RNA–Protein interactions for RNA: ENST00000438067.5

PTCH2-202, Transcript of patched 2, humanhuman

TSL 3

Gene PTCH2, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-202ENST00000438067 UBR3Q6ZT12 1888 aa23.87■■□□□ 1.41
PTCH2-202ENST00000438067 ERVV-2B6SEH9 535 aa23.85■■□□□ 1.41
PTCH2-202ENST00000438067 ADCY9O60503 1353 aa23.84■■□□□ 1.41
PTCH2-202ENST00000438067 PLEKHG2Q9H7P9 1386 aa23.84■■□□□ 1.41
PTCH2-202ENST00000438067 MMP10P09238 476 aa23.84■■□□□ 1.41
PTCH2-202ENST00000438067 SLC4A9Q96Q91 983 aa23.84■■□□□ 1.41
PTCH2-202ENST00000438067 TRAPPC3LQ5T215 181 aa23.83■■□□□ 1.41
PTCH2-202ENST00000438067 ZNF526Q8TF50 670 aaPredicted RBP23.83■■□□□ 1.41
PTCH2-202ENST00000438067 DCAF5Q96JK2 942 aa23.83■■□□□ 1.41
PTCH2-202ENST00000438067 RTCBQ9Y3I0 505 aaKnown RBP23.83■■□□□ 1.41
PTCH2-202ENST00000438067 CLSPNQ9HAW4 1339 aa23.83■■□□□ 1.4
PTCH2-202ENST00000438067 HSP90AB1P08238 724 aaKnown RBP23.82■■□□□ 1.4
PTCH2-202ENST00000438067 PLEKHO1Q53GL0 409 aaPredicted RBP23.82■■□□□ 1.4
PTCH2-202ENST00000438067 RBM42Q9BTD8 480 aaKnown RBP23.82■■□□□ 1.4
PTCH2-202ENST00000438067 PANK3Q9H999 370 aa23.82■■□□□ 1.4
PTCH2-202ENST00000438067 KDRP35968 1356 aa23.81■■□□□ 1.4
PTCH2-202ENST00000438067 RC3H1Q5TC82 1133 aaKnown RBP23.8■■□□□ 1.4
PTCH2-202ENST00000438067 NLGN1Q8N2Q7 840 aa23.8■■□□□ 1.4
PTCH2-202ENST00000438067 PCGF6Q9BYE7 350 aa23.8■■□□□ 1.4
PTCH2-202ENST00000438067 EIF4G2P78344 907 aaKnown RBP eCLIP23.79■■□□□ 1.4
PTCH2-202ENST00000438067 ARHGEF1Q92888 912 aaKnown RBP23.79■■□□□ 1.4
PTCH2-202ENST00000438067 HSPA5P11021 654 aaKnown RBP23.78■■□□□ 1.4
PTCH2-202ENST00000438067 CABP4P57796 275 aa23.78■■□□□ 1.4
PTCH2-202ENST00000438067 AMOTQ4VCS5 1084 aa23.78■■□□□ 1.4
PTCH2-202ENST00000438067 ZNF530Q6P9A1 599 aaPredicted RBP23.78■■□□□ 1.4
PTCH2-202ENST00000438067 ADRA2BP18089 450 aa23.77■■□□□ 1.4
PTCH2-202ENST00000438067 TGFB2P61812 414 aa23.77■■□□□ 1.4
PTCH2-202ENST00000438067 RPS6KA4O75676 772 aa23.76■■□□□ 1.39
PTCH2-202ENST00000438067 CNTNAP4Q9C0A0 1308 aa23.76■■□□□ 1.39
PTCH2-202ENST00000438067 A0A0G2JLW4 131 aa23.75■■□□□ 1.39
PTCH2-202ENST00000438067 MTHFSP49914 203 aa23.75■■□□□ 1.39
PTCH2-202ENST00000438067 KDM6AO15550 1401 aaPredicted RBP23.75■■□□□ 1.39
PTCH2-202ENST00000438067 GYS1P13807 737 aa23.74■■□□□ 1.39
PTCH2-202ENST00000438067 RFC4P35249 363 aa23.74■■□□□ 1.39
PTCH2-202ENST00000438067 MORC1Q86VD1 984 aa23.74■■□□□ 1.39
PTCH2-202ENST00000438067 AEBP1Q8IUX7 1158 aa23.74■■□□□ 1.39
PTCH2-202ENST00000438067 PXDNLA1KZ92 1463 aa23.74■■□□□ 1.39
PTCH2-202ENST00000438067 PTCD1O75127 700 aaKnown RBP23.72■■□□□ 1.39
PTCH2-202ENST00000438067 HSPA6P17066 643 aa23.72■■□□□ 1.39
PTCH2-202ENST00000438067 C1orf141Q5JVX7 400 aa23.72■■□□□ 1.39
PTCH2-202ENST00000438067 BCS1LQ9Y276 419 aa23.72■■□□□ 1.39
PTCH2-202ENST00000438067 NFATC2IPQ8NCF5 419 aa23.71■■□□□ 1.39
PTCH2-202ENST00000438067 CCDC87Q9NVE4 849 aa23.71■■□□□ 1.39
PTCH2-202ENST00000438067 KIF3CO14782 793 aa23.7■■□□□ 1.38
PTCH2-202ENST00000438067 SULT6B1Q6IMI4 303 aa23.7■■□□□ 1.38
PTCH2-202ENST00000438067 PARP3Q9Y6F1 533 aa23.7■■□□□ 1.38
PTCH2-202ENST00000438067 C10orf71Q711Q0 1435 aa23.69■■□□□ 1.38
PTCH2-202ENST00000438067 DPEP1P16444 411 aa23.69■■□□□ 1.38
PTCH2-202ENST00000438067 ZNF831Q5JPB2 1677 aa23.69■■□□□ 1.38
PTCH2-202ENST00000438067 CICQ96RK0 1608 aaPredicted RBP23.69■■□□□ 1.38
PTCH2-202ENST00000438067 CRKLP46109 303 aaKnown RBP23.68■■□□□ 1.38
PTCH2-202ENST00000438067 IL13P35225 146 aa23.67■■□□□ 1.38
PTCH2-202ENST00000438067 ARHGAP27Q6ZUM4 889 aa23.67■■□□□ 1.38
PTCH2-202ENST00000438067 KNSTRNQ9Y448 316 aa23.66■■□□□ 1.38
PTCH2-202ENST00000438067 FCHSD2O94868 740 aa23.65■■□□□ 1.38
PTCH2-202ENST00000438067 KCNA3P22001 575 aa23.65■■□□□ 1.38
PTCH2-202ENST00000438067 SRP68Q9UHB9 627 aaKnown RBP23.65■■□□□ 1.38
PTCH2-202ENST00000438067 IFFO2Q5TF58 517 aa23.64■■□□□ 1.37
PTCH2-202ENST00000438067 KIF13BQ9NQT8 1826 aa23.63■■□□□ 1.37
PTCH2-202ENST00000438067 COL5A3P25940 1745 aaPredicted RBP23.63■■□□□ 1.37
PTCH2-202ENST00000438067 FKBP8Q14318 412 aa23.63■■□□□ 1.37
PTCH2-202ENST00000438067 KIAA1551Q9HCM1 1747 aa23.63■■□□□ 1.37
PTCH2-202ENST00000438067 USP42Q9H9J4 1324 aaKnown RBP23.62■■□□□ 1.37
PTCH2-202ENST00000438067 INTS5Q6P9B9 1019 aaKnown RBP23.62■■□□□ 1.37
PTCH2-202ENST00000438067 C4AP0C0L4 1744 aa23.62■■□□□ 1.37
PTCH2-202ENST00000438067 N4BP2Q86UW6 1770 aaPredicted RBP23.61■■□□□ 1.37
PTCH2-202ENST00000438067 AKAP4Q5JQC9 854 aa23.61■■□□□ 1.37
PTCH2-202ENST00000438067 MYH14Q7Z406 1995 aaKnown RBP23.61■■□□□ 1.37
PTCH2-202ENST00000438067 DDR1Q08345 913 aa23.6■■□□□ 1.37
PTCH2-202ENST00000438067 AMER1Q5JTC6 1135 aaPredicted RBP23.6■■□□□ 1.37
PTCH2-202ENST00000438067 PIM2Q9P1W9 311 aa23.6■■□□□ 1.37
PTCH2-202ENST00000438067 SLC52A2Q9HAB3 445 aa23.59■■□□□ 1.37
PTCH2-202ENST00000438067 LGR6Q9HBX8 967 aa23.59■■□□□ 1.37
PTCH2-202ENST00000438067 TOMM70O94826 608 aa23.58■■□□□ 1.37
PTCH2-202ENST00000438067 DNAJC10Q8IXB1 793 aa23.58■■□□□ 1.37
PTCH2-202ENST00000438067 TM4SF1P30408 202 aa23.57■■□□□ 1.36
PTCH2-202ENST00000438067 C9orf131Q5VYM1 1079 aa23.57■■□□□ 1.36
PTCH2-202ENST00000438067 NMRK2Q9NPI5 230 aa23.57■■□□□ 1.36
PTCH2-202ENST00000438067 DALRD3Q5D0E6 543 aaKnown RBP23.56■■□□□ 1.36
PTCH2-202ENST00000438067 POLRMTO00411 1230 aaKnown RBP23.55■■□□□ 1.36
PTCH2-202ENST00000438067 ZPR1O75312 459 aa23.55■■□□□ 1.36
PTCH2-202ENST00000438067 CCER1Q8TC90 406 aaPredicted RBP23.55■■□□□ 1.36
PTCH2-202ENST00000438067 RNMTO43148 476 aaKnown RBP23.54■■□□□ 1.36
PTCH2-202ENST00000438067 HMOX1P09601 288 aa23.54■■□□□ 1.36
PTCH2-202ENST00000438067 CYP19A1P11511 503 aaPredicted RBP23.54■■□□□ 1.36
PTCH2-202ENST00000438067 CHRNA5P30532 468 aa23.54■■□□□ 1.36
PTCH2-202ENST00000438067 APLP1P51693 650 aa23.54■■□□□ 1.36
PTCH2-202ENST00000438067 SLC39A6Q13433 755 aa23.54■■□□□ 1.36
PTCH2-202ENST00000438067 USPL1Q5W0Q7 1092 aa23.54■■□□□ 1.36
PTCH2-202ENST00000438067 SOS1Q07889 1333 aaPredicted RBP23.53■■□□□ 1.36
PTCH2-202ENST00000438067 TJP1Q07157 1748 aa23.52■■□□□ 1.36
PTCH2-202ENST00000438067 MTHFSDQ2M296 383 aaKnown RBP23.51■■□□□ 1.35
PTCH2-202ENST00000438067 KIF7Q2M1P5 1343 aa23.5■■□□□ 1.35
PTCH2-202ENST00000438067 NFIXQ14938 502 aa23.49■■□□□ 1.35
PTCH2-202ENST00000438067 DNAJC5GQ8N7S2 189 aa23.49■■□□□ 1.35
PTCH2-202ENST00000438067 RNF181Q9P0P0 153 aa23.49■■□□□ 1.35
PTCH2-202ENST00000438067 NARFQ9UHQ1 456 aa23.49■■□□□ 1.35
PTCH2-202ENST00000438067 SCN11AQ9UI33 1791 aa23.49■■□□□ 1.35
PTCH2-202ENST00000438067 BRCA1P38398 1863 aaKnown RBP23.49■■□□□ 1.35
PTCH2-202ENST00000438067 PER1O15534 1290 aaPredicted RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms