RNA–Protein interactions for RNA: ENST00000440552.5

PTPRN-205, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-205ENST00000440552 HSPA6P17066 643 aa19.61■□□□□ 0.73
PTPRN-205ENST00000440552 KDRP35968 1356 aa19.6■□□□□ 0.73
PTPRN-205ENST00000440552 ZNF831Q5JPB2 1677 aa19.6■□□□□ 0.73
PTPRN-205ENST00000440552 MMP10P09238 476 aa19.6■□□□□ 0.73
PTPRN-205ENST00000440552 EIF4A2Q14240 407 aaKnown RBP19.6■□□□□ 0.73
PTPRN-205ENST00000440552 KIF13BQ9NQT8 1826 aa19.6■□□□□ 0.73
PTPRN-205ENST00000440552 ERVV-2B6SEH9 535 aa19.59■□□□□ 0.73
PTPRN-205ENST00000440552 ADRA2BP18089 450 aa19.58■□□□□ 0.72
PTPRN-205ENST00000440552 TGFB2P61812 414 aa19.58■□□□□ 0.72
PTPRN-205ENST00000440552 RC3H1Q5TC82 1133 aaKnown RBP19.58■□□□□ 0.72
PTPRN-205ENST00000440552 NLGN1Q8N2Q7 840 aa19.58■□□□□ 0.72
PTPRN-205ENST00000440552 ZNF526Q8TF50 670 aaPredicted RBP19.58■□□□□ 0.72
PTPRN-205ENST00000440552 PXDNLA1KZ92 1463 aa19.57■□□□□ 0.72
PTPRN-205ENST00000440552 HSP90AB1P08238 724 aaKnown RBP19.57■□□□□ 0.72
PTPRN-205ENST00000440552 TRAPPC3LQ5T215 181 aa19.57■□□□□ 0.72
PTPRN-205ENST00000440552 RTCBQ9Y3I0 505 aaKnown RBP19.57■□□□□ 0.72
PTPRN-205ENST00000440552 DCAF5Q96JK2 942 aa19.56■□□□□ 0.72
PTPRN-205ENST00000440552 WWC3Q9ULE0 1092 aa19.56■□□□□ 0.72
PTPRN-205ENST00000440552 KIAA1551Q9HCM1 1747 aa19.56■□□□□ 0.72
PTPRN-205ENST00000440552 CNTNAP4Q9C0A0 1308 aa19.55■□□□□ 0.72
PTPRN-205ENST00000440552 KIF3CO14782 793 aa19.55■□□□□ 0.72
PTPRN-205ENST00000440552 C10orf71Q711Q0 1435 aa19.55■□□□□ 0.72
PTPRN-205ENST00000440552 SLC4A9Q96Q91 983 aa19.55■□□□□ 0.72
PTPRN-205ENST00000440552 TRIM26Q12899 539 aaPredicted RBP19.53■□□□□ 0.72
PTPRN-205ENST00000440552 PLEKHO1Q53GL0 409 aaPredicted RBP19.53■□□□□ 0.72
PTPRN-205ENST00000440552 ARHGEF1Q92888 912 aaKnown RBP19.53■□□□□ 0.72
PTPRN-205ENST00000440552 COL5A3P25940 1745 aaPredicted RBP19.53■□□□□ 0.72
PTPRN-205ENST00000440552 RPS6KA4O75676 772 aa19.52■□□□□ 0.72
PTPRN-205ENST00000440552 AMOTQ4VCS5 1084 aa19.52■□□□□ 0.72
PTPRN-205ENST00000440552 CCDC87Q9NVE4 849 aa19.52■□□□□ 0.72
PTPRN-205ENST00000440552 GYS1P13807 737 aa19.51■□□□□ 0.71
PTPRN-205ENST00000440552 TNNT2P45379 298 aaPredicted RBP19.51■□□□□ 0.71
PTPRN-205ENST00000440552 RBM42Q9BTD8 480 aaKnown RBP19.51■□□□□ 0.71
PTPRN-205ENST00000440552 C4AP0C0L4 1744 aa19.51■□□□□ 0.71
PTPRN-205ENST00000440552 KDM6AO15550 1401 aaPredicted RBP19.51■□□□□ 0.71
PTPRN-205ENST00000440552 N4BP2Q86UW6 1770 aaPredicted RBP19.5■□□□□ 0.71
PTPRN-205ENST00000440552 A0A0G2JLW4 131 aa19.5■□□□□ 0.71
PTPRN-205ENST00000440552 RFC4P35249 363 aa19.5■□□□□ 0.71
PTPRN-205ENST00000440552 BCS1LQ9Y276 419 aa19.5■□□□□ 0.71
PTPRN-205ENST00000440552 MYH14Q7Z406 1995 aaKnown RBP19.5■□□□□ 0.71
PTPRN-205ENST00000440552 CABP4P57796 275 aa19.49■□□□□ 0.71
PTPRN-205ENST00000440552 ZNF530Q6P9A1 599 aaPredicted RBP19.49■□□□□ 0.71
PTPRN-205ENST00000440552 CLSPNQ9HAW4 1339 aa19.49■□□□□ 0.71
PTPRN-205ENST00000440552 DPEP1P16444 411 aa19.48■□□□□ 0.71
PTPRN-205ENST00000440552 PARP3Q9Y6F1 533 aa19.48■□□□□ 0.71
PTPRN-205ENST00000440552 BRCA1P38398 1863 aaKnown RBP19.48■□□□□ 0.71
PTPRN-205ENST00000440552 POLR3GLQ9BT43 218 aa19.47■□□□□ 0.71
PTPRN-205ENST00000440552 TOMM70O94826 608 aa19.46■□□□□ 0.71
PTPRN-205ENST00000440552 MTHFSP49914 203 aa19.46■□□□□ 0.71
PTPRN-205ENST00000440552 APLP1P51693 650 aa19.46■□□□□ 0.71
PTPRN-205ENST00000440552 ARHGAP27Q6ZUM4 889 aa19.46■□□□□ 0.71
PTPRN-205ENST00000440552 FCHSD2O94868 740 aa19.45■□□□□ 0.7
PTPRN-205ENST00000440552 PANK3Q9H999 370 aa19.45■□□□□ 0.7
PTPRN-205ENST00000440552 ARFGEF1Q9Y6D6 1849 aa19.44■□□□□ 0.7
PTPRN-205ENST00000440552 KCNA3P22001 575 aa19.44■□□□□ 0.7
PTPRN-205ENST00000440552 C1orf141Q5JVX7 400 aa19.44■□□□□ 0.7
PTPRN-205ENST00000440552 CRKLP46109 303 aaKnown RBP19.43■□□□□ 0.7
PTPRN-205ENST00000440552 AEBP1Q8IUX7 1158 aa19.43■□□□□ 0.7
PTPRN-205ENST00000440552 PTCD1O75127 700 aaKnown RBP19.42■□□□□ 0.7
PTPRN-205ENST00000440552 EIF4G2P78344 907 aaKnown RBP eCLIP19.42■□□□□ 0.7
PTPRN-205ENST00000440552 NFATC2IPQ8NCF5 419 aa19.42■□□□□ 0.7
PTPRN-205ENST00000440552 PIM2Q9P1W9 311 aa19.42■□□□□ 0.7
PTPRN-205ENST00000440552 USP42Q9H9J4 1324 aaKnown RBP19.42■□□□□ 0.7
PTPRN-205ENST00000440552 MORC1Q86VD1 984 aa19.41■□□□□ 0.7
PTPRN-205ENST00000440552 DDR1Q08345 913 aa19.4■□□□□ 0.7
PTPRN-205ENST00000440552 FKBP8Q14318 412 aa19.4■□□□□ 0.7
PTPRN-205ENST00000440552 DALRD3Q5D0E6 543 aaKnown RBP19.4■□□□□ 0.7
PTPRN-205ENST00000440552 C9orf131Q5VYM1 1079 aa19.4■□□□□ 0.7
PTPRN-205ENST00000440552 DNAJC5GQ8N7S2 189 aa19.4■□□□□ 0.7
PTPRN-205ENST00000440552 RBM46Q8TBY0 533 aaKnown RBP19.4■□□□□ 0.7
PTPRN-205ENST00000440552 NMRK2Q9NPI5 230 aa19.4■□□□□ 0.7
PTPRN-205ENST00000440552 TJP1Q07157 1748 aa19.39■□□□□ 0.7
PTPRN-205ENST00000440552 SULT6B1Q6IMI4 303 aa19.39■□□□□ 0.69
PTPRN-205ENST00000440552 SRP68Q9UHB9 627 aaKnown RBP19.39■□□□□ 0.69
PTPRN-205ENST00000440552 SCN11AQ9UI33 1791 aa19.39■□□□□ 0.69
PTPRN-205ENST00000440552 HSPA5P11021 654 aaKnown RBP19.38■□□□□ 0.69
PTPRN-205ENST00000440552 IL13P35225 146 aa19.38■□□□□ 0.69
PTPRN-205ENST00000440552 INTS5Q6P9B9 1019 aaKnown RBP19.38■□□□□ 0.69
PTPRN-205ENST00000440552 ADAMTS7Q9UKP4 1686 aa19.37■□□□□ 0.69
PTPRN-205ENST00000440552 TM4SF1P30408 202 aa19.37■□□□□ 0.69
PTPRN-205ENST00000440552 AKAP4Q5JQC9 854 aa19.36■□□□□ 0.69
PTPRN-205ENST00000440552 KDM2BQ8NHM5 1336 aa19.35■□□□□ 0.69
PTPRN-205ENST00000440552 POLRMTO00411 1230 aaKnown RBP19.35■□□□□ 0.69
PTPRN-205ENST00000440552 SLC52A2Q9HAB3 445 aa19.35■□□□□ 0.69
PTPRN-205ENST00000440552 SOS1Q07889 1333 aaPredicted RBP19.34■□□□□ 0.69
PTPRN-205ENST00000440552 FSTL1Q12841 308 aa19.34■□□□□ 0.69
PTPRN-205ENST00000440552 KNSTRNQ9Y448 316 aa19.34■□□□□ 0.69
PTPRN-205ENST00000440552 ZPR1O75312 459 aa19.33■□□□□ 0.68
PTPRN-205ENST00000440552 DNAJC10Q8IXB1 793 aa19.33■□□□□ 0.68
PTPRN-205ENST00000440552 C16orf71Q8IYS4 520 aaPredicted RBP19.33■□□□□ 0.68
PTPRN-205ENST00000440552 MRC1P22897 1456 aa19.33■□□□□ 0.68
PTPRN-205ENST00000440552 CYP19A1P11511 503 aaPredicted RBP19.32■□□□□ 0.68
PTPRN-205ENST00000440552 CHRNA5P30532 468 aa19.32■□□□□ 0.68
PTPRN-205ENST00000440552 RNF181Q9P0P0 153 aa19.32■□□□□ 0.68
PTPRN-205ENST00000440552 SBF1O95248 1867 aa19.32■□□□□ 0.68
PTPRN-205ENST00000440552 WDR90Q96KV7 1748 aa19.31■□□□□ 0.68
PTPRN-205ENST00000440552 ZC3H4Q9UPT8 1303 aaKnown RBP19.31■□□□□ 0.68
PTPRN-205ENST00000440552 USPL1Q5W0Q7 1092 aa19.31■□□□□ 0.68
PTPRN-205ENST00000440552 NARFQ9UHQ1 456 aa19.31■□□□□ 0.68
PTPRN-205ENST00000440552 KCPQ6ZWJ8 1503 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms