00000444523	C4A	P0C0L4	1744 aa		33.01	■■■□□ 2.87
CCDC117-204	ENST00000444523	KIF13B	Q9NQT8	1826 aa		33	■■■□□ 2.87
CCDC117-204	ENST00000444523	KIAA1551	Q9HCM1	1747 aa		33	■■■□□ 2.87
CCDC117-204	ENST00000444523	ARHGEF1	Q92888	912 aa	Known RBP	33	■■■□□ 2.87
CCDC117-204	ENST00000444523	RTCB	Q9Y3I0	505 aa	Known RBP	33	■■■□□ 2.87
CCDC117-204	ENST00000444523	CIC	Q96RK0	1608 aa	Predicted RBP	32.99	■■■□□ 2.87
CCDC117-204	ENST00000444523	PTCD1	O75127	700 aa	Known RBP	32.99	■■■□□ 2.87
CCDC117-204	ENST00000444523	HMOX1	P09601	288 aa		32.99	■■■□□ 2.87
CCDC117-204	ENST00000444523	TRAPPC3L	Q5T215	181 aa		32.99	■■■□□ 2.87
CCDC117-204	ENST00000444523	LGR6	Q9HBX8	967 aa		32.99	■■■□□ 2.87
CCDC117-204	ENST00000444523	RPS6KA4	O75676	772 aa		32.98	■■■□□ 2.87
CCDC117-204	ENST00000444523	MMP10	P09238	476 aa		32.97	■■■□□ 2.87
CCDC117-204	ENST00000444523	AKAP4	Q5JQC9	854 aa		32.97	■■■□□ 2.87
CCDC117-204	ENST00000444523	COL3A1	P02461	1466 aa	Predicted RBP	32.96	■■■□□ 2.87
CCDC117-204	ENST00000444523	ADAMTS7	Q9UKP4	1686 aa		32.96	■■■□□ 2.87
CCDC117-204	ENST00000444523	WWC3	Q9ULE0	1092 aa		32.95	■■■□□ 2.87
CCDC117-204	ENST00000444523	MRC1	P22897	1456 aa		32.94	■■■□□ 2.86
CCDC117-204	ENST00000444523	NPC1L1	Q9UHC9	1359 aa		32.94	■■■□□ 2.86
CCDC117-204	ENST00000444523	GYS1	P13807	737 aa		32.93	■■■□□ 2.86
CCDC117-204	ENST00000444523	ADRA2B	P18089	450 aa		32.93	■■■□□ 2.86
CCDC117-204	ENST00000444523	N4BP2	Q86UW6	1770 aa	Predicted RBP	32.93	■■■□□ 2.86
CCDC117-204	ENST00000444523	DIAPH1	O60610	1272 aa	Known RBP	32.92	■■■□□ 2.86
CCDC117-204	ENST00000444523	CRKL	P46109	303 aa	Known RBP	32.92	■■■□□ 2.86
CCDC117-204	ENST00000444523	MTHFSD	Q2M296	383 aa	Known RBP	32.92	■■■□□ 2.86
CCDC117-204	ENST00000444523	RNMT	O43148	476 aa	Known RBP	32.91	■■■□□ 2.86
CCDC117-204	ENST00000444523	SLC52A2	Q9HAB3	445 aa		32.91	■■■□□ 2.86
CCDC117-204	ENST00000444523	NLGN1	Q8N2Q7	840 aa		32.9	■■■□□ 2.86
CCDC117-204	ENST00000444523	PXDNL	A1KZ92	1463 aa		32.89	■■■□□ 2.86
CCDC117-204	ENST00000444523	C1QTNF8	P60827	252 aa		32.89	■■■□□ 2.86
CCDC117-204	ENST00000444523	CNGB1	Q14028	1251 aa	Predicted RBP	32.88	■■■□□ 2.85
CCDC117-204	ENST00000444523	INTS5	Q6P9B9	1019 aa	Known RBP	32.88	■■■□□ 2.85
CCDC117-204	ENST00000444523	C10orf71	Q711Q0	1435 aa		32.87	■■■□□ 2.85
CCDC117-204	ENST00000444523	RFC4	P35249	363 aa		32.87	■■■□□ 2.85
CCDC117-204	ENST00000444523	SLC39A6	Q13433	755 aa		32.87	■■■□□ 2.85
CCDC117-204	ENST00000444523	SRP68	Q9UHB9	627 aa	Known RBP	32.87	■■■□□ 2.85
CCDC117-204	ENST00000444523	KCP	Q6ZWJ8	1503 aa		32.87	■■■□□ 2.85
CCDC117-204	ENST00000444523	ADCY9	O60503	1353 aa		32.85	■■■□□ 2.85
CCDC117-204	ENST00000444523	DNAJC10	Q8IXB1	793 aa		32.85	■■■□□ 2.85
CCDC117-204	ENST00000444523	ATP10D	Q9P241	1426 aa		32.85	■■■□□ 2.85
CCDC117-204	ENST00000444523	BRCA1	P38398	1863 aa	Known RBP	32.83	■■■□□ 2.85
CCDC117-204	ENST00000444523	UBR2	Q8IWV8	1755 aa		32.82	■■■□□ 2.84
CCDC117-204	ENST00000444523	USP42	Q9H9J4	1324 aa	Known RBP	32.81	■■■□□ 2.84
CCDC117-204	ENST00000444523	FKBP8	Q14318	412 aa		32.81	■■■□□ 2.84
CCDC117-204	ENST00000444523		A0A0G2JLW4	131 aa		32.8	■■■□□ 2.84
CCDC117-204	ENST00000444523	GIGYF1	O75420	1035 aa	Predicted RBP	32.8	■■■□□ 2.84
CCDC117-204	ENST00000444523	TGFB2	P61812	414 aa		32.79	■■■□□ 2.84
CCDC117-204	ENST00000444523	CYP19A1	P11511	503 aa	Predicted RBP	32.78	■■■□□ 2.84
CCDC117-204	ENST00000444523	DDR1	Q08345	913 aa		32.78	■■■□□ 2.84
CCDC117-204	ENST00000444523	CCDC87	Q9NVE4	849 aa		32.77	■■■□□ 2.84
CCDC117-204	ENST00000444523	SIPA1L3	O60292	1781 aa	Predicted RBP	32.77	■■■□□ 2.84
CCDC117-204	ENST00000444523	SOS1	Q07889	1333 aa	Predicted RBP	32.77	■■■□□ 2.84
CCDC117-204	ENST00000444523	DPEP1	P16444	411 aa		32.76	■■■□□ 2.83
CCDC117-204	ENST00000444523	PARP3	Q9Y6F1	533 aa		32.76	■■■□□ 2.83
CCDC117-204	ENST00000444523	U2SURP	O15042	1029 aa	Known RBP	32.75	■■■□□ 2.83
CCDC117-204	ENST00000444523	IL17RE	Q8NFR9	667 aa		32.75	■■■□□ 2.83
CCDC117-204	ENST00000444523	KCNA3	P22001	575 aa		32.74	■■■□□ 2.83
CCDC117-204	ENST00000444523	TM4SF1	P30408	202 aa		32.72	■■■□□ 2.83
CCDC117-204	ENST00000444523	ZBTB1	Q9Y2K1	713 aa		32.72	■■■□□ 2.83
CCDC117-204	ENST00000444523	SENP3-EIF4A1	A0A087X0R7	540 aa		32.71	■■■□□ 2.83
CCDC117-204	ENST00000444523	USPL1	Q5W0Q7	1092 aa		32.7	■■■□□ 2.83
CCDC117-204	ENST00000444523	PHACTR3	Q96KR7	559 aa		32.7	■■■□□ 2.83
CCDC117-204	ENST00000444523	BCS1L	Q9Y276	419 aa		32.7	■■■□□ 2.83
CCDC117-204	ENST00000444523	AFDN	P55196	1824 aa	Known RBP	32.7	■■■□□ 2.82
CCDC117-204	ENST00000444523	POLRMT	O00411	1230 aa	Known RBP	32.69	■■■□□ 2.82
CCDC117-204	ENST00000444523	VSIG10	Q8N0Z9	540 aa		32.69	■■■□□ 2.82
CCDC117-204	ENST00000444523	ARFGEF1	Q9Y6D6	1849 aa		32.69	■■■□□ 2.82
CCDC117-204	ENST00000444523	BCL2L12	Q9HB09	334 aa		32.68	■■■□□ 2.82

Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms