RNA–Protein interactions for RNA: ENST00000442714.5

HDLBP-219, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-219ENST00000442714 ARHGEF1Q92888 912 aaKnown RBP13.91□□□□□ -0.18
HDLBP-219ENST00000442714 KNSTRNQ9Y448 316 aa13.91□□□□□ -0.18
HDLBP-219ENST00000442714 MTHFSP49914 203 aa13.9□□□□□ -0.18
HDLBP-219ENST00000442714 CABP4P57796 275 aa13.9□□□□□ -0.18
HDLBP-219ENST00000442714 ZNF530Q6P9A1 599 aaPredicted RBP13.9□□□□□ -0.18
HDLBP-219ENST00000442714 NLGN1Q8N2Q7 840 aa13.9□□□□□ -0.18
HDLBP-219ENST00000442714 NFATC2IPQ8NCF5 419 aa13.9□□□□□ -0.18
HDLBP-219ENST00000442714 CCER1Q8TC90 406 aaPredicted RBP13.9□□□□□ -0.18
HDLBP-219ENST00000442714 RBM42Q9BTD8 480 aaKnown RBP13.9□□□□□ -0.18
HDLBP-219ENST00000442714 RTCBQ9Y3I0 505 aaKnown RBP13.9□□□□□ -0.18
HDLBP-219ENST00000442714 GIGYF1O75420 1035 aaPredicted RBP13.89□□□□□ -0.19
HDLBP-219ENST00000442714 RPS6KA4O75676 772 aa13.89□□□□□ -0.19
HDLBP-219ENST00000442714 MMP10P09238 476 aa13.89□□□□□ -0.19
HDLBP-219ENST00000442714 AMER1Q5JTC6 1135 aaPredicted RBP13.89□□□□□ -0.19
HDLBP-219ENST00000442714 SULT6B1Q6IMI4 303 aa13.89□□□□□ -0.19
HDLBP-219ENST00000442714 SENP3-EIF4A1A0A087X0R7 540 aa13.88□□□□□ -0.19
HDLBP-219ENST00000442714 PER1O15534 1290 aaPredicted RBP13.88□□□□□ -0.19
HDLBP-219ENST00000442714 ADRA2BP18089 450 aa13.88□□□□□ -0.19
HDLBP-219ENST00000442714 TGFB2P61812 414 aa13.87□□□□□ -0.19
HDLBP-219ENST00000442714 KIF20BQ96Q89 1820 aa13.86□□□□□ -0.19
HDLBP-219ENST00000442714 PTCD1O75127 700 aaKnown RBP13.86□□□□□ -0.19
HDLBP-219ENST00000442714 GYS1P13807 737 aa13.86□□□□□ -0.19
HDLBP-219ENST00000442714 C1orf141Q5JVX7 400 aa13.86□□□□□ -0.19
HDLBP-219ENST00000442714 TUBGCP6Q96RT7 1819 aa13.85□□□□□ -0.19
HDLBP-219ENST00000442714 KDRP35968 1356 aa13.85□□□□□ -0.19
HDLBP-219ENST00000442714 C4BP0C0L5 1744 aa13.85□□□□□ -0.19
HDLBP-219ENST00000442714 PKD1L3Q7Z443 1732 aa13.85□□□□□ -0.19
HDLBP-219ENST00000442714 A0A0G2JLW4 131 aa13.85□□□□□ -0.19
HDLBP-219ENST00000442714 RFC4P35249 363 aa13.85□□□□□ -0.19
HDLBP-219ENST00000442714 LGR6Q9HBX8 967 aa13.85□□□□□ -0.19
HDLBP-219ENST00000442714 WWC3Q9ULE0 1092 aa13.85□□□□□ -0.19
HDLBP-219ENST00000442714 CNTNAP4Q9C0A0 1308 aa13.85□□□□□ -0.19
HDLBP-219ENST00000442714 TOGARAM1Q9Y4F4 1720 aa13.84□□□□□ -0.19
HDLBP-219ENST00000442714 CHD4Q14839 1912 aa13.84□□□□□ -0.19
HDLBP-219ENST00000442714 MAP2P11137 1827 aaKnown RBP13.84□□□□□ -0.19
HDLBP-219ENST00000442714 KDM6AO15550 1401 aaPredicted RBP13.83□□□□□ -0.2
HDLBP-219ENST00000442714 C5P01031 1676 aa13.83□□□□□ -0.2
HDLBP-219ENST00000442714 AKAP4Q5JQC9 854 aa13.83□□□□□ -0.2
HDLBP-219ENST00000442714 INTS5Q6P9B9 1019 aaKnown RBP13.83□□□□□ -0.2
HDLBP-219ENST00000442714 GPBP1L1Q9HC44 474 aaPredicted RBP13.83□□□□□ -0.2
HDLBP-219ENST00000442714 KIF7Q2M1P5 1343 aa13.83□□□□□ -0.2
HDLBP-219ENST00000442714 ATP10DQ9P241 1426 aa13.82□□□□□ -0.2
HDLBP-219ENST00000442714 KCNA3P22001 575 aa13.82□□□□□ -0.2
HDLBP-219ENST00000442714 CRKLP46109 303 aaKnown RBP13.82□□□□□ -0.2
HDLBP-219ENST00000442714 ITGB4P16144 1822 aa13.82□□□□□ -0.2
HDLBP-219ENST00000442714 ANKRD26Q9UPS8 1709 aa13.81□□□□□ -0.2
HDLBP-219ENST00000442714 CEP350Q5VT06 3117 aa13.81□□□□□ -0.2
HDLBP-219ENST00000442714 DPEP1P16444 411 aa13.81□□□□□ -0.2
HDLBP-219ENST00000442714 SLC52A2Q9HAB3 445 aa13.81□□□□□ -0.2
HDLBP-219ENST00000442714 PARP3Q9Y6F1 533 aa13.81□□□□□ -0.2
HDLBP-219ENST00000442714 ADCY9O60503 1353 aa13.81□□□□□ -0.2
HDLBP-219ENST00000442714 TAF1LQ8IZX4 1826 aa13.8□□□□□ -0.2
HDLBP-219ENST00000442714 RNMTO43148 476 aaKnown RBP13.8□□□□□ -0.2
HDLBP-219ENST00000442714 TM4SF1P30408 202 aa13.8□□□□□ -0.2
HDLBP-219ENST00000442714 FKBP8Q14318 412 aa13.8□□□□□ -0.2
HDLBP-219ENST00000442714 CCDC87Q9NVE4 849 aa13.8□□□□□ -0.2
HDLBP-219ENST00000442714 SRP68Q9UHB9 627 aaKnown RBP13.8□□□□□ -0.2
HDLBP-219ENST00000442714 HMOX1P09601 288 aa13.79□□□□□ -0.2
HDLBP-219ENST00000442714 MTHFSDQ2M296 383 aaKnown RBP13.79□□□□□ -0.2
HDLBP-219ENST00000442714 DNAJC10Q8IXB1 793 aa13.79□□□□□ -0.2
HDLBP-219ENST00000442714 ZNF526Q8TF50 670 aaPredicted RBP13.79□□□□□ -0.2
HDLBP-219ENST00000442714 BCS1LQ9Y276 419 aa13.79□□□□□ -0.2
HDLBP-219ENST00000442714 DIAPH1O60610 1272 aaKnown RBP13.78□□□□□ -0.2
HDLBP-219ENST00000442714 CYP19A1P11511 503 aaPredicted RBP13.78□□□□□ -0.2
HDLBP-219ENST00000442714 SLC39A6Q13433 755 aa13.78□□□□□ -0.2
HDLBP-219ENST00000442714 ARHGAP27Q6ZUM4 889 aa13.78□□□□□ -0.2
HDLBP-219ENST00000442714 UBR3Q6ZT12 1888 aa13.78□□□□□ -0.2
HDLBP-219ENST00000442714 KIF3CO14782 793 aa13.77□□□□□ -0.21
HDLBP-219ENST00000442714 DDR1Q08345 913 aa13.77□□□□□ -0.21
HDLBP-219ENST00000442714 CC2D1BQ5T0F9 858 aaKnown RBP13.77□□□□□ -0.21
HDLBP-219ENST00000442714 USP42Q9H9J4 1324 aaKnown RBP13.77□□□□□ -0.21
HDLBP-219ENST00000442714 PXDNLA1KZ92 1463 aa13.76□□□□□ -0.21
HDLBP-219ENST00000442714 FCHSD2O94868 740 aa13.76□□□□□ -0.21
HDLBP-219ENST00000442714 PIM2Q9P1W9 311 aa13.76□□□□□ -0.21
HDLBP-219ENST00000442714 POLRMTO00411 1230 aaKnown RBP13.75□□□□□ -0.21
HDLBP-219ENST00000442714 ZPR1O75312 459 aa13.75□□□□□ -0.21
HDLBP-219ENST00000442714 VSIG10Q8N0Z9 540 aa13.75□□□□□ -0.21
HDLBP-219ENST00000442714 C10orf71Q711Q0 1435 aa13.74□□□□□ -0.21
HDLBP-219ENST00000442714 HSPA6P17066 643 aa13.74□□□□□ -0.21
HDLBP-219ENST00000442714 USPL1Q5W0Q7 1092 aa13.74□□□□□ -0.21
HDLBP-219ENST00000442714 IL17REQ8NFR9 667 aa13.74□□□□□ -0.21
HDLBP-219ENST00000442714 NARFQ9UHQ1 456 aa13.74□□□□□ -0.21
HDLBP-219ENST00000442714 SOS1Q07889 1333 aaPredicted RBP13.73□□□□□ -0.21
HDLBP-219ENST00000442714 DALRD3Q5D0E6 543 aaKnown RBP13.73□□□□□ -0.21
HDLBP-219ENST00000442714 BCL2L12Q9HB09 334 aa13.73□□□□□ -0.21
HDLBP-219ENST00000442714 CHRNA5P30532 468 aa13.72□□□□□ -0.21
HDLBP-219ENST00000442714 NFIXQ14938 502 aa13.72□□□□□ -0.21
HDLBP-219ENST00000442714 ZNF831Q5JPB2 1677 aa13.72□□□□□ -0.21
HDLBP-219ENST00000442714 NPC1L1Q9UHC9 1359 aa13.71□□□□□ -0.21
HDLBP-219ENST00000442714 C9orf131Q5VYM1 1079 aa13.71□□□□□ -0.21
HDLBP-219ENST00000442714 ZBTB1Q9Y2K1 713 aa13.71□□□□□ -0.21
HDLBP-219ENST00000442714 TOMM70O94826 608 aa13.7□□□□□ -0.22
HDLBP-219ENST00000442714 STARD3NLO95772 234 aa13.7□□□□□ -0.22
HDLBP-219ENST00000442714 EIF5P55010 431 aaKnown RBP13.7□□□□□ -0.22
HDLBP-219ENST00000442714 PHACTR3Q96KR7 559 aa13.7□□□□□ -0.22
HDLBP-219ENST00000442714 MYH14Q7Z406 1995 aaKnown RBP13.7□□□□□ -0.22
HDLBP-219ENST00000442714 CICQ96RK0 1608 aaPredicted RBP13.69□□□□□ -0.22
HDLBP-219ENST00000442714 GNAT3A8MTJ3 354 aa13.69□□□□□ -0.22
HDLBP-219ENST00000442714 U2SURPO15042 1029 aaKnown RBP13.69□□□□□ -0.22
HDLBP-219ENST00000442714 SERPINB2P05120 415 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms