RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 ARGLU1Q9NWB6 273 aaPredicted RBP13.59□□□□□ -0.23
CCBE1-202ENST00000439986 SEC24BO95487 1268 aa13.59□□□□□ -0.23
CCBE1-202ENST00000439986 NLRP6P59044 892 aa13.59□□□□□ -0.23
CCBE1-202ENST00000439986 NFE2L2Q16236 605 aa13.59□□□□□ -0.23
CCBE1-202ENST00000439986 PSMA5P28066 241 aa13.59□□□□□ -0.23
CCBE1-202ENST00000439986 CCT4P50991 539 aaKnown RBP13.59□□□□□ -0.23
CCBE1-202ENST00000439986 CDR1P51861 262 aa13.59□□□□□ -0.23
CCBE1-202ENST00000439986 BMP2KLQ5H9B9 411 aa13.59□□□□□ -0.23
CCBE1-202ENST00000439986 WWC2Q6AWC2 1192 aa13.59□□□□□ -0.23
CCBE1-202ENST00000439986 MAGEC2Q9UBF1 373 aaPredicted RBP13.59□□□□□ -0.23
CCBE1-202ENST00000439986 PDCP20941 246 aa13.58□□□□□ -0.23
CCBE1-202ENST00000439986 HSP90B2PQ58FF3 399 aa13.58□□□□□ -0.23
CCBE1-202ENST00000439986 ABTB2Q8N961 1025 aa13.58□□□□□ -0.23
CCBE1-202ENST00000439986 NAT10Q9H0A0 1025 aaKnown RBP13.58□□□□□ -0.23
CCBE1-202ENST00000439986 TBC1D2BQ9UPU7 963 aa13.58□□□□□ -0.23
CCBE1-202ENST00000439986 CCDC192P0DO97 292 aa13.58□□□□□ -0.24
CCBE1-202ENST00000439986 SCAF11Q99590 1463 aaKnown RBP13.58□□□□□ -0.24
CCBE1-202ENST00000439986 MYL6BP14649 208 aa13.58□□□□□ -0.24
CCBE1-202ENST00000439986 CFAP43Q8NDM7 1665 aa13.58□□□□□ -0.24
CCBE1-202ENST00000439986 FAM69CQ0P6D2 419 aa13.57□□□□□ -0.24
CCBE1-202ENST00000439986 TBC1D9Q6ZT07 1266 aa13.57□□□□□ -0.24
CCBE1-202ENST00000439986 SYCP1Q15431 976 aa13.57□□□□□ -0.24
CCBE1-202ENST00000439986 ABCC11Q96J66 1382 aa13.57□□□□□ -0.24
CCBE1-202ENST00000439986 ZMAT2Q96NC0 199 aaKnown RBP13.57□□□□□ -0.24
CCBE1-202ENST00000439986 TCOF1Q13428 1488 aaKnown RBP13.57□□□□□ -0.24
CCBE1-202ENST00000439986 ADGRF5Q8IZF2 1346 aa13.57□□□□□ -0.24
CCBE1-202ENST00000439986 PER1O15534 1290 aaPredicted RBP13.57□□□□□ -0.24
CCBE1-202ENST00000439986 DDX54Q8TDD1 881 aaKnown RBP13.57□□□□□ -0.24
CCBE1-202ENST00000439986 BAG4O95429 457 aaKnown RBP13.57□□□□□ -0.24
CCBE1-202ENST00000439986 PDCL3Q9H2J4 239 aa13.57□□□□□ -0.24
CCBE1-202ENST00000439986 GPATCH8Q9UKJ3 1502 aaKnown RBP13.56□□□□□ -0.24
CCBE1-202ENST00000439986 ACBD3Q9H3P7 528 aa13.56□□□□□ -0.24
CCBE1-202ENST00000439986 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.56□□□□□ -0.24
CCBE1-202ENST00000439986 SMARCA5O60264 1052 aaPredicted RBP13.56□□□□□ -0.24
CCBE1-202ENST00000439986 NUP133Q8WUM0 1156 aa13.56□□□□□ -0.24
CCBE1-202ENST00000439986 TESK2Q96S53 571 aa13.56□□□□□ -0.24
CCBE1-202ENST00000439986 TANGO6Q9C0B7 1094 aa13.56□□□□□ -0.24
CCBE1-202ENST00000439986 UPF3BQ9BZI7 483 aaKnown RBP13.56□□□□□ -0.24
CCBE1-202ENST00000439986 SART3Q15020 963 aaKnown RBP13.55□□□□□ -0.24
CCBE1-202ENST00000439986 KLHL40Q2TBA0 621 aa13.55□□□□□ -0.24
CCBE1-202ENST00000439986 ATAD2Q6PL18 1390 aa13.55□□□□□ -0.24
CCBE1-202ENST00000439986 MKL2Q9ULH7 1088 aa13.55□□□□□ -0.24
CCBE1-202ENST00000439986 PRAG1Q86YV5 1406 aa13.55□□□□□ -0.24
CCBE1-202ENST00000439986 GAS2L2Q8NHY3 880 aa13.55□□□□□ -0.24
CCBE1-202ENST00000439986 EXOC6BQ9Y2D4 811 aa13.55□□□□□ -0.24
CCBE1-202ENST00000439986 CYP46A1Q9Y6A2 500 aa13.55□□□□□ -0.24
CCBE1-202ENST00000439986 CCDC191Q8NCU4 936 aa13.55□□□□□ -0.24
CCBE1-202ENST00000439986 TNNQ9UQP3 1299 aa13.55□□□□□ -0.24
CCBE1-202ENST00000439986 KDM2BQ8NHM5 1336 aa13.54□□□□□ -0.24
CCBE1-202ENST00000439986 MATR3P43243 847 aaKnown RBP eCLIP13.54□□□□□ -0.24
CCBE1-202ENST00000439986 ATP6V1E2Q96A05 226 aa13.54□□□□□ -0.24
CCBE1-202ENST00000439986 RPGRIP1LQ68CZ1 1315 aa13.54□□□□□ -0.24
CCBE1-202ENST00000439986 BICDL1Q6ZP65 573 aa13.54□□□□□ -0.24
CCBE1-202ENST00000439986 IL1RAPL2Q9NP60 686 aa13.54□□□□□ -0.24
CCBE1-202ENST00000439986 KRT85P78386 507 aa13.54□□□□□ -0.24
CCBE1-202ENST00000439986 RRS1Q15050 365 aaKnown RBP13.54□□□□□ -0.24
CCBE1-202ENST00000439986 SECISBP2LQ93073 1101 aaKnown RBP13.54□□□□□ -0.24
CCBE1-202ENST00000439986 TNMDQ9H2S6 317 aa13.54□□□□□ -0.24
CCBE1-202ENST00000439986 KINO60870 393 aaKnown RBP13.53□□□□□ -0.24
CCBE1-202ENST00000439986 RLBP1P12271 317 aa13.53□□□□□ -0.24
CCBE1-202ENST00000439986 SRCIN1Q9C0H9 1055 aa13.53□□□□□ -0.24
CCBE1-202ENST00000439986 CHMP4BP1P59074 171 aa13.53□□□□□ -0.24
CCBE1-202ENST00000439986 CCDC85AQ96PX6 553 aaPredicted RBP13.53□□□□□ -0.24
CCBE1-202ENST00000439986 CCDC112Q8NEF3 446 aa13.53□□□□□ -0.24
CCBE1-202ENST00000439986 KIF14Q15058 1648 aa13.53□□□□□ -0.24
CCBE1-202ENST00000439986 DCAF8L1A6NGE4 600 aa13.53□□□□□ -0.24
CCBE1-202ENST00000439986 DDX12PQ92771 950 aa13.53□□□□□ -0.24
CCBE1-202ENST00000439986 PIP4K2BP78356 416 aa13.52□□□□□ -0.24
CCBE1-202ENST00000439986 LARP1BQ659C4 914 aaKnown RBP13.52□□□□□ -0.24
CCBE1-202ENST00000439986 MORC4Q8TE76 937 aa13.52□□□□□ -0.24
CCBE1-202ENST00000439986 CENPHQ9H3R5 247 aa13.52□□□□□ -0.24
CCBE1-202ENST00000439986 SERPINC1P01008 464 aa13.52□□□□□ -0.25
CCBE1-202ENST00000439986 NF2P35240 595 aa13.52□□□□□ -0.25
CCBE1-202ENST00000439986 HDGFL1Q5TGJ6 251 aa13.52□□□□□ -0.25
CCBE1-202ENST00000439986 TAX1BP1Q86VP1 789 aa13.52□□□□□ -0.25
CCBE1-202ENST00000439986 SLC3A2P08195 630 aaKnown RBP13.52□□□□□ -0.25
CCBE1-202ENST00000439986 NUCB1Q02818 461 aa13.52□□□□□ -0.25
CCBE1-202ENST00000439986 STK38Q15208 465 aa13.52□□□□□ -0.25
CCBE1-202ENST00000439986 KIF4AO95239 1232 aa13.52□□□□□ -0.25
CCBE1-202ENST00000439986 DCTN1Q14203 1278 aa13.52□□□□□ -0.25
CCBE1-202ENST00000439986 SMARCE1Q969G3 411 aa13.52□□□□□ -0.25
CCBE1-202ENST00000439986 URB2Q14146 1524 aaKnown RBP13.51□□□□□ -0.25
CCBE1-202ENST00000439986 STK10O94804 968 aaKnown RBP13.51□□□□□ -0.25
CCBE1-202ENST00000439986 CTR9Q6PD62 1173 aa13.51□□□□□ -0.25
CCBE1-202ENST00000439986 ASXL1Q8IXJ9 1541 aa13.51□□□□□ -0.25
CCBE1-202ENST00000439986 BRD3Q15059 726 aa13.51□□□□□ -0.25
CCBE1-202ENST00000439986 TEX14Q8IWB6 1497 aa13.51□□□□□ -0.25
CCBE1-202ENST00000439986 FILIP1LQ4L180 1135 aa13.51□□□□□ -0.25
CCBE1-202ENST00000439986 MIPOL1Q8TD10 442 aa13.51□□□□□ -0.25
CCBE1-202ENST00000439986 INCENPQ9NQS7 918 aa13.51□□□□□ -0.25
CCBE1-202ENST00000439986 CCDC69A6NI79 296 aa13.51□□□□□ -0.25
CCBE1-202ENST00000439986 CCDC158Q5M9N0 1113 aa13.51□□□□□ -0.25
CCBE1-202ENST00000439986 LRCH2Q5VUJ6 765 aa13.51□□□□□ -0.25
CCBE1-202ENST00000439986 TXLNAP40222 546 aa13.51□□□□□ -0.25
CCBE1-202ENST00000439986 FKBP4Q02790 459 aaKnown RBP eCLIP13.51□□□□□ -0.25
CCBE1-202ENST00000439986 RBM27Q9P2N5 1060 aaKnown RBP13.51□□□□□ -0.25
CCBE1-202ENST00000439986 CWC27Q6UX04 472 aaKnown RBP13.5□□□□□ -0.25
CCBE1-202ENST00000439986 RPAINQ86UA6 219 aa13.5□□□□□ -0.25
CCBE1-202ENST00000439986 MX1P20591 662 aa13.5□□□□□ -0.25
CCBE1-202ENST00000439986 TXNDC2Q86VQ3 553 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms