RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 POTEB3A0JP26 581 aa12.9□□□□□ -0.34
LSMEM1-202ENST00000439068 POTEBQ6S5H4 581 aa12.9□□□□□ -0.34
LSMEM1-202ENST00000439068 CABLES1Q8TDN4 633 aa12.9□□□□□ -0.34
LSMEM1-202ENST00000439068 ZMYND15Q9H091 742 aa12.9□□□□□ -0.34
LSMEM1-202ENST00000439068 RRBP1Q9P2E9 1410 aaKnown RBP12.89□□□□□ -0.35
LSMEM1-202ENST00000439068 LIMD1Q9UGP4 676 aa12.89□□□□□ -0.35
LSMEM1-202ENST00000439068 ARHGEF10O15013 1369 aa12.89□□□□□ -0.35
LSMEM1-202ENST00000439068 DHX57Q6P158 1386 aaKnown RBP12.89□□□□□ -0.35
LSMEM1-202ENST00000439068 ACIN1Q9UKV3 1341 aaKnown RBP12.88□□□□□ -0.35
LSMEM1-202ENST00000439068 TECPR2O15040 1411 aa12.88□□□□□ -0.35
LSMEM1-202ENST00000439068 FAM83GA6ND36 823 aa12.88□□□□□ -0.35
LSMEM1-202ENST00000439068 CLK2P49760 499 aaKnown RBP12.88□□□□□ -0.35
LSMEM1-202ENST00000439068 POGKQ9P215 609 aa12.88□□□□□ -0.35
LSMEM1-202ENST00000439068 SBNO1A3KN83 1393 aa12.87□□□□□ -0.35
LSMEM1-202ENST00000439068 SULF1Q8IWU6 871 aa12.87□□□□□ -0.35
LSMEM1-202ENST00000439068 RDH13Q8NBN7 331 aa12.87□□□□□ -0.35
LSMEM1-202ENST00000439068 MPHOSPH9Q99550 1183 aa12.87□□□□□ -0.35
LSMEM1-202ENST00000439068 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.87□□□□□ -0.35
LSMEM1-202ENST00000439068 C14orf93Q9H972 538 aaKnown RBP12.87□□□□□ -0.35
LSMEM1-202ENST00000439068 RABGEF1Q9UJ41 708 aa12.87□□□□□ -0.35
LSMEM1-202ENST00000439068 PLEKHH1Q9ULM0 1364 aa12.86□□□□□ -0.35
LSMEM1-202ENST00000439068 FAM98CQ17RN3 349 aaKnown RBP12.86□□□□□ -0.35
LSMEM1-202ENST00000439068 SWT1Q5T5J6 900 aaKnown RBP12.86□□□□□ -0.35
LSMEM1-202ENST00000439068 TNS3Q68CZ2 1445 aa12.86□□□□□ -0.35
LSMEM1-202ENST00000439068 YTHDC2Q9H6S0 1430 aaKnown RBP12.86□□□□□ -0.35
LSMEM1-202ENST00000439068 MARF1Q9Y4F3 1742 aaKnown RBP12.85□□□□□ -0.35
LSMEM1-202ENST00000439068 PPLO60437 1756 aa12.85□□□□□ -0.35
LSMEM1-202ENST00000439068 SAFB2Q14151 953 aaKnown RBP eCLIP12.85□□□□□ -0.35
LSMEM1-202ENST00000439068 RIC3Q7Z5B4 369 aa12.85□□□□□ -0.35
LSMEM1-202ENST00000439068 NUTM1Q86Y26 1132 aa12.85□□□□□ -0.35
LSMEM1-202ENST00000439068 ZNF687Q8N1G0 1237 aa12.85□□□□□ -0.35
LSMEM1-202ENST00000439068 PMFBP1Q8TBY8 1022 aa12.85□□□□□ -0.35
LSMEM1-202ENST00000439068 PRAM1Q96QH2 718 aa12.85□□□□□ -0.35
LSMEM1-202ENST00000439068 BTG4Q9NY30 223 aa12.85□□□□□ -0.35
LSMEM1-202ENST00000439068 VPS9D1Q9Y2B5 631 aa12.85□□□□□ -0.35
LSMEM1-202ENST00000439068 GPRASP1Q5JY77 1395 aa12.84□□□□□ -0.35
LSMEM1-202ENST00000439068 MOXD2PA6NHM9 499 aa12.84□□□□□ -0.35
LSMEM1-202ENST00000439068 NDUFV2P19404 249 aa12.84□□□□□ -0.35
LSMEM1-202ENST00000439068 HRCP23327 699 aa12.84□□□□□ -0.35
LSMEM1-202ENST00000439068 SLC4A5Q9BY07 1137 aa12.84□□□□□ -0.35
LSMEM1-202ENST00000439068 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.84□□□□□ -0.35
LSMEM1-202ENST00000439068 GLI3P10071 1580 aa12.83□□□□□ -0.36
LSMEM1-202ENST00000439068 SLC10A3P09131 477 aa12.83□□□□□ -0.36
LSMEM1-202ENST00000439068 FLIIQ13045 1269 aa12.83□□□□□ -0.36
LSMEM1-202ENST00000439068 KIF1AQ12756 1690 aa12.83□□□□□ -0.36
LSMEM1-202ENST00000439068 DIXDC1Q155Q3 683 aa12.82□□□□□ -0.36
LSMEM1-202ENST00000439068 CSPP1Q1MSJ5 1256 aa12.82□□□□□ -0.36
LSMEM1-202ENST00000439068 CFAP70Q5T0N1 1121 aa12.82□□□□□ -0.36
LSMEM1-202ENST00000439068 HS3ST6Q96QI5 342 aa12.82□□□□□ -0.36
LSMEM1-202ENST00000439068 USP32Q8NFA0 1604 aa12.81□□□□□ -0.36
LSMEM1-202ENST00000439068 PIK3C2GO75747 1445 aa12.81□□□□□ -0.36
LSMEM1-202ENST00000439068 SPATA31E1Q6ZUB1 1445 aa12.81□□□□□ -0.36
LSMEM1-202ENST00000439068 SPTLC1O15269 473 aa12.81□□□□□ -0.36
LSMEM1-202ENST00000439068 PBX2P40425 430 aa12.81□□□□□ -0.36
LSMEM1-202ENST00000439068 NGDNQ8NEJ9 315 aaKnown RBP12.81□□□□□ -0.36
LSMEM1-202ENST00000439068 RSBN1LQ6PCB5 846 aaPredicted RBP12.8□□□□□ -0.36
LSMEM1-202ENST00000439068 PCDHB15Q9Y5E8 787 aa12.8□□□□□ -0.36
LSMEM1-202ENST00000439068 EIF3AQ14152 1382 aaKnown RBP12.8□□□□□ -0.36
LSMEM1-202ENST00000439068 NRXN1Q9ULB1 1477 aa12.79□□□□□ -0.36
LSMEM1-202ENST00000439068 R3HDM1Q15032 1099 aaKnown RBP12.79□□□□□ -0.36
LSMEM1-202ENST00000439068 FAM196AQ6ZSG2 479 aa12.79□□□□□ -0.36
LSMEM1-202ENST00000439068 PRDM11Q9NQV5 511 aa12.79□□□□□ -0.36
LSMEM1-202ENST00000439068 KDM4AO75164 1064 aa12.78□□□□□ -0.36
LSMEM1-202ENST00000439068 GCGRP47871 477 aa12.78□□□□□ -0.36
LSMEM1-202ENST00000439068 MCM6Q14566 821 aa12.78□□□□□ -0.36
LSMEM1-202ENST00000439068 LCE2DQ5TA82 110 aaPredicted RBP12.78□□□□□ -0.36
LSMEM1-202ENST00000439068 FMN2Q9NZ56 1722 aa12.78□□□□□ -0.36
LSMEM1-202ENST00000439068 SPATA31A5Q5VU36 1347 aa12.78□□□□□ -0.36
LSMEM1-202ENST00000439068 SPATA31A7Q8IWB4 1347 aa12.78□□□□□ -0.36
LSMEM1-202ENST00000439068 ANKARQ7Z5J8 1434 aa12.78□□□□□ -0.36
LSMEM1-202ENST00000439068 RFC5P40937 340 aa12.77□□□□□ -0.37
LSMEM1-202ENST00000439068 EVA1CP58658 441 aa12.77□□□□□ -0.37
LSMEM1-202ENST00000439068 QPCTQ16769 361 aa12.77□□□□□ -0.37
LSMEM1-202ENST00000439068 SAMD7Q7Z3H4 446 aa12.77□□□□□ -0.37
LSMEM1-202ENST00000439068 CLUAP1Q96AJ1 413 aa12.77□□□□□ -0.37
LSMEM1-202ENST00000439068 TRAK1Q9UPV9 953 aa12.77□□□□□ -0.37
LSMEM1-202ENST00000439068 NWD2Q9ULI1 1742 aa12.76□□□□□ -0.37
LSMEM1-202ENST00000439068 BRWD3Q6RI45 1802 aa12.76□□□□□ -0.37
LSMEM1-202ENST00000439068 PDE3BQ13370 1112 aa12.76□□□□□ -0.37
LSMEM1-202ENST00000439068 NBPF8Q3BBV2 869 aa12.76□□□□□ -0.37
LSMEM1-202ENST00000439068 FAM182BQ5T319 152 aa12.76□□□□□ -0.37
LSMEM1-202ENST00000439068 NBPF14Q5TI25 921 aa12.76□□□□□ -0.37
LSMEM1-202ENST00000439068 HLA-CQ95604 372 aa12.76□□□□□ -0.37
LSMEM1-202ENST00000439068 HIRIP3Q9BW71 556 aaPredicted RBP12.76□□□□□ -0.37
LSMEM1-202ENST00000439068 WASLO00401 505 aaPredicted RBP12.75□□□□□ -0.37
LSMEM1-202ENST00000439068 LRP5O75197 1615 aa12.75□□□□□ -0.37
LSMEM1-202ENST00000439068 APBA3O96018 575 aa12.75□□□□□ -0.37
LSMEM1-202ENST00000439068 EZH2Q15910 746 aaKnown RBP12.75□□□□□ -0.37
LSMEM1-202ENST00000439068 KNDC1Q76NI1 1749 aa12.75□□□□□ -0.37
LSMEM1-202ENST00000439068 STAC3Q96MF2 364 aa12.75□□□□□ -0.37
LSMEM1-202ENST00000439068 SNRKQ9NRH2 765 aa12.75□□□□□ -0.37
LSMEM1-202ENST00000439068 BHMG1C9JSJ3 638 aaPredicted RBP12.74□□□□□ -0.37
LSMEM1-202ENST00000439068 TRIM37O94972 964 aa12.74□□□□□ -0.37
LSMEM1-202ENST00000439068 GUCA2AQ02747 115 aa12.74□□□□□ -0.37
LSMEM1-202ENST00000439068 STRN4Q9NRL3 753 aa12.74□□□□□ -0.37
LSMEM1-202ENST00000439068 RTL5Q5HYW3 569 aaPredicted RBP12.73□□□□□ -0.37
LSMEM1-202ENST00000439068 CAMKK2Q96RR4 588 aa12.73□□□□□ -0.37
LSMEM1-202ENST00000439068 PARD3Q8TEW0 1356 aa12.72□□□□□ -0.37
LSMEM1-202ENST00000439068 SPATA31A1Q5TZJ5 1347 aa12.72□□□□□ -0.37
LSMEM1-202ENST00000439068 C11orf95C9JLR9 678 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms