RNA–Protein interactions for RNA: ENST00000443003.2

RPSA-202, Transcript of ribosomal protein SA, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RPSA, Length 1,032 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-202ENST00000443003 APLP1P51693 650 aa10.41□□□□□ -0.74
RPSA-202ENST00000443003 SIK1P57059 783 aa10.41□□□□□ -0.74
RPSA-202ENST00000443003 TMOD3Q9NYL9 352 aa10.41□□□□□ -0.74
RPSA-202ENST00000443003 BCS1LQ9Y276 419 aa10.41□□□□□ -0.74
RPSA-202ENST00000443003 EMILIN1Q9Y6C2 1016 aa10.41□□□□□ -0.74
RPSA-202ENST00000443003 ARFGEF1Q9Y6D6 1849 aa10.41□□□□□ -0.74
RPSA-202ENST00000443003 ITPK1Q13572 414 aa10.4□□□□□ -0.74
RPSA-202ENST00000443003 NMRK2Q9NPI5 230 aa10.39□□□□□ -0.75
RPSA-202ENST00000443003 ASAP1Q9ULH1 1129 aa10.39□□□□□ -0.75
RPSA-202ENST00000443003 SPG7Q9UQ90 795 aa10.39□□□□□ -0.75
RPSA-202ENST00000443003 C10orf71Q711Q0 1435 aa10.39□□□□□ -0.75
RPSA-202ENST00000443003 KIF24Q5T7B8 1368 aa10.39□□□□□ -0.75
RPSA-202ENST00000443003 A0A0G2JLW4 131 aa10.38□□□□□ -0.75
RPSA-202ENST00000443003 TOMM70O94826 608 aa10.38□□□□□ -0.75
RPSA-202ENST00000443003 TMF1P82094 1093 aa10.38□□□□□ -0.75
RPSA-202ENST00000443003 ARHGAP27Q6ZUM4 889 aa10.38□□□□□ -0.75
RPSA-202ENST00000443003 FCHSD2O94868 740 aa10.37□□□□□ -0.75
RPSA-202ENST00000443003 HTRA3P83110 453 aa10.37□□□□□ -0.75
RPSA-202ENST00000443003 NCAPD2Q15021 1401 aa10.37□□□□□ -0.75
RPSA-202ENST00000443003 C16orf71Q8IYS4 520 aaPredicted RBP10.37□□□□□ -0.75
RPSA-202ENST00000443003 MYH14Q7Z406 1995 aaKnown RBP10.37□□□□□ -0.75
RPSA-202ENST00000443003 TNRC6CQ9HCJ0 1690 aaKnown RBP10.37□□□□□ -0.75
RPSA-202ENST00000443003 SLC24A1O60721 1099 aa10.36□□□□□ -0.75
RPSA-202ENST00000443003 CAPN15O75808 1086 aa10.36□□□□□ -0.75
RPSA-202ENST00000443003 DPEP1P16444 411 aa10.36□□□□□ -0.75
RPSA-202ENST00000443003 NKX1-1Q15270 411 aaPredicted RBP10.36□□□□□ -0.75
RPSA-202ENST00000443003 TRAPPC3LQ5T215 181 aa10.36□□□□□ -0.75
RPSA-202ENST00000443003 RBM42Q9BTD8 480 aaKnown RBP10.36□□□□□ -0.75
RPSA-202ENST00000443003 CCDC87Q9NVE4 849 aa10.36□□□□□ -0.75
RPSA-202ENST00000443003 RTCBQ9Y3I0 505 aaKnown RBP10.36□□□□□ -0.75
RPSA-202ENST00000443003 ZNF831Q5JPB2 1677 aa10.36□□□□□ -0.75
RPSA-202ENST00000443003 KCPQ6ZWJ8 1503 aa10.36□□□□□ -0.75
RPSA-202ENST00000443003 KDRP35968 1356 aa10.36□□□□□ -0.75
RPSA-202ENST00000443003 SBF1O95248 1867 aa10.36□□□□□ -0.75
RPSA-202ENST00000443003 PHKG2P15735 406 aa10.35□□□□□ -0.75
RPSA-202ENST00000443003 ZEB1P37275 1124 aaPredicted RBP10.35□□□□□ -0.75
RPSA-202ENST00000443003 TGFB2P61812 414 aa10.35□□□□□ -0.75
RPSA-202ENST00000443003 IFNL2Q8IZJ0 200 aa10.35□□□□□ -0.75
RPSA-202ENST00000443003 ATG3Q9NT62 314 aa10.35□□□□□ -0.75
RPSA-202ENST00000443003 PLEKHG2Q9H7P9 1386 aa10.35□□□□□ -0.75
RPSA-202ENST00000443003 C9orf131Q5VYM1 1079 aa10.34□□□□□ -0.75
RPSA-202ENST00000443003 NLGN1Q8N2Q7 840 aa10.34□□□□□ -0.75
RPSA-202ENST00000443003 EYA1Q99502 592 aa10.34□□□□□ -0.75
RPSA-202ENST00000443003 PARP3Q9Y6F1 533 aa10.34□□□□□ -0.75
RPSA-202ENST00000443003 CCDC88AQ3V6T2 1871 aa10.34□□□□□ -0.75
RPSA-202ENST00000443003 TJP1Q07157 1748 aa10.33□□□□□ -0.76
RPSA-202ENST00000443003 TIAM2Q8IVF5 1701 aa10.33□□□□□ -0.76
RPSA-202ENST00000443003 RFC4P35249 363 aa10.33□□□□□ -0.76
RPSA-202ENST00000443003 DNAJC5GQ8N7S2 189 aa10.33□□□□□ -0.76
RPSA-202ENST00000443003 ARHGEF1Q92888 912 aaKnown RBP10.33□□□□□ -0.76
RPSA-202ENST00000443003 CARD14Q9BXL6 1004 aa10.33□□□□□ -0.76
RPSA-202ENST00000443003 VIRMAQ69YN4 1812 aaKnown RBP10.33□□□□□ -0.76
RPSA-202ENST00000443003 GYS1P13807 737 aa10.32□□□□□ -0.76
RPSA-202ENST00000443003 TNNT2P45379 298 aaPredicted RBP10.32□□□□□ -0.76
RPSA-202ENST00000443003 CDCA8Q53HL2 280 aa10.32□□□□□ -0.76
RPSA-202ENST00000443003 COL13A1Q5TAT6 717 aaPredicted RBP10.32□□□□□ -0.76
RPSA-202ENST00000443003 RBM46Q8TBY0 533 aaKnown RBP10.32□□□□□ -0.76
RPSA-202ENST00000443003 SLC4A9Q96Q91 983 aa10.32□□□□□ -0.76
RPSA-202ENST00000443003 RNF181Q9P0P0 153 aa10.32□□□□□ -0.76
RPSA-202ENST00000443003 WASHC2AQ641Q2 1341 aa10.32□□□□□ -0.76
RPSA-202ENST00000443003 CNTNAP4Q9C0A0 1308 aa10.32□□□□□ -0.76
RPSA-202ENST00000443003 AFDNP55196 1824 aaKnown RBP10.31□□□□□ -0.76
RPSA-202ENST00000443003 KLRG1Q96E93 195 aa10.31□□□□□ -0.76
RPSA-202ENST00000443003 POLR3GLQ9BT43 218 aa10.31□□□□□ -0.76
RPSA-202ENST00000443003 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.31□□□□□ -0.76
RPSA-202ENST00000443003 KDM6AO15550 1401 aaPredicted RBP10.31□□□□□ -0.76
RPSA-202ENST00000443003 KDM2BQ8NHM5 1336 aa10.31□□□□□ -0.76
RPSA-202ENST00000443003 DLEC1Q9Y238 1755 aa10.3□□□□□ -0.76
RPSA-202ENST00000443003 EIF4A2Q14240 407 aaKnown RBP10.3□□□□□ -0.76
RPSA-202ENST00000443003 DALRD3Q5D0E6 543 aaKnown RBP10.3□□□□□ -0.76
RPSA-202ENST00000443003 RRAGCQ9HB90 399 aa10.3□□□□□ -0.76
RPSA-202ENST00000443003 PIM2Q9P1W9 311 aa10.3□□□□□ -0.76
RPSA-202ENST00000443003 SRP68Q9UHB9 627 aaKnown RBP10.3□□□□□ -0.76
RPSA-202ENST00000443003 SCN11AQ9UI33 1791 aa10.29□□□□□ -0.76
RPSA-202ENST00000443003 PTCD1O75127 700 aaKnown RBP10.29□□□□□ -0.76
RPSA-202ENST00000443003 RPS6KA4O75676 772 aa10.29□□□□□ -0.76
RPSA-202ENST00000443003 CHRNA5P30532 468 aa10.29□□□□□ -0.76
RPSA-202ENST00000443003 CABP4P57796 275 aa10.29□□□□□ -0.76
RPSA-202ENST00000443003 EIF4G2P78344 907 aaKnown RBP eCLIP10.29□□□□□ -0.76
RPSA-202ENST00000443003 CACNA1SQ13698 1873 aa10.28□□□□□ -0.76
RPSA-202ENST00000443003 KCNA3P22001 575 aa10.28□□□□□ -0.76
RPSA-202ENST00000443003 KCNA4P22459 653 aa10.28□□□□□ -0.76
RPSA-202ENST00000443003 RASSF7Q02833 373 aa10.28□□□□□ -0.76
RPSA-202ENST00000443003 DDR1Q08345 913 aa10.28□□□□□ -0.76
RPSA-202ENST00000443003 FSTL1Q12841 308 aa10.28□□□□□ -0.76
RPSA-202ENST00000443003 FKBP8Q14318 412 aa10.28□□□□□ -0.76
RPSA-202ENST00000443003 RC3H1Q5TC82 1133 aaKnown RBP10.28□□□□□ -0.76
RPSA-202ENST00000443003 ZNF530Q6P9A1 599 aaPredicted RBP10.28□□□□□ -0.76
RPSA-202ENST00000443003 TNS4Q8IZW8 715 aa10.28□□□□□ -0.76
RPSA-202ENST00000443003 DCAF5Q96JK2 942 aa10.28□□□□□ -0.76
RPSA-202ENST00000443003 POLKQ9UBT6 870 aa10.28□□□□□ -0.76
RPSA-202ENST00000443003 ADAMTS7Q9UKP4 1686 aa10.28□□□□□ -0.76
RPSA-202ENST00000443003 ERVV-2B6SEH9 535 aa10.27□□□□□ -0.77
RPSA-202ENST00000443003 HSP90AB1P08238 724 aaKnown RBP10.27□□□□□ -0.77
RPSA-202ENST00000443003 CRKLP46109 303 aaKnown RBP10.27□□□□□ -0.77
RPSA-202ENST00000443003 JMYQ8N9B5 988 aa10.27□□□□□ -0.77
RPSA-202ENST00000443003 SMC1BQ8NDV3 1235 aa10.27□□□□□ -0.77
RPSA-202ENST00000443003 USP42Q9H9J4 1324 aaKnown RBP10.27□□□□□ -0.77
RPSA-202ENST00000443003 PLEKHO1Q53GL0 409 aaPredicted RBP10.26□□□□□ -0.77
RPSA-202ENST00000443003 C1orf141Q5JVX7 400 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms