RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 MSL1Q68DK7 614 aa22.22■■□□□ 1.15
CTDSP1-204ENST00000443891 ZNF530Q6P9A1 599 aaPredicted RBP22.22■■□□□ 1.15
CTDSP1-204ENST00000443891 C1orf141Q5JVX7 400 aa22.21■■□□□ 1.15
CTDSP1-204ENST00000443891 ZNF831Q5JPB2 1677 aa22.2■■□□□ 1.15
CTDSP1-204ENST00000443891 IL13P35225 146 aa22.2■■□□□ 1.14
CTDSP1-204ENST00000443891 ITPK1Q13572 414 aa22.2■■□□□ 1.14
CTDSP1-204ENST00000443891 RC3H1Q5TC82 1133 aaKnown RBP22.2■■□□□ 1.14
CTDSP1-204ENST00000443891 GNPATO15228 680 aa22.19■■□□□ 1.14
CTDSP1-204ENST00000443891 PHF14O94880 888 aa22.19■■□□□ 1.14
CTDSP1-204ENST00000443891 MTHFSP49914 203 aa22.19■■□□□ 1.14
CTDSP1-204ENST00000443891 CABP4P57796 275 aa22.19■■□□□ 1.14
CTDSP1-204ENST00000443891 SULT6B1Q6IMI4 303 aa22.19■■□□□ 1.14
CTDSP1-204ENST00000443891 UBR3Q6ZT12 1888 aa22.19■■□□□ 1.14
CTDSP1-204ENST00000443891 ADRA2BP18089 450 aa22.18■■□□□ 1.14
CTDSP1-204ENST00000443891 PELP1Q8IZL8 1130 aaKnown RBP22.18■■□□□ 1.14
CTDSP1-204ENST00000443891 UTRNP46939 3433 aa22.18■■□□□ 1.14
CTDSP1-204ENST00000443891 PER1O15534 1290 aaPredicted RBP22.17■■□□□ 1.14
CTDSP1-204ENST00000443891 AMIGO3Q86WK7 504 aa22.17■■□□□ 1.14
CTDSP1-204ENST00000443891 RTCBQ9Y3I0 505 aaKnown RBP22.17■■□□□ 1.14
CTDSP1-204ENST00000443891 KDM6AO15550 1401 aaPredicted RBP22.16■■□□□ 1.14
CTDSP1-204ENST00000443891 AEBP1Q8IUX7 1158 aa22.16■■□□□ 1.14
CTDSP1-204ENST00000443891 NPC1L1Q9UHC9 1359 aa22.15■■□□□ 1.14
CTDSP1-204ENST00000443891 CNTNAP4Q9C0A0 1308 aa22.15■■□□□ 1.14
CTDSP1-204ENST00000443891 TRAPPC3LQ5T215 181 aa22.15■■□□□ 1.14
CTDSP1-204ENST00000443891 RBM42Q9BTD8 480 aaKnown RBP22.15■■□□□ 1.14
CTDSP1-204ENST00000443891 AKAP4Q5JQC9 854 aa22.14■■□□□ 1.13
CTDSP1-204ENST00000443891 YBX3P16989 372 aaKnown RBP eCLIP22.13■■□□□ 1.131e-6■□□□□ 10.2
CTDSP1-204ENST00000443891 NLGN1Q8N2Q7 840 aa22.13■■□□□ 1.13
CTDSP1-204ENST00000443891 SLC4A9Q96Q91 983 aa22.13■■□□□ 1.13
CTDSP1-204ENST00000443891 RPS6KA4O75676 772 aa22.12■■□□□ 1.13
CTDSP1-204ENST00000443891 NFATC2IPQ8NCF5 419 aa22.11■■□□□ 1.13
CTDSP1-204ENST00000443891 DIAPH1O60610 1272 aaKnown RBP22.1■■□□□ 1.13
CTDSP1-204ENST00000443891 SMIM5Q71RC9 77 aa22.08■■□□□ 1.13
CTDSP1-204ENST00000443891 ARHGEF1Q92888 912 aaKnown RBP22.08■■□□□ 1.13
CTDSP1-204ENST00000443891 MMP10P09238 476 aa22.07■■□□□ 1.12
CTDSP1-204ENST00000443891 RFC4P35249 363 aa22.07■■□□□ 1.12
CTDSP1-204ENST00000443891 SLC52A2Q9HAB3 445 aa22.07■■□□□ 1.12
CTDSP1-204ENST00000443891 TGFB2P61812 414 aa22.06■■□□□ 1.12
CTDSP1-204ENST00000443891 PTCD1O75127 700 aaKnown RBP22.05■■□□□ 1.12
CTDSP1-204ENST00000443891 CC2D1BQ5T0F9 858 aaKnown RBP22.05■■□□□ 1.12
CTDSP1-204ENST00000443891 COL5A3P25940 1745 aaPredicted RBP22.05■■□□□ 1.12
CTDSP1-204ENST00000443891 CICQ96RK0 1608 aaPredicted RBP22.05■■□□□ 1.12
CTDSP1-204ENST00000443891 GYS1P13807 737 aa22.04■■□□□ 1.12
CTDSP1-204ENST00000443891 C1QTNF8P60827 252 aa22.04■■□□□ 1.12
CTDSP1-204ENST00000443891 RNMTO43148 476 aaKnown RBP22.03■■□□□ 1.12
CTDSP1-204ENST00000443891 CRKLP46109 303 aaKnown RBP22.03■■□□□ 1.12
CTDSP1-204ENST00000443891 CCDC87Q9NVE4 849 aa22.03■■□□□ 1.12
CTDSP1-204ENST00000443891 MRC1P22897 1456 aa22.03■■□□□ 1.12
CTDSP1-204ENST00000443891 SCN11AQ9UI33 1791 aa22.02■■□□□ 1.12
CTDSP1-204ENST00000443891 GIGYF1O75420 1035 aaPredicted RBP22.02■■□□□ 1.12
CTDSP1-204ENST00000443891 HMOX1P09601 288 aa22.02■■□□□ 1.12
CTDSP1-204ENST00000443891 PARP3Q9Y6F1 533 aa22.01■■□□□ 1.11
CTDSP1-204ENST00000443891 MTHFSDQ2M296 383 aaKnown RBP22■■□□□ 1.11
CTDSP1-204ENST00000443891 VSIG10Q8N0Z9 540 aa22■■□□□ 1.11
CTDSP1-204ENST00000443891 LGR6Q9HBX8 967 aa22■■□□□ 1.11
CTDSP1-204ENST00000443891 GOLGB1Q14789 3259 aaKnown RBP22■■□□□ 1.11
CTDSP1-204ENST00000443891 C10orf71Q711Q0 1435 aa21.99■■□□□ 1.11
CTDSP1-204ENST00000443891 GAS2L2Q8NHY3 880 aa21.98■■□□□ 1.11
CTDSP1-204ENST00000443891 USP42Q9H9J4 1324 aaKnown RBP21.98■■□□□ 1.11
CTDSP1-204ENST00000443891 KIF13BQ9NQT8 1826 aa21.97■■□□□ 1.11
CTDSP1-204ENST00000443891 INTS5Q6P9B9 1019 aaKnown RBP21.97■■□□□ 1.11
CTDSP1-204ENST00000443891 ADAMTS7Q9UKP4 1686 aa21.97■■□□□ 1.11
CTDSP1-204ENST00000443891 ADCY9O60503 1353 aa21.97■■□□□ 1.11
CTDSP1-204ENST00000443891 PXDNLA1KZ92 1463 aa21.96■■□□□ 1.11
CTDSP1-204ENST00000443891 COL3A1P02461 1466 aaPredicted RBP21.96■■□□□ 1.11
CTDSP1-204ENST00000443891 ATP10DQ9P241 1426 aa21.96■■□□□ 1.11
CTDSP1-204ENST00000443891 MYH14Q7Z406 1995 aaKnown RBP21.96■■□□□ 1.11
CTDSP1-204ENST00000443891 DNAJC10Q8IXB1 793 aa21.95■■□□□ 1.1
CTDSP1-204ENST00000443891 CFAP53Q96M91 514 aa21.95■■□□□ 1.1
CTDSP1-204ENST00000443891 C4AP0C0L4 1744 aa21.94■■□□□ 1.1
CTDSP1-204ENST00000443891 TJP1Q07157 1748 aa21.94■■□□□ 1.1
CTDSP1-204ENST00000443891 U2SURPO15042 1029 aaKnown RBP21.94■■□□□ 1.1
CTDSP1-204ENST00000443891 CYP19A1P11511 503 aaPredicted RBP21.94■■□□□ 1.1
CTDSP1-204ENST00000443891 GNAT3A8MTJ3 354 aa21.93■■□□□ 1.1
CTDSP1-204ENST00000443891 ZPR1O75312 459 aa21.93■■□□□ 1.1
CTDSP1-204ENST00000443891 SOS1Q07889 1333 aaPredicted RBP21.93■■□□□ 1.1
CTDSP1-204ENST00000443891 SLC39A6Q13433 755 aa21.92■■□□□ 1.1
CTDSP1-204ENST00000443891 TTC5Q8N0Z6 440 aa21.92■■□□□ 1.1
CTDSP1-204ENST00000443891 GPBP1L1Q9HC44 474 aaPredicted RBP21.92■■□□□ 1.1
CTDSP1-204ENST00000443891 NUDCQ9Y266 331 aa21.92■■□□□ 1.1
CTDSP1-204ENST00000443891 TM4SF1P30408 202 aa21.91■■□□□ 1.1
CTDSP1-204ENST00000443891 TEFQ10587 303 aa21.91■■□□□ 1.1
CTDSP1-204ENST00000443891 FKBP8Q14318 412 aa21.91■■□□□ 1.1
CTDSP1-204ENST00000443891 TEX13AQ9BXU3 409 aaPredicted RBP21.91■■□□□ 1.1
CTDSP1-204ENST00000443891 KCPQ6ZWJ8 1503 aa21.9■■□□□ 1.1
CTDSP1-204ENST00000443891 SENP3-EIF4A1A0A087X0R7 540 aa21.9■■□□□ 1.1
CTDSP1-204ENST00000443891 A0A0G2JLW4 131 aa21.9■■□□□ 1.1
CTDSP1-204ENST00000443891 STARD3NLO95772 234 aa21.9■■□□□ 1.1
CTDSP1-204ENST00000443891 SRP68Q9UHB9 627 aaKnown RBP21.9■■□□□ 1.1
CTDSP1-204ENST00000443891 NARFQ9UHQ1 456 aa21.9■■□□□ 1.1
CTDSP1-204ENST00000443891 BCS1LQ9Y276 419 aa21.9■■□□□ 1.1
CTDSP1-204ENST00000443891 DPEP1P16444 411 aa21.89■■□□□ 1.09
CTDSP1-204ENST00000443891 PIM2Q9P1W9 311 aa21.88■■□□□ 1.09
CTDSP1-204ENST00000443891 KIAA1551Q9HCM1 1747 aa21.88■■□□□ 1.09
CTDSP1-204ENST00000443891 COL15A1P39059 1388 aa21.87■■□□□ 1.09
CTDSP1-204ENST00000443891 A0A087WZG4 1122 aa21.87■■□□□ 1.09
CTDSP1-204ENST00000443891 POLRMTO00411 1230 aaKnown RBP21.87■■□□□ 1.09
CTDSP1-204ENST00000443891 DDR1Q08345 913 aa21.87■■□□□ 1.09
CTDSP1-204ENST00000443891 USPL1Q5W0Q7 1092 aa21.87■■□□□ 1.09
CTDSP1-204ENST00000443891 ZNF790Q6PG37 636 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms