RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 CDCA7Q9BWT1 371 aaPredicted RBP25.9■■□□□ 1.74
VRK2-207ENST00000440705 SLC52A2Q9HAB3 445 aa25.9■■□□□ 1.74
VRK2-207ENST00000440705 KDM3BQ7LBC6 1761 aa25.9■■□□□ 1.74
VRK2-207ENST00000440705 DISP2A7MBM2 1401 aa25.89■■□□□ 1.74
VRK2-207ENST00000440705 NKX1-1Q15270 411 aaPredicted RBP25.89■■□□□ 1.73
VRK2-207ENST00000440705 SPATA31A1Q5TZJ5 1347 aa25.89■■□□□ 1.73
VRK2-207ENST00000440705 MRPL50Q8N5N7 158 aaKnown RBP25.88■■□□□ 1.73
VRK2-207ENST00000440705 C8orf37Q96NL8 207 aa25.88■■□□□ 1.73
VRK2-207ENST00000440705 UNC5CLQ8IV45 518 aa25.87■■□□□ 1.73
VRK2-207ENST00000440705 NOB1Q9ULX3 412 aaKnown RBP25.87■■□□□ 1.73
VRK2-207ENST00000440705 DDX54Q8TDD1 881 aaKnown RBP25.87■■□□□ 1.73
VRK2-207ENST00000440705 SHANK3Q9BYB0 1731 aa25.86■■□□□ 1.73
VRK2-207ENST00000440705 EIF4A1P60842 406 aaKnown RBP25.86■■□□□ 1.73
VRK2-207ENST00000440705 SPATA31A5Q5VU36 1347 aa25.86■■□□□ 1.73
VRK2-207ENST00000440705 SPATA31A7Q8IWB4 1347 aa25.86■■□□□ 1.73
VRK2-207ENST00000440705 MRC1P22897 1456 aa25.85■■□□□ 1.73
VRK2-207ENST00000440705 ATF7IPQ6VMQ6 1270 aa25.85■■□□□ 1.73
VRK2-207ENST00000440705 FNBP4Q8N3X1 1017 aaPredicted RBP25.85■■□□□ 1.73
VRK2-207ENST00000440705 ARHGAP45Q92619 1136 aa25.85■■□□□ 1.73
VRK2-207ENST00000440705 CHMP4AQ9BY43 222 aa25.85■■□□□ 1.73
VRK2-207ENST00000440705 WNK3Q9BYP7 1800 aa25.85■■□□□ 1.73
VRK2-207ENST00000440705 NFATC2IPQ8NCF5 419 aa25.84■■□□□ 1.73
VRK2-207ENST00000440705 LRP6O75581 1613 aa25.84■■□□□ 1.73
VRK2-207ENST00000440705 ERVV-2B6SEH9 535 aa25.83■■□□□ 1.73
VRK2-207ENST00000440705 EXOC5O00471 708 aa25.83■■□□□ 1.73
VRK2-207ENST00000440705 HOXB7P09629 217 aa25.83■■□□□ 1.73
VRK2-207ENST00000440705 CABP4P57796 275 aa25.83■■□□□ 1.73
VRK2-207ENST00000440705 FTSJ3Q8IY81 847 aaKnown RBP25.83■■□□□ 1.73
VRK2-207ENST00000440705 DZIP1LQ8IYY4 767 aaKnown RBP25.83■■□□□ 1.73
VRK2-207ENST00000440705 PANK1Q8TE04 598 aa25.83■■□□□ 1.73
VRK2-207ENST00000440705 CCDC9Q9Y3X0 531 aaKnown RBP25.83■■□□□ 1.73
VRK2-207ENST00000440705 TRIM27P14373 513 aa25.82■■□□□ 1.72
VRK2-207ENST00000440705 CCDC30Q5VVM6 783 aa25.82■■□□□ 1.72
VRK2-207ENST00000440705 BCL9LQ86UU0 1499 aa25.82■■□□□ 1.72
VRK2-207ENST00000440705 TCERG1O14776 1098 aaKnown RBP25.81■■□□□ 1.72
VRK2-207ENST00000440705 KCNQ3O43525 872 aa25.81■■□□□ 1.72
VRK2-207ENST00000440705 BARGINQ6ZT62 677 aa25.81■■□□□ 1.72
VRK2-207ENST00000440705 MEX3CQ5U5Q3 659 aaKnown RBP25.8■■□□□ 1.72
VRK2-207ENST00000440705 VPS72Q15906 364 aa25.8■■□□□ 1.72
VRK2-207ENST00000440705 ZNF790Q6PG37 636 aa25.8■■□□□ 1.72
VRK2-207ENST00000440705 CLUAP1Q96AJ1 413 aa25.8■■□□□ 1.72
VRK2-207ENST00000440705 CCDC136Q96JN2 1154 aa25.8■■□□□ 1.72
VRK2-207ENST00000440705 STK31Q9BXU1 1019 aa25.8■■□□□ 1.72
VRK2-207ENST00000440705 RLBP1P12271 317 aa25.78■■□□□ 1.72
VRK2-207ENST00000440705 COG6Q9Y2V7 657 aa25.78■■□□□ 1.72
VRK2-207ENST00000440705 SLC4A2P04920 1241 aa25.77■■□□□ 1.72
VRK2-207ENST00000440705 B4GALNT3Q6L9W6 998 aa25.77■■□□□ 1.72
VRK2-207ENST00000440705 USP21Q9UK80 565 aa25.77■■□□□ 1.72
VRK2-207ENST00000440705 TNNQ9UQP3 1299 aa25.77■■□□□ 1.72
VRK2-207ENST00000440705 TNS2Q63HR2 1409 aa25.77■■□□□ 1.72
VRK2-207ENST00000440705 HEG1Q9ULI3 1381 aa25.77■■□□□ 1.72
VRK2-207ENST00000440705 AAMPQ13685 434 aa25.77■■□□□ 1.72
VRK2-207ENST00000440705 API5Q9BZZ5 524 aaKnown RBP25.77■■□□□ 1.72
VRK2-207ENST00000440705 CACNA1FO60840 1977 aa25.76■■□□□ 1.71
VRK2-207ENST00000440705 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.76■■□□□ 1.71
VRK2-207ENST00000440705 MVPQ14764 893 aaKnown RBP25.75■■□□□ 1.71
VRK2-207ENST00000440705 DDB1Q16531 1140 aa25.75■■□□□ 1.71
VRK2-207ENST00000440705 HDGFL1Q5TGJ6 251 aa25.75■■□□□ 1.71
VRK2-207ENST00000440705 TTC5Q8N0Z6 440 aa25.75■■□□□ 1.71
VRK2-207ENST00000440705 PTPRCP08575 1304 aa25.75■■□□□ 1.71
VRK2-207ENST00000440705 GIGYF1O75420 1035 aaPredicted RBP25.74■■□□□ 1.71
VRK2-207ENST00000440705 SLC39A6Q13433 755 aa25.74■■□□□ 1.71
VRK2-207ENST00000440705 EIF2S2P20042 333 aaKnown RBP25.71■■□□□ 1.71
VRK2-207ENST00000440705 NECTIN2Q92692 538 aa25.71■■□□□ 1.71
VRK2-207ENST00000440705 FMNL2Q96PY5 1086 aa25.71■■□□□ 1.71
VRK2-207ENST00000440705 TMOD3Q9NYL9 352 aa25.71■■□□□ 1.71
VRK2-207ENST00000440705 DDX19BQ9UMR2 479 aa25.7■■□□□ 1.7
VRK2-207ENST00000440705 ITPRIPQ8IWB1 547 aa25.69■■□□□ 1.7
VRK2-207ENST00000440705 TMEM57Q8N5G2 664 aa25.69■■□□□ 1.7
VRK2-207ENST00000440705 TOGARAM1Q9Y4F4 1720 aa25.69■■□□□ 1.7
VRK2-207ENST00000440705 ABCC4O15439 1325 aa25.69■■□□□ 1.7
VRK2-207ENST00000440705 ZNF496Q96IT1 587 aaPredicted RBP25.68■■□□□ 1.7
VRK2-207ENST00000440705 AFF2P51816 1311 aa25.68■■□□□ 1.7
VRK2-207ENST00000440705 FAM98CQ17RN3 349 aaKnown RBP25.68■■□□□ 1.7
VRK2-207ENST00000440705 SNRPA1P09661 255 aaKnown RBP25.67■■□□□ 1.7
VRK2-207ENST00000440705 CHMP4BQ9H444 224 aaKnown RBP25.66■■□□□ 1.7
VRK2-207ENST00000440705 DBF4Q9UBU7 674 aaPredicted RBP25.66■■□□□ 1.7
VRK2-207ENST00000440705 FLIIQ13045 1269 aa25.65■■□□□ 1.7
VRK2-207ENST00000440705 G2E3Q7L622 706 aa25.65■■□□□ 1.7
VRK2-207ENST00000440705 PAPPAQ13219 1627 aa25.65■■□□□ 1.7
VRK2-207ENST00000440705 ITGB4P16144 1822 aa25.64■■□□□ 1.7
VRK2-207ENST00000440705 CHPF2Q9P2E5 772 aa25.64■■□□□ 1.69
VRK2-207ENST00000440705 PELP1Q8IZL8 1130 aaKnown RBP25.63■■□□□ 1.69
VRK2-207ENST00000440705 PIGBQ92521 554 aa25.63■■□□□ 1.69
VRK2-207ENST00000440705 TRPC5Q9UL62 973 aaPredicted RBP25.63■■□□□ 1.69
VRK2-207ENST00000440705 RGS12O14924 1447 aa25.63■■□□□ 1.69
VRK2-207ENST00000440705 UBR2Q8IWV8 1755 aa25.63■■□□□ 1.69
VRK2-207ENST00000440705 PRAMEF22A3QJZ6 481 aa25.62■■□□□ 1.69
VRK2-207ENST00000440705 MARCH10Q8NA82 808 aaPredicted RBP25.62■■□□□ 1.69
VRK2-207ENST00000440705 GJD4Q96KN9 370 aaPredicted RBP25.62■■□□□ 1.69
VRK2-207ENST00000440705 FKBP5Q13451 457 aaPredicted RBP25.61■■□□□ 1.69
VRK2-207ENST00000440705 INTS3Q68E01 1043 aaKnown RBP25.61■■□□□ 1.69
VRK2-207ENST00000440705 C5P01031 1676 aa25.6■■□□□ 1.69
VRK2-207ENST00000440705 BCL9O00512 1426 aa25.6■■□□□ 1.69
VRK2-207ENST00000440705 ATRNO75882 1429 aa25.59■■□□□ 1.69
VRK2-207ENST00000440705 DDX21Q9NR30 783 aaKnown RBP eCLIP25.59■■□□□ 1.69
VRK2-207ENST00000440705 HYPKQ9NX55 129 aa25.59■■□□□ 1.69
VRK2-207ENST00000440705 KAT6BQ8WYB5 2073 aa25.59■■□□□ 1.69
VRK2-207ENST00000440705 PHAXQ9H814 394 aaKnown RBP25.58■■□□□ 1.69
VRK2-207ENST00000440705 KCPQ6ZWJ8 1503 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms