RNA–Protein interactions for RNA: ENST00000440293.5

HDAC7-213, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-213ENST00000440293 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.35■■□□□ 1.49
HDAC7-213ENST00000440293 TMOD3Q9NYL9 352 aa24.35■■□□□ 1.49
HDAC7-213ENST00000440293 IGSF1Q8N6C5 1336 aa24.35■■□□□ 1.49
HDAC7-213ENST00000440293 TOGARAM1Q9Y4F4 1720 aa24.33■■□□□ 1.49
HDAC7-213ENST00000440293 DIAPH1O60610 1272 aaKnown RBP24.32■■□□□ 1.48
HDAC7-213ENST00000440293 PHKG2P15735 406 aa24.32■■□□□ 1.48
HDAC7-213ENST00000440293 PPP2R1AP30153 589 aa24.32■■□□□ 1.48
HDAC7-213ENST00000440293 ITGB4P16144 1822 aa24.32■■□□□ 1.48
HDAC7-213ENST00000440293 ATP10DQ9P241 1426 aa24.3■■□□□ 1.48
HDAC7-213ENST00000440293 AMIGO3Q86WK7 504 aa24.3■■□□□ 1.48
HDAC7-213ENST00000440293 LINC00116Q8NCU8 138 aa24.3■■□□□ 1.48
HDAC7-213ENST00000440293 ADCY9O60503 1353 aa24.29■■□□□ 1.48
HDAC7-213ENST00000440293 ZNF316A6NFI3 1004 aaPredicted RBP24.29■■□□□ 1.48
HDAC7-213ENST00000440293 PHF14O94880 888 aa24.29■■□□□ 1.48
HDAC7-213ENST00000440293 SULT6B1Q6IMI4 303 aa24.29■■□□□ 1.48
HDAC7-213ENST00000440293 CFAP53Q96M91 514 aa24.29■■□□□ 1.48
HDAC7-213ENST00000440293 GPBP1L1Q9HC44 474 aaPredicted RBP24.29■■□□□ 1.48
HDAC7-213ENST00000440293 UBR3Q6ZT12 1888 aa24.28■■□□□ 1.48
HDAC7-213ENST00000440293 ERVV-2B6SEH9 535 aa24.28■■□□□ 1.48
HDAC7-213ENST00000440293 ATP6V1AP38606 617 aa24.28■■□□□ 1.48
HDAC7-213ENST00000440293 ASAP1Q9ULH1 1129 aa24.28■■□□□ 1.48
HDAC7-213ENST00000440293 HSP90AB1P08238 724 aaKnown RBP24.27■■□□□ 1.48
HDAC7-213ENST00000440293 ITPK1Q13572 414 aa24.26■■□□□ 1.47
HDAC7-213ENST00000440293 ATG3Q9NT62 314 aa24.26■■□□□ 1.47
HDAC7-213ENST00000440293 GNPATO15228 680 aa24.25■■□□□ 1.47
HDAC7-213ENST00000440293 RALBP1Q15311 655 aa24.25■■□□□ 1.47
HDAC7-213ENST00000440293 PLEKHO1Q53GL0 409 aaPredicted RBP24.25■■□□□ 1.47
HDAC7-213ENST00000440293 AEBP1Q8IUX7 1158 aa24.25■■□□□ 1.47
HDAC7-213ENST00000440293 ADRA2BP18089 450 aa24.24■■□□□ 1.47
HDAC7-213ENST00000440293 AMOTQ4VCS5 1084 aa24.24■■□□□ 1.47
HDAC7-213ENST00000440293 RC3H1Q5TC82 1133 aaKnown RBP24.24■■□□□ 1.47
HDAC7-213ENST00000440293 NLGN1Q8N2Q7 840 aa24.24■■□□□ 1.47
HDAC7-213ENST00000440293 TGFB2P61812 414 aa24.23■■□□□ 1.47
HDAC7-213ENST00000440293 DCAF5Q96JK2 942 aa24.23■■□□□ 1.47
HDAC7-213ENST00000440293 U2SURPO15042 1029 aaKnown RBP24.22■■□□□ 1.47
HDAC7-213ENST00000440293 TRAPPC3LQ5T215 181 aa24.22■■□□□ 1.47
HDAC7-213ENST00000440293 NUDCQ9Y266 331 aa24.22■■□□□ 1.47
HDAC7-213ENST00000440293 RTCBQ9Y3I0 505 aaKnown RBP24.22■■□□□ 1.47
HDAC7-213ENST00000440293 CEP350Q5VT06 3117 aa24.21■■□□□ 1.47
HDAC7-213ENST00000440293 ZNF831Q5JPB2 1677 aa24.21■■□□□ 1.47
HDAC7-213ENST00000440293 KDRP35968 1356 aa24.21■■□□□ 1.47
HDAC7-213ENST00000440293 HMOX1P09601 288 aa24.21■■□□□ 1.47
HDAC7-213ENST00000440293 MMP10P09238 476 aa24.19■■□□□ 1.46
HDAC7-213ENST00000440293 SMIM5Q71RC9 77 aa24.19■■□□□ 1.46
HDAC7-213ENST00000440293 CNTNAP4Q9C0A0 1308 aa24.17■■□□□ 1.46
HDAC7-213ENST00000440293 HSPA6P17066 643 aa24.17■■□□□ 1.46
HDAC7-213ENST00000440293 COL3A1P02461 1466 aaPredicted RBP24.17■■□□□ 1.46
HDAC7-213ENST00000440293 RPS6KA4O75676 772 aa24.16■■□□□ 1.46
HDAC7-213ENST00000440293 ZNF530Q6P9A1 599 aaPredicted RBP24.16■■□□□ 1.46
HDAC7-213ENST00000440293 CICQ96RK0 1608 aaPredicted RBP24.16■■□□□ 1.46
HDAC7-213ENST00000440293 SLC4A9Q96Q91 983 aa24.15■■□□□ 1.46
HDAC7-213ENST00000440293 C1orf141Q5JVX7 400 aa24.14■■□□□ 1.45
HDAC7-213ENST00000440293 ARHGEF1Q92888 912 aaKnown RBP24.14■■□□□ 1.45
HDAC7-213ENST00000440293 CABP4P57796 275 aa24.13■■□□□ 1.45
HDAC7-213ENST00000440293 IFFO2Q5TF58 517 aa24.13■■□□□ 1.45
HDAC7-213ENST00000440293 RBM42Q9BTD8 480 aaKnown RBP24.13■■□□□ 1.45
HDAC7-213ENST00000440293 CCDC87Q9NVE4 849 aa24.13■■□□□ 1.45
HDAC7-213ENST00000440293 PXDNLA1KZ92 1463 aa24.13■■□□□ 1.45
HDAC7-213ENST00000440293 U2AF1L5P0DN76 240 aaPredicted RBP24.12■■□□□ 1.45
HDAC7-213ENST00000440293 RFC4P35249 363 aa24.12■■□□□ 1.45
HDAC7-213ENST00000440293 U2AF1Q01081 240 aaKnown RBP eCLIP24.12■■□□□ 1.45
HDAC7-213ENST00000440293 KIF13BQ9NQT8 1826 aa24.12■■□□□ 1.45
HDAC7-213ENST00000440293 C10orf71Q711Q0 1435 aa24.11■■□□□ 1.45
HDAC7-213ENST00000440293 GYS1P13807 737 aa24.11■■□□□ 1.45
HDAC7-213ENST00000440293 MYBBP1AQ9BQG0 1328 aaKnown RBP24.1■■□□□ 1.45
HDAC7-213ENST00000440293 KIF3CO14782 793 aa24.1■■□□□ 1.45
HDAC7-213ENST00000440293 ZNF526Q8TF50 670 aaPredicted RBP24.1■■□□□ 1.45
HDAC7-213ENST00000440293 PRKRIP1Q9H875 184 aaPredicted RBP24.1■■□□□ 1.45
HDAC7-213ENST00000440293 FCHSD2O94868 740 aa24.09■■□□□ 1.45
HDAC7-213ENST00000440293 AKAP4Q5JQC9 854 aa24.09■■□□□ 1.45
HDAC7-213ENST00000440293 PARP3Q9Y6F1 533 aa24.09■■□□□ 1.45
HDAC7-213ENST00000440293 KDM6AO15550 1401 aaPredicted RBP24.09■■□□□ 1.45
HDAC7-213ENST00000440293 MTHFSDQ2M296 383 aaKnown RBP24.08■■□□□ 1.45
HDAC7-213ENST00000440293 RSPH6AQ9H0K4 717 aa24.07■■□□□ 1.44
HDAC7-213ENST00000440293 BCS1LQ9Y276 419 aa24.07■■□□□ 1.44
HDAC7-213ENST00000440293 A0A0G2JLW4 131 aa24.06■■□□□ 1.44
HDAC7-213ENST00000440293 PRKAR2BP31323 418 aa24.06■■□□□ 1.44
HDAC7-213ENST00000440293 WWC3Q9ULE0 1092 aa24.06■■□□□ 1.44
HDAC7-213ENST00000440293 COL5A3P25940 1745 aaPredicted RBP24.05■■□□□ 1.44
HDAC7-213ENST00000440293 TOMM70O94826 608 aa24.04■■□□□ 1.44
HDAC7-213ENST00000440293 NFATC2IPQ8NCF5 419 aa24.04■■□□□ 1.44
HDAC7-213ENST00000440293 GAS2L2Q8NHY3 880 aa24.04■■□□□ 1.44
HDAC7-213ENST00000440293 DPEP1P16444 411 aa24.03■■□□□ 1.44
HDAC7-213ENST00000440293 PHACTR3Q96KR7 559 aa24.03■■□□□ 1.44
HDAC7-213ENST00000440293 C4AP0C0L4 1744 aa24.03■■□□□ 1.44
HDAC7-213ENST00000440293 KIAA1551Q9HCM1 1747 aa24.03■■□□□ 1.44
HDAC7-213ENST00000440293 CRKLP46109 303 aaKnown RBP24.02■■□□□ 1.44
HDAC7-213ENST00000440293 ARHGAP27Q6ZUM4 889 aa24.02■■□□□ 1.44
HDAC7-213ENST00000440293 PIM2Q9P1W9 311 aa24.02■■□□□ 1.44
HDAC7-213ENST00000440293 PTCD1O75127 700 aaKnown RBP24.01■■□□□ 1.43
HDAC7-213ENST00000440293 KCNA3P22001 575 aa24.01■■□□□ 1.43
HDAC7-213ENST00000440293 APLP1P51693 650 aa24.01■■□□□ 1.43
HDAC7-213ENST00000440293 PNNQ9H307 717 aaKnown RBP24.01■■□□□ 1.43
HDAC7-213ENST00000440293 USP42Q9H9J4 1324 aaKnown RBP24.01■■□□□ 1.43
HDAC7-213ENST00000440293 LGR6Q9HBX8 967 aa24■■□□□ 1.43
HDAC7-213ENST00000440293 RNMTO43148 476 aaKnown RBP23.99■■□□□ 1.43
HDAC7-213ENST00000440293 NEFMP07197 916 aa23.99■■□□□ 1.43
HDAC7-213ENST00000440293 GNAT3A8MTJ3 354 aa23.98■■□□□ 1.43
HDAC7-213ENST00000440293 N4BP2Q86UW6 1770 aaPredicted RBP23.96■■□□□ 1.43
HDAC7-213ENST00000440293 ANP32CO43423 234 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms