RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 DCAF5Q96JK2 942 aa12.95□□□□□ -0.34
CBX5-202ENST00000439541 DOT1LQ8TEK3 1739 aa12.94□□□□□ -0.34
CBX5-202ENST00000439541 KCNQ3O43525 872 aa12.94□□□□□ -0.34
CBX5-202ENST00000439541 DDB1Q16531 1140 aa12.94□□□□□ -0.34
CBX5-202ENST00000439541 C8orf58Q8NAV2 365 aa12.94□□□□□ -0.34
CBX5-202ENST00000439541 GJD4Q96KN9 370 aaPredicted RBP12.94□□□□□ -0.34
CBX5-202ENST00000439541 BCL2L13Q9BXK5 485 aa12.94□□□□□ -0.34
CBX5-202ENST00000439541 EXOC5O00471 708 aa12.93□□□□□ -0.34
CBX5-202ENST00000439541 IRX6P78412 446 aaPredicted RBP12.93□□□□□ -0.34
CBX5-202ENST00000439541 TAF7Q15545 349 aaPredicted RBP12.93□□□□□ -0.34
CBX5-202ENST00000439541 CDCA7Q9BWT1 371 aaPredicted RBP12.93□□□□□ -0.34
CBX5-202ENST00000439541 SLC52A2Q9HAB3 445 aa12.93□□□□□ -0.34
CBX5-202ENST00000439541 TRPC5Q9UL62 973 aaPredicted RBP12.93□□□□□ -0.34
CBX5-202ENST00000439541 HSP90AB1P08238 724 aaKnown RBP12.92□□□□□ -0.34
CBX5-202ENST00000439541 BTBD11A6QL63 1104 aa12.92□□□□□ -0.34
CBX5-202ENST00000439541 BCAR3O75815 825 aa12.92□□□□□ -0.34
CBX5-202ENST00000439541 NKX1-1Q15270 411 aaPredicted RBP12.92□□□□□ -0.34
CBX5-202ENST00000439541 MARCH10Q8NA82 808 aaPredicted RBP12.92□□□□□ -0.34
CBX5-202ENST00000439541 NFATC2IPQ8NCF5 419 aa12.92□□□□□ -0.34
CBX5-202ENST00000439541 QTRT2Q9H974 415 aaKnown RBP12.92□□□□□ -0.34
CBX5-202ENST00000439541 RBM19Q9Y4C8 960 aaKnown RBP12.92□□□□□ -0.34
CBX5-202ENST00000439541 SLC39A6Q13433 755 aa12.91□□□□□ -0.34
CBX5-202ENST00000439541 TCERG1O14776 1098 aaKnown RBP12.9□□□□□ -0.34
CBX5-202ENST00000439541 PLIN1O60240 522 aa12.9□□□□□ -0.34
CBX5-202ENST00000439541 RARSP54136 660 aaKnown RBP12.9□□□□□ -0.34
CBX5-202ENST00000439541 CABP4P57796 275 aa12.9□□□□□ -0.34
CBX5-202ENST00000439541 TWISTNBQ3B726 338 aaPredicted RBP12.9□□□□□ -0.34
CBX5-202ENST00000439541 PAPPAQ13219 1627 aa12.9□□□□□ -0.34
CBX5-202ENST00000439541 RRP1P56182 461 aaKnown RBP12.9□□□□□ -0.34
CBX5-202ENST00000439541 VAMP4O75379 141 aa12.89□□□□□ -0.35
CBX5-202ENST00000439541 FAM182BQ5T319 152 aa12.89□□□□□ -0.35
CBX5-202ENST00000439541 RNF123Q5XPI4 1314 aa12.89□□□□□ -0.35
CBX5-202ENST00000439541 ITGB4P16144 1822 aa12.89□□□□□ -0.35
CBX5-202ENST00000439541 C5P01031 1676 aa12.89□□□□□ -0.35
CBX5-202ENST00000439541 SSH1Q8WYL5 1049 aa12.88□□□□□ -0.35
CBX5-202ENST00000439541 EIF4A1P60842 406 aaKnown RBP12.88□□□□□ -0.35
CBX5-202ENST00000439541 SYTL4Q96C24 671 aaPredicted RBP12.88□□□□□ -0.35
CBX5-202ENST00000439541 ACSBG1Q96GR2 724 aa12.88□□□□□ -0.35
CBX5-202ENST00000439541 SMC4Q9NTJ3 1288 aa12.88□□□□□ -0.35
CBX5-202ENST00000439541 BABAM1Q9NWV8 329 aa12.88□□□□□ -0.35
CBX5-202ENST00000439541 PPP4R2Q9NY27 417 aa12.88□□□□□ -0.35
CBX5-202ENST00000439541 PRAMEF22A3QJZ6 481 aa12.87□□□□□ -0.35
CBX5-202ENST00000439541 ERVV-2B6SEH9 535 aa12.87□□□□□ -0.35
CBX5-202ENST00000439541 ZNF790Q6PG37 636 aa12.87□□□□□ -0.35
CBX5-202ENST00000439541 SEPT12Q8IYM1 358 aa12.87□□□□□ -0.35
CBX5-202ENST00000439541 NECTIN2Q92692 538 aa12.87□□□□□ -0.35
CBX5-202ENST00000439541 TMOD3Q9NYL9 352 aa12.87□□□□□ -0.35
CBX5-202ENST00000439541 KCPQ6ZWJ8 1503 aa12.87□□□□□ -0.35
CBX5-202ENST00000439541 UBR2Q8IWV8 1755 aa12.86□□□□□ -0.35
CBX5-202ENST00000439541 CT47B1P0C2W7 299 aaPredicted RBP12.86□□□□□ -0.35
CBX5-202ENST00000439541 ZNF772Q68DY9 489 aaPredicted RBP12.86□□□□□ -0.35
CBX5-202ENST00000439541 PIGBQ92521 554 aa12.86□□□□□ -0.35
CBX5-202ENST00000439541 RGS17Q9UGC6 210 aaPredicted RBP12.86□□□□□ -0.35
CBX5-202ENST00000439541 BCL9O00512 1426 aa12.86□□□□□ -0.35
CBX5-202ENST00000439541 PRIM1P49642 420 aaKnown RBP12.85□□□□□ -0.35
CBX5-202ENST00000439541 C20orf194Q5TEA3 1177 aa12.85□□□□□ -0.35
CBX5-202ENST00000439541 TNNQ9UQP3 1299 aa12.85□□□□□ -0.35
CBX5-202ENST00000439541 FRAT1Q92837 279 aaPredicted RBP12.85□□□□□ -0.35
CBX5-202ENST00000439541 ZNF496Q96IT1 587 aaPredicted RBP12.85□□□□□ -0.35
CBX5-202ENST00000439541 BRWD3Q6RI45 1802 aa12.85□□□□□ -0.35
CBX5-202ENST00000439541 EP400Q96L91 3159 aa12.84□□□□□ -0.35
CBX5-202ENST00000439541 ONECUT3O60422 494 aaPredicted RBP12.84□□□□□ -0.35
CBX5-202ENST00000439541 TTC5Q8N0Z6 440 aa12.84□□□□□ -0.35
CBX5-202ENST00000439541 ASAP1Q9ULH1 1129 aa12.84□□□□□ -0.35
CBX5-202ENST00000439541 HEG1Q9ULI3 1381 aa12.84□□□□□ -0.35
CBX5-202ENST00000439541 KCNQ2O43526 872 aa12.83□□□□□ -0.35
CBX5-202ENST00000439541 PTF1AQ7RTS3 328 aa12.83□□□□□ -0.35
CBX5-202ENST00000439541 RGS12O14924 1447 aa12.83□□□□□ -0.36
CBX5-202ENST00000439541 PTCD1O75127 700 aaKnown RBP12.83□□□□□ -0.36
CBX5-202ENST00000439541 GIGYF1O75420 1035 aaPredicted RBP12.83□□□□□ -0.36
CBX5-202ENST00000439541 CANXP27824 592 aaKnown RBP12.83□□□□□ -0.36
CBX5-202ENST00000439541 RBM6P78332 1123 aaKnown RBP12.83□□□□□ -0.36
CBX5-202ENST00000439541 POTEAQ6S8J7 498 aa12.83□□□□□ -0.36
CBX5-202ENST00000439541 MRPL50Q8N5N7 158 aaKnown RBP12.83□□□□□ -0.36
CBX5-202ENST00000439541 EIF2S2P20042 333 aaKnown RBP12.82□□□□□ -0.36
CBX5-202ENST00000439541 ALDH1L2Q3SY69 923 aa12.82□□□□□ -0.36
CBX5-202ENST00000439541 HDGFL1Q5TGJ6 251 aa12.82□□□□□ -0.36
CBX5-202ENST00000439541 ILDR1Q86SU0 546 aaPredicted RBP12.82□□□□□ -0.36
CBX5-202ENST00000439541 ATG3Q9NT62 314 aa12.82□□□□□ -0.36
CBX5-202ENST00000439541 LAMB4A4D0S4 1761 aa12.82□□□□□ -0.36
CBX5-202ENST00000439541 NHSQ6T4R5 1651 aa12.82□□□□□ -0.36
CBX5-202ENST00000439541 NOB1Q9ULX3 412 aaKnown RBP12.81□□□□□ -0.36
CBX5-202ENST00000439541 ANXA1P04083 346 aa12.81□□□□□ -0.36
CBX5-202ENST00000439541 FMNL2Q96PY5 1086 aa12.81□□□□□ -0.36
CBX5-202ENST00000439541 KAT6BQ8WYB5 2073 aa12.8□□□□□ -0.36
CBX5-202ENST00000439541 PANK1Q8TE04 598 aa12.8□□□□□ -0.36
CBX5-202ENST00000439541 CLUAP1Q96AJ1 413 aa12.8□□□□□ -0.36
CBX5-202ENST00000439541 ZNF428Q96B54 188 aa12.8□□□□□ -0.36
CBX5-202ENST00000439541 CHPF2Q9P2E5 772 aa12.8□□□□□ -0.36
CBX5-202ENST00000439541 KIF16BQ96L93 1317 aa12.79□□□□□ -0.36
CBX5-202ENST00000439541 HOXB7P09629 217 aa12.79□□□□□ -0.36
CBX5-202ENST00000439541 RLBP1P12271 317 aa12.79□□□□□ -0.36
CBX5-202ENST00000439541 RXRBP28702 533 aa12.79□□□□□ -0.36
CBX5-202ENST00000439541 PIP4K2AP48426 406 aaPredicted RBP12.79□□□□□ -0.36
CBX5-202ENST00000439541 PROSER3Q2NL68 480 aa12.79□□□□□ -0.36
CBX5-202ENST00000439541 G2E3Q7L622 706 aa12.79□□□□□ -0.36
CBX5-202ENST00000439541 BTAF1O14981 1849 aa12.79□□□□□ -0.36
CBX5-202ENST00000439541 TJP1Q07157 1748 aa12.79□□□□□ -0.36
CBX5-202ENST00000439541 SLC4A2P04920 1241 aa12.78□□□□□ -0.36
CBX5-202ENST00000439541 TRIM27P14373 513 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms