RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 POLKQ9UBT6 870 aa28.58■■■□□ 2.17
TRIM39-210ENST00000440271 TRAPPC3LQ5T215 181 aa28.57■■■□□ 2.16
TRIM39-210ENST00000440271 TGFB2P61812 414 aa28.56■■■□□ 2.16
TRIM39-210ENST00000440271 ANKRD26Q9UPS8 1709 aa28.55■■■□□ 2.16
TRIM39-210ENST00000440271 PXDNLA1KZ92 1463 aa28.55■■■□□ 2.16
TRIM39-210ENST00000440271 NLGN1Q8N2Q7 840 aa28.55■■■□□ 2.16
TRIM39-210ENST00000440271 RTCBQ9Y3I0 505 aaKnown RBP28.55■■■□□ 2.16
TRIM39-210ENST00000440271 CICQ96RK0 1608 aaPredicted RBP28.54■■■□□ 2.16
TRIM39-210ENST00000440271 A0A0G2JLW4 131 aa28.53■■■□□ 2.16
TRIM39-210ENST00000440271 SLC4A9Q96Q91 983 aa28.53■■■□□ 2.16
TRIM39-210ENST00000440271 BCS1LQ9Y276 419 aa28.53■■■□□ 2.16
TRIM39-210ENST00000440271 EIF4A2Q14240 407 aaKnown RBP28.52■■■□□ 2.16
TRIM39-210ENST00000440271 KDRP35968 1356 aa28.51■■■□□ 2.16
TRIM39-210ENST00000440271 ARHGEF1Q92888 912 aaKnown RBP28.51■■■□□ 2.15
TRIM39-210ENST00000440271 RBM42Q9BTD8 480 aaKnown RBP28.51■■■□□ 2.15
TRIM39-210ENST00000440271 ERVV-2B6SEH9 535 aa28.5■■■□□ 2.15
TRIM39-210ENST00000440271 RC3H1Q5TC82 1133 aaKnown RBP28.5■■■□□ 2.15
TRIM39-210ENST00000440271 KIF13BQ9NQT8 1826 aa28.49■■■□□ 2.15
TRIM39-210ENST00000440271 ADRA2BP18089 450 aa28.48■■■□□ 2.15
TRIM39-210ENST00000440271 TNNT2P45379 298 aaPredicted RBP28.48■■■□□ 2.15
TRIM39-210ENST00000440271 ARHGAP27Q6ZUM4 889 aa28.48■■■□□ 2.15
TRIM39-210ENST00000440271 KIAA1551Q9HCM1 1747 aa28.47■■■□□ 2.15
TRIM39-210ENST00000440271 C10orf71Q711Q0 1435 aa28.47■■■□□ 2.15
TRIM39-210ENST00000440271 TOMM70O94826 608 aa28.47■■■□□ 2.15
TRIM39-210ENST00000440271 GYS1P13807 737 aa28.47■■■□□ 2.15
TRIM39-210ENST00000440271 DPEP1P16444 411 aa28.47■■■□□ 2.15
TRIM39-210ENST00000440271 APLP1P51693 650 aa28.47■■■□□ 2.15
TRIM39-210ENST00000440271 DCAF5Q96JK2 942 aa28.47■■■□□ 2.15
TRIM39-210ENST00000440271 CCDC87Q9NVE4 849 aa28.47■■■□□ 2.15
TRIM39-210ENST00000440271 PLEKHG2Q9H7P9 1386 aa28.47■■■□□ 2.15
TRIM39-210ENST00000440271 N4BP2Q86UW6 1770 aaPredicted RBP28.47■■■□□ 2.15
TRIM39-210ENST00000440271 RPS6KA4O75676 772 aa28.46■■■□□ 2.15
TRIM39-210ENST00000440271 RFC4P35249 363 aa28.46■■■□□ 2.15
TRIM39-210ENST00000440271 CNTNAP4Q9C0A0 1308 aa28.45■■■□□ 2.15
TRIM39-210ENST00000440271 HSP90AB1P08238 724 aaKnown RBP28.45■■■□□ 2.14
TRIM39-210ENST00000440271 FCHSD2O94868 740 aa28.44■■■□□ 2.14
TRIM39-210ENST00000440271 PARP3Q9Y6F1 533 aa28.44■■■□□ 2.14
TRIM39-210ENST00000440271 PLEKHO1Q53GL0 409 aaPredicted RBP28.43■■■□□ 2.14
TRIM39-210ENST00000440271 ZNF831Q5JPB2 1677 aa28.42■■■□□ 2.14
TRIM39-210ENST00000440271 NMRK2Q9NPI5 230 aa28.42■■■□□ 2.14
TRIM39-210ENST00000440271 CABP4P57796 275 aa28.41■■■□□ 2.14
TRIM39-210ENST00000440271 DNAJC5GQ8N7S2 189 aa28.41■■■□□ 2.14
TRIM39-210ENST00000440271 KCNA3P22001 575 aa28.4■■■□□ 2.14
TRIM39-210ENST00000440271 C4AP0C0L4 1744 aa28.4■■■□□ 2.14
TRIM39-210ENST00000440271 POLR3GLQ9BT43 218 aa28.39■■■□□ 2.14
TRIM39-210ENST00000440271 AMOTQ4VCS5 1084 aa28.38■■■□□ 2.13
TRIM39-210ENST00000440271 ZNF530Q6P9A1 599 aaPredicted RBP28.38■■■□□ 2.13
TRIM39-210ENST00000440271 COL5A3P25940 1745 aaPredicted RBP28.38■■■□□ 2.13
TRIM39-210ENST00000440271 KDM6AO15550 1401 aaPredicted RBP28.37■■■□□ 2.13
TRIM39-210ENST00000440271 C9orf131Q5VYM1 1079 aa28.37■■■□□ 2.13
TRIM39-210ENST00000440271 PTCD1O75127 700 aaKnown RBP28.36■■■□□ 2.13
TRIM39-210ENST00000440271 PIM2Q9P1W9 311 aa28.36■■■□□ 2.13
TRIM39-210ENST00000440271 MTHFSP49914 203 aa28.35■■■□□ 2.13
TRIM39-210ENST00000440271 MYH14Q7Z406 1995 aaKnown RBP28.34■■■□□ 2.13
TRIM39-210ENST00000440271 CRKLP46109 303 aaKnown RBP28.34■■■□□ 2.13
TRIM39-210ENST00000440271 NFATC2IPQ8NCF5 419 aa28.33■■■□□ 2.13
TRIM39-210ENST00000440271 RBM46Q8TBY0 533 aaKnown RBP28.33■■■□□ 2.13
TRIM39-210ENST00000440271 SRP68Q9UHB9 627 aaKnown RBP28.33■■■□□ 2.13
TRIM39-210ENST00000440271 TIMELESSQ9UNS1 1208 aa28.33■■■□□ 2.13
TRIM39-210ENST00000440271 BRCA1P38398 1863 aaKnown RBP28.32■■■□□ 2.12
TRIM39-210ENST00000440271 FKBP8Q14318 412 aa28.32■■■□□ 2.12
TRIM39-210ENST00000440271 DALRD3Q5D0E6 543 aaKnown RBP28.31■■■□□ 2.12
TRIM39-210ENST00000440271 C1orf141Q5JVX7 400 aa28.31■■■□□ 2.12
TRIM39-210ENST00000440271 USP42Q9H9J4 1324 aaKnown RBP28.3■■■□□ 2.12
TRIM39-210ENST00000440271 DDR1Q08345 913 aa28.3■■■□□ 2.12
TRIM39-210ENST00000440271 AEBP1Q8IUX7 1158 aa28.3■■■□□ 2.12
TRIM39-210ENST00000440271 C16orf71Q8IYS4 520 aaPredicted RBP28.3■■■□□ 2.12
TRIM39-210ENST00000440271 PANK3Q9H999 370 aa28.29■■■□□ 2.12
TRIM39-210ENST00000440271 ARFGEF1Q9Y6D6 1849 aa28.27■■■□□ 2.12
TRIM39-210ENST00000440271 KDM2BQ8NHM5 1336 aa28.26■■■□□ 2.11
TRIM39-210ENST00000440271 CHRNA5P30532 468 aa28.26■■■□□ 2.11
TRIM39-210ENST00000440271 INTS5Q6P9B9 1019 aaKnown RBP28.26■■■□□ 2.11
TRIM39-210ENST00000440271 RNF181Q9P0P0 153 aa28.26■■■□□ 2.11
TRIM39-210ENST00000440271 FSTL1Q12841 308 aa28.25■■■□□ 2.11
TRIM39-210ENST00000440271 POLRMTO00411 1230 aaKnown RBP28.24■■■□□ 2.11
TRIM39-210ENST00000440271 TM4SF1P30408 202 aa28.24■■■□□ 2.11
TRIM39-210ENST00000440271 HTRA3P83110 453 aa28.24■■■□□ 2.11
TRIM39-210ENST00000440271 SULT6B1Q6IMI4 303 aa28.24■■■□□ 2.11
TRIM39-210ENST00000440271 KCPQ6ZWJ8 1503 aa28.23■■■□□ 2.11
TRIM39-210ENST00000440271 TRIM26Q12899 539 aaPredicted RBP28.23■■■□□ 2.11
TRIM39-210ENST00000440271 MORC1Q86VD1 984 aa28.23■■■□□ 2.11
TRIM39-210ENST00000440271 RRAGCQ9HB90 399 aa28.23■■■□□ 2.11
TRIM39-210ENST00000440271 KLRG1Q96E93 195 aa28.22■■■□□ 2.11
TRIM39-210ENST00000440271 WDR90Q96KV7 1748 aa28.21■■■□□ 2.11
TRIM39-210ENST00000440271 ZPR1O75312 459 aa28.2■■■□□ 2.1
TRIM39-210ENST00000440271 USPL1Q5W0Q7 1092 aa28.2■■■□□ 2.1
TRIM39-210ENST00000440271 TJP1Q07157 1748 aa28.2■■■□□ 2.1
TRIM39-210ENST00000440271 DNAJC10Q8IXB1 793 aa28.19■■■□□ 2.1
TRIM39-210ENST00000440271 JMYQ8N9B5 988 aa28.18■■■□□ 2.1
TRIM39-210ENST00000440271 IL13P35225 146 aa28.17■■■□□ 2.1
TRIM39-210ENST00000440271 EIF4G2P78344 907 aaKnown RBP eCLIP28.16■■■□□ 2.1
TRIM39-210ENST00000440271 AKAP4Q5JQC9 854 aa28.16■■■□□ 2.1
TRIM39-210ENST00000440271 SLC52A2Q9HAB3 445 aa28.16■■■□□ 2.1
TRIM39-210ENST00000440271 ADAMTS7Q9UKP4 1686 aa28.16■■■□□ 2.1
TRIM39-210ENST00000440271 SOS1Q07889 1333 aaPredicted RBP28.16■■■□□ 2.1
TRIM39-210ENST00000440271 HSPA5P11021 654 aaKnown RBP28.15■■■□□ 2.1
TRIM39-210ENST00000440271 LGR6Q9HBX8 967 aa28.15■■■□□ 2.1
TRIM39-210ENST00000440271 CYP19A1P11511 503 aaPredicted RBP28.14■■■□□ 2.1
TRIM39-210ENST00000440271 SBF1O95248 1867 aa28.13■■■□□ 2.09
TRIM39-210ENST00000440271 NFIXQ14938 502 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms