RNA–Protein interactions for RNA: ENST00000444131.2

TMED4-202, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 4

Gene TMED4, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-202ENST00000444131 LINC00116Q8NCU8 138 aa25.52■■□□□ 1.68
TMED4-202ENST00000444131 ZNF831Q5JPB2 1677 aa25.51■■□□□ 1.67
TMED4-202ENST00000444131 PHF14O94880 888 aa25.5■■□□□ 1.67
TMED4-202ENST00000444131 ATG3Q9NT62 314 aa25.5■■□□□ 1.67
TMED4-202ENST00000444131 ITPK1Q13572 414 aa25.48■■□□□ 1.67
TMED4-202ENST00000444131 AMIGO3Q86WK7 504 aa25.48■■□□□ 1.67
TMED4-202ENST00000444131 GNPATO15228 680 aa25.47■■□□□ 1.67
TMED4-202ENST00000444131 YBX3P16989 372 aaKnown RBP eCLIP25.47■■□□□ 1.67
TMED4-202ENST00000444131 KDRP35968 1356 aa25.46■■□□□ 1.67
TMED4-202ENST00000444131 ZNF530Q6P9A1 599 aaPredicted RBP25.46■■□□□ 1.67
TMED4-202ENST00000444131 CABP4P57796 275 aa25.44■■□□□ 1.66
TMED4-202ENST00000444131 C1orf141Q5JVX7 400 aa25.44■■□□□ 1.66
TMED4-202ENST00000444131 RC3H1Q5TC82 1133 aaKnown RBP25.43■■□□□ 1.66
TMED4-202ENST00000444131 RTCBQ9Y3I0 505 aaKnown RBP25.43■■□□□ 1.66
TMED4-202ENST00000444131 MTHFSP49914 203 aa25.42■■□□□ 1.66
TMED4-202ENST00000444131 RBM42Q9BTD8 480 aaKnown RBP25.42■■□□□ 1.66
TMED4-202ENST00000444131 KDM6AO15550 1401 aaPredicted RBP25.42■■□□□ 1.66
TMED4-202ENST00000444131 ADRA2BP18089 450 aa25.41■■□□□ 1.66
TMED4-202ENST00000444131 C1QTNF8P60827 252 aa25.41■■□□□ 1.66
TMED4-202ENST00000444131 SULT6B1Q6IMI4 303 aa25.41■■□□□ 1.66
TMED4-202ENST00000444131 AMER1Q5JTC6 1135 aaPredicted RBP25.4■■□□□ 1.66
TMED4-202ENST00000444131 TRAPPC3LQ5T215 181 aa25.4■■□□□ 1.66
TMED4-202ENST00000444131 AEBP1Q8IUX7 1158 aa25.4■■□□□ 1.66
TMED4-202ENST00000444131 COL5A3P25940 1745 aaPredicted RBP25.4■■□□□ 1.66
TMED4-202ENST00000444131 CNTNAP4Q9C0A0 1308 aa25.39■■□□□ 1.66
TMED4-202ENST00000444131 IL13P35225 146 aa25.39■■□□□ 1.66
TMED4-202ENST00000444131 SMIM5Q71RC9 77 aa25.39■■□□□ 1.66
TMED4-202ENST00000444131 GIGYF1O75420 1035 aaPredicted RBP25.38■■□□□ 1.65
TMED4-202ENST00000444131 NLGN1Q8N2Q7 840 aa25.38■■□□□ 1.65
TMED4-202ENST00000444131 SLC4A9Q96Q91 983 aa25.38■■□□□ 1.65
TMED4-202ENST00000444131 KIF7Q2M1P5 1343 aa25.37■■□□□ 1.65
TMED4-202ENST00000444131 RPS6KA4O75676 772 aa25.36■■□□□ 1.65
TMED4-202ENST00000444131 SCN11AQ9UI33 1791 aa25.35■■□□□ 1.65
TMED4-202ENST00000444131 MMP10P09238 476 aa25.34■■□□□ 1.65
TMED4-202ENST00000444131 NFATC2IPQ8NCF5 419 aa25.34■■□□□ 1.65
TMED4-202ENST00000444131 KIF13BQ9NQT8 1826 aa25.33■■□□□ 1.65
TMED4-202ENST00000444131 RFC4P35249 363 aa25.33■■□□□ 1.65
TMED4-202ENST00000444131 AKAP4Q5JQC9 854 aa25.33■■□□□ 1.65
TMED4-202ENST00000444131 CICQ96RK0 1608 aaPredicted RBP25.33■■□□□ 1.65
TMED4-202ENST00000444131 ARHGEF1Q92888 912 aaKnown RBP25.32■■□□□ 1.64
TMED4-202ENST00000444131 MYH14Q7Z406 1995 aaKnown RBP25.31■■□□□ 1.64
TMED4-202ENST00000444131 PTCD1O75127 700 aaKnown RBP25.31■■□□□ 1.64
TMED4-202ENST00000444131 PER1O15534 1290 aaPredicted RBP25.3■■□□□ 1.64
TMED4-202ENST00000444131 TGFB2P61812 414 aa25.3■■□□□ 1.64
TMED4-202ENST00000444131 ATP10DQ9P241 1426 aa25.29■■□□□ 1.64
TMED4-202ENST00000444131 SENP3-EIF4A1A0A087X0R7 540 aa25.29■■□□□ 1.64
TMED4-202ENST00000444131 CCDC87Q9NVE4 849 aa25.29■■□□□ 1.64
TMED4-202ENST00000444131 GYS1P13807 737 aa25.28■■□□□ 1.64
TMED4-202ENST00000444131 C4AP0C0L4 1744 aa25.28■■□□□ 1.64
TMED4-202ENST00000444131 DIAPH1O60610 1272 aaKnown RBP25.27■■□□□ 1.64
TMED4-202ENST00000444131 CRKLP46109 303 aaKnown RBP25.27■■□□□ 1.64
TMED4-202ENST00000444131 SLC52A2Q9HAB3 445 aa25.27■■□□□ 1.64
TMED4-202ENST00000444131 PARP3Q9Y6F1 533 aa25.27■■□□□ 1.64
TMED4-202ENST00000444131 ADCY9O60503 1353 aa25.27■■□□□ 1.64
TMED4-202ENST00000444131 NPC1L1Q9UHC9 1359 aa25.27■■□□□ 1.64
TMED4-202ENST00000444131 TJP1Q07157 1748 aa25.26■■□□□ 1.63
TMED4-202ENST00000444131 C10orf71Q711Q0 1435 aa25.26■■□□□ 1.63
TMED4-202ENST00000444131 GPBP1L1Q9HC44 474 aaPredicted RBP25.25■■□□□ 1.63
TMED4-202ENST00000444131 PXDNLA1KZ92 1463 aa25.25■■□□□ 1.63
TMED4-202ENST00000444131 VIRMAQ69YN4 1812 aaKnown RBP25.24■■□□□ 1.63
TMED4-202ENST00000444131 MRC1P22897 1456 aa25.24■■□□□ 1.63
TMED4-202ENST00000444131 CC2D1BQ5T0F9 858 aaKnown RBP25.24■■□□□ 1.63
TMED4-202ENST00000444131 KIAA1551Q9HCM1 1747 aa25.23■■□□□ 1.63
TMED4-202ENST00000444131 HMOX1P09601 288 aa25.23■■□□□ 1.63
TMED4-202ENST00000444131 RNMTO43148 476 aaKnown RBP25.22■■□□□ 1.63
TMED4-202ENST00000444131 N4BP2Q86UW6 1770 aaPredicted RBP25.21■■□□□ 1.63
TMED4-202ENST00000444131 USP42Q9H9J4 1324 aaKnown RBP25.21■■□□□ 1.63
TMED4-202ENST00000444131 WWC3Q9ULE0 1092 aa25.21■■□□□ 1.63
TMED4-202ENST00000444131 ADAMTS7Q9UKP4 1686 aa25.2■■□□□ 1.63
TMED4-202ENST00000444131 LGR6Q9HBX8 967 aa25.2■■□□□ 1.62
TMED4-202ENST00000444131 MTHFSDQ2M296 383 aaKnown RBP25.19■■□□□ 1.62
TMED4-202ENST00000444131 A0A0G2JLW4 131 aa25.18■■□□□ 1.62
TMED4-202ENST00000444131 INTS5Q6P9B9 1019 aaKnown RBP25.18■■□□□ 1.62
TMED4-202ENST00000444131 VSIG10Q8N0Z9 540 aa25.18■■□□□ 1.62
TMED4-202ENST00000444131 BCS1LQ9Y276 419 aa25.17■■□□□ 1.62
TMED4-202ENST00000444131 BRCA1P38398 1863 aaKnown RBP25.17■■□□□ 1.62
TMED4-202ENST00000444131 DNAJC10Q8IXB1 793 aa25.16■■□□□ 1.62
TMED4-202ENST00000444131 ZPR1O75312 459 aa25.15■■□□□ 1.62
TMED4-202ENST00000444131 DPEP1P16444 411 aa25.15■■□□□ 1.62
TMED4-202ENST00000444131 FKBP8Q14318 412 aa25.15■■□□□ 1.62
TMED4-202ENST00000444131 SRP68Q9UHB9 627 aaKnown RBP25.15■■□□□ 1.62
TMED4-202ENST00000444131 KCPQ6ZWJ8 1503 aa25.14■■□□□ 1.62
TMED4-202ENST00000444131 CYP19A1P11511 503 aaPredicted RBP25.14■■□□□ 1.62
TMED4-202ENST00000444131 COL3A1P02461 1466 aaPredicted RBP25.14■■□□□ 1.61
TMED4-202ENST00000444131 SOS1Q07889 1333 aaPredicted RBP25.13■■□□□ 1.61
TMED4-202ENST00000444131 FCHSD2O94868 740 aa25.13■■□□□ 1.61
TMED4-202ENST00000444131 SLC39A6Q13433 755 aa25.13■■□□□ 1.61
TMED4-202ENST00000444131 GAS2L2Q8NHY3 880 aa25.13■■□□□ 1.61
TMED4-202ENST00000444131 PIM2Q9P1W9 311 aa25.13■■□□□ 1.61
TMED4-202ENST00000444131 ARFGEF1Q9Y6D6 1849 aa25.13■■□□□ 1.61
TMED4-202ENST00000444131 ZNF526Q8TF50 670 aaPredicted RBP25.12■■□□□ 1.61
TMED4-202ENST00000444131 UBR2Q8IWV8 1755 aa25.12■■□□□ 1.61
TMED4-202ENST00000444131 U2SURPO15042 1029 aaKnown RBP25.11■■□□□ 1.61
TMED4-202ENST00000444131 TM4SF1P30408 202 aa25.11■■□□□ 1.61
TMED4-202ENST00000444131 TTC5Q8N0Z6 440 aa25.11■■□□□ 1.61
TMED4-202ENST00000444131 COL15A1P39059 1388 aa25.1■■□□□ 1.61
TMED4-202ENST00000444131 DDR1Q08345 913 aa25.1■■□□□ 1.61
TMED4-202ENST00000444131 ARHGAP27Q6ZUM4 889 aa25.1■■□□□ 1.61
TMED4-202ENST00000444131 NARFQ9UHQ1 456 aa25.1■■□□□ 1.61
TMED4-202ENST00000444131 GNAT3A8MTJ3 354 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms