RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 MSL1Q68DK7 614 aa12.61□□□□□ -0.39
AC011228.1-201ENST00000439027 POLKQ9UBT6 870 aa12.61□□□□□ -0.39
AC011228.1-201ENST00000439027 PIGBQ92521 554 aa12.6□□□□□ -0.39
AC011228.1-201ENST00000439027 FKBP8Q14318 412 aa12.59□□□□□ -0.39
AC011228.1-201ENST00000439027 ZNF784Q8NCA9 323 aaPredicted RBP12.59□□□□□ -0.39
AC011228.1-201ENST00000439027 FLAD1Q8NFF5 587 aa12.59□□□□□ -0.39
AC011228.1-201ENST00000439027 AK7Q96M32 723 aa12.59□□□□□ -0.39
AC011228.1-201ENST00000439027 PANK3Q9H999 370 aa12.59□□□□□ -0.39
AC011228.1-201ENST00000439027 LY75O60449 1722 aa12.59□□□□□ -0.39
AC011228.1-201ENST00000439027 EIF4A2Q14240 407 aaKnown RBP12.58□□□□□ -0.4
AC011228.1-201ENST00000439027 NKX1-1Q15270 411 aaPredicted RBP12.58□□□□□ -0.4
AC011228.1-201ENST00000439027 NLGN2Q8NFZ4 835 aa12.58□□□□□ -0.4
AC011228.1-201ENST00000439027 TMOD3Q9NYL9 352 aa12.58□□□□□ -0.4
AC011228.1-201ENST00000439027 MAP2P11137 1827 aaKnown RBP12.58□□□□□ -0.4
AC011228.1-201ENST00000439027 IFNL2Q8IZJ0 200 aa12.57□□□□□ -0.4
AC011228.1-201ENST00000439027 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.57□□□□□ -0.4
AC011228.1-201ENST00000439027 TUBGCP6Q96RT7 1819 aa12.57□□□□□ -0.4
AC011228.1-201ENST00000439027 QSER1Q2KHR3 1735 aa12.57□□□□□ -0.4
AC011228.1-201ENST00000439027 ZNF316A6NFI3 1004 aaPredicted RBP12.56□□□□□ -0.4
AC011228.1-201ENST00000439027 PHF14O94880 888 aa12.56□□□□□ -0.4
AC011228.1-201ENST00000439027 PHKG2P15735 406 aa12.56□□□□□ -0.4
AC011228.1-201ENST00000439027 MORC1Q86VD1 984 aa12.56□□□□□ -0.4
AC011228.1-201ENST00000439027 UTRNP46939 3433 aa12.56□□□□□ -0.4
AC011228.1-201ENST00000439027 LOC102724428A0A0B4J2F2 783 aa12.55□□□□□ -0.4
AC011228.1-201ENST00000439027 SIK1P57059 783 aa12.55□□□□□ -0.4
AC011228.1-201ENST00000439027 SMIM5Q71RC9 77 aa12.55□□□□□ -0.4
AC011228.1-201ENST00000439027 ASAP1Q9ULH1 1129 aa12.55□□□□□ -0.4
AC011228.1-201ENST00000439027 NCAPD2Q15021 1401 aa12.54□□□□□ -0.4
AC011228.1-201ENST00000439027 CHD4Q14839 1912 aa12.54□□□□□ -0.4
AC011228.1-201ENST00000439027 ITGB4P16144 1822 aa12.53□□□□□ -0.4
AC011228.1-201ENST00000439027 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.53□□□□□ -0.4
AC011228.1-201ENST00000439027 GRIN3BO60391 1043 aa12.53□□□□□ -0.4
AC011228.1-201ENST00000439027 ATP6V1AP38606 617 aa12.53□□□□□ -0.4
AC011228.1-201ENST00000439027 PLEKHO1Q53GL0 409 aaPredicted RBP12.53□□□□□ -0.4
AC011228.1-201ENST00000439027 LINC00116Q8NCU8 138 aa12.53□□□□□ -0.4
AC011228.1-201ENST00000439027 SP7Q8TDD2 431 aaPredicted RBP12.53□□□□□ -0.4
AC011228.1-201ENST00000439027 CREBZFQ9NS37 354 aa12.53□□□□□ -0.4
AC011228.1-201ENST00000439027 KNSTRNQ9Y448 316 aa12.53□□□□□ -0.4
AC011228.1-201ENST00000439027 PKD1L3Q7Z443 1732 aa12.53□□□□□ -0.4
AC011228.1-201ENST00000439027 C5P01031 1676 aa12.52□□□□□ -0.4
AC011228.1-201ENST00000439027 TOGARAM1Q9Y4F4 1720 aa12.52□□□□□ -0.41
AC011228.1-201ENST00000439027 GNPATO15228 680 aa12.52□□□□□ -0.41
AC011228.1-201ENST00000439027 YBX3P16989 372 aaKnown RBP eCLIP12.52□□□□□ -0.41
AC011228.1-201ENST00000439027 ZNF530Q6P9A1 599 aaPredicted RBP12.52□□□□□ -0.41
AC011228.1-201ENST00000439027 AMIGO3Q86WK7 504 aa12.52□□□□□ -0.41
AC011228.1-201ENST00000439027 ATG3Q9NT62 314 aa12.52□□□□□ -0.41
AC011228.1-201ENST00000439027 FARP1Q9Y4F1 1045 aaPredicted RBP12.52□□□□□ -0.41
AC011228.1-201ENST00000439027 CD2APQ9Y5K6 639 aa12.52□□□□□ -0.41
AC011228.1-201ENST00000439027 HSP90AB1P08238 724 aaKnown RBP12.51□□□□□ -0.41
AC011228.1-201ENST00000439027 SSFA2P28290 1259 aa12.51□□□□□ -0.41
AC011228.1-201ENST00000439027 ITPK1Q13572 414 aa12.51□□□□□ -0.41
AC011228.1-201ENST00000439027 IGSF1Q8N6C5 1336 aa12.51□□□□□ -0.41
AC011228.1-201ENST00000439027 COL24A1Q17RW2 1714 aa12.51□□□□□ -0.41
AC011228.1-201ENST00000439027 ANKRD26Q9UPS8 1709 aa12.51□□□□□ -0.41
AC011228.1-201ENST00000439027 C19orf67A6NJJ6 358 aa12.5□□□□□ -0.41
AC011228.1-201ENST00000439027 ERVV-2B6SEH9 535 aa12.5□□□□□ -0.41
AC011228.1-201ENST00000439027 EVX2Q03828 476 aa12.5□□□□□ -0.41
AC011228.1-201ENST00000439027 AMOTQ4VCS5 1084 aa12.5□□□□□ -0.41
AC011228.1-201ENST00000439027 DCAF5Q96JK2 942 aa12.5□□□□□ -0.41
AC011228.1-201ENST00000439027 C4BP0C0L5 1744 aa12.5□□□□□ -0.41
AC011228.1-201ENST00000439027 TAF1LQ8IZX4 1826 aa12.5□□□□□ -0.41
AC011228.1-201ENST00000439027 CABP4P57796 275 aa12.49□□□□□ -0.41
AC011228.1-201ENST00000439027 C1orf141Q5JVX7 400 aa12.49□□□□□ -0.41
AC011228.1-201ENST00000439027 AEBP1Q8IUX7 1158 aa12.49□□□□□ -0.41
AC011228.1-201ENST00000439027 WWC3Q9ULE0 1092 aa12.49□□□□□ -0.41
AC011228.1-201ENST00000439027 MTHFSP49914 203 aa12.48□□□□□ -0.41
AC011228.1-201ENST00000439027 SULT6B1Q6IMI4 303 aa12.48□□□□□ -0.41
AC011228.1-201ENST00000439027 GOLGB1Q14789 3259 aaKnown RBP12.47□□□□□ -0.41
AC011228.1-201ENST00000439027 TRAPPC3LQ5T215 181 aa12.47□□□□□ -0.41
AC011228.1-201ENST00000439027 RTCBQ9Y3I0 505 aaKnown RBP12.47□□□□□ -0.41
AC011228.1-201ENST00000439027 SENP3-EIF4A1A0A087X0R7 540 aa12.46□□□□□ -0.41
AC011228.1-201ENST00000439027 PTCD1O75127 700 aaKnown RBP12.46□□□□□ -0.41
AC011228.1-201ENST00000439027 GIGYF1O75420 1035 aaPredicted RBP12.46□□□□□ -0.41
AC011228.1-201ENST00000439027 MMP10P09238 476 aa12.46□□□□□ -0.41
AC011228.1-201ENST00000439027 C1QTNF8P60827 252 aa12.46□□□□□ -0.41
AC011228.1-201ENST00000439027 SLC4A9Q96Q91 983 aa12.46□□□□□ -0.41
AC011228.1-201ENST00000439027 UBR3Q6ZT12 1888 aa12.46□□□□□ -0.42
AC011228.1-201ENST00000439027 PLEKHG2Q9H7P9 1386 aa12.45□□□□□ -0.42
AC011228.1-201ENST00000439027 IL13P35225 146 aa12.45□□□□□ -0.42
AC011228.1-201ENST00000439027 NFATC2IPQ8NCF5 419 aa12.45□□□□□ -0.42
AC011228.1-201ENST00000439027 KIF7Q2M1P5 1343 aa12.44□□□□□ -0.42
AC011228.1-201ENST00000439027 RFC4P35249 363 aa12.44□□□□□ -0.42
AC011228.1-201ENST00000439027 CNGB1Q14028 1251 aaPredicted RBP12.44□□□□□ -0.42
AC011228.1-201ENST00000439027 AMER1Q5JTC6 1135 aaPredicted RBP12.44□□□□□ -0.42
AC011228.1-201ENST00000439027 RC3H1Q5TC82 1133 aaKnown RBP12.44□□□□□ -0.42
AC011228.1-201ENST00000439027 NLGN1Q8N2Q7 840 aa12.44□□□□□ -0.42
AC011228.1-201ENST00000439027 ARHGEF1Q92888 912 aaKnown RBP12.44□□□□□ -0.42
AC011228.1-201ENST00000439027 CC2D1BQ5T0F9 858 aaKnown RBP12.43□□□□□ -0.42
AC011228.1-201ENST00000439027 KDM6AO15550 1401 aaPredicted RBP12.43□□□□□ -0.42
AC011228.1-201ENST00000439027 KDRP35968 1356 aa12.43□□□□□ -0.42
AC011228.1-201ENST00000439027 CNTNAP4Q9C0A0 1308 aa12.42□□□□□ -0.42
AC011228.1-201ENST00000439027 RPS6KA4O75676 772 aa12.42□□□□□ -0.42
AC011228.1-201ENST00000439027 HMOX1P09601 288 aa12.42□□□□□ -0.42
AC011228.1-201ENST00000439027 ZNF526Q8TF50 670 aaPredicted RBP12.41□□□□□ -0.42
AC011228.1-201ENST00000439027 PARP3Q9Y6F1 533 aa12.41□□□□□ -0.42
AC011228.1-201ENST00000439027 ATP10DQ9P241 1426 aa12.4□□□□□ -0.42
AC011228.1-201ENST00000439027 A0A0G2JLW4 131 aa12.4□□□□□ -0.42
AC011228.1-201ENST00000439027 GYS1P13807 737 aa12.4□□□□□ -0.42
AC011228.1-201ENST00000439027 CRKLP46109 303 aaKnown RBP12.4□□□□□ -0.42
AC011228.1-201ENST00000439027 AKAP4Q5JQC9 854 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms