RNA–Protein interactions for RNA: ENST00000436976.1

HMGN1P19-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 19, humanhuman

BASIC

Gene HMGN1P19, Length 333 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P19-201ENST00000436976 HSPA1BP0DMV9 641 aaKnown RBP23.27■■□□□ 1.32
HMGN1P19-201ENST00000436976 DPEP1P16444 411 aa23.27■■□□□ 1.32
HMGN1P19-201ENST00000436976 SIK1P57059 783 aa23.27■■□□□ 1.32
HMGN1P19-201ENST00000436976 ITPK1Q13572 414 aa23.27■■□□□ 1.32
HMGN1P19-201ENST00000436976 RRS1Q15050 365 aaKnown RBP23.27■■□□□ 1.32
HMGN1P19-201ENST00000436976 RRAGCQ9HB90 399 aa23.26■■□□□ 1.31
HMGN1P19-201ENST00000436976 CCDC88AQ3V6T2 1871 aa23.25■■□□□ 1.31
HMGN1P19-201ENST00000436976 KCNA3P22001 575 aa23.24■■□□□ 1.31
HMGN1P19-201ENST00000436976 COL5A3P25940 1745 aaPredicted RBP23.24■■□□□ 1.31
HMGN1P19-201ENST00000436976 MYH14Q7Z406 1995 aaKnown RBP23.23■■□□□ 1.31
HMGN1P19-201ENST00000436976 SLC34A2O95436 690 aa23.23■■□□□ 1.31
HMGN1P19-201ENST00000436976 KDM2BQ8NHM5 1336 aa23.23■■□□□ 1.31
HMGN1P19-201ENST00000436976 SMG6Q86US8 1419 aaKnown RBP23.23■■□□□ 1.31
HMGN1P19-201ENST00000436976 SMC1BQ8NDV3 1235 aa23.2■■□□□ 1.3
HMGN1P19-201ENST00000436976 ASAP1Q9ULH1 1129 aa23.2■■□□□ 1.3
HMGN1P19-201ENST00000436976 NKX1-1Q15270 411 aaPredicted RBP23.19■■□□□ 1.3
HMGN1P19-201ENST00000436976 HSP90AB2PQ58FF8 381 aa23.19■■□□□ 1.3
HMGN1P19-201ENST00000436976 SIN3AQ96ST3 1273 aa23.19■■□□□ 1.3
HMGN1P19-201ENST00000436976 RNF181Q9P0P0 153 aa23.19■■□□□ 1.3
HMGN1P19-201ENST00000436976 ZNF831Q5JPB2 1677 aa23.19■■□□□ 1.3
HMGN1P19-201ENST00000436976 ATP6V1AP38606 617 aa23.18■■□□□ 1.3
HMGN1P19-201ENST00000436976 DCAF5Q96JK2 942 aa23.18■■□□□ 1.3
HMGN1P19-201ENST00000436976 CCDC87Q9NVE4 849 aa23.18■■□□□ 1.3
HMGN1P19-201ENST00000436976 KIF20BQ96Q89 1820 aa23.17■■□□□ 1.3
HMGN1P19-201ENST00000436976 INSRP06213 1382 aa23.17■■□□□ 1.3
HMGN1P19-201ENST00000436976 TMF1P82094 1093 aa23.17■■□□□ 1.3
HMGN1P19-201ENST00000436976 NLGN1Q8N2Q7 840 aa23.17■■□□□ 1.3
HMGN1P19-201ENST00000436976 PUS7Q96PZ0 661 aaKnown RBP23.16■■□□□ 1.3
HMGN1P19-201ENST00000436976 GYS1P13807 737 aa23.15■■□□□ 1.3
HMGN1P19-201ENST00000436976 TIAM2Q8IVF5 1701 aa23.15■■□□□ 1.3
HMGN1P19-201ENST00000436976 NCAPD2Q15021 1401 aa23.15■■□□□ 1.3
HMGN1P19-201ENST00000436976 KDRP35968 1356 aa23.14■■□□□ 1.3
HMGN1P19-201ENST00000436976 TRAPPC3LQ5T215 181 aa23.14■■□□□ 1.29
HMGN1P19-201ENST00000436976 ARHGEF1Q92888 912 aaKnown RBP23.13■■□□□ 1.29
HMGN1P19-201ENST00000436976 CARD11Q9BXL7 1154 aa23.13■■□□□ 1.29
HMGN1P19-201ENST00000436976 PIM2Q9P1W9 311 aa23.13■■□□□ 1.29
HMGN1P19-201ENST00000436976 RTCBQ9Y3I0 505 aaKnown RBP23.13■■□□□ 1.29
HMGN1P19-201ENST00000436976 SLC4A9Q96Q91 983 aa23.12■■□□□ 1.29
HMGN1P19-201ENST00000436976 GGNBP2Q9H3C7 697 aa23.12■■□□□ 1.29
HMGN1P19-201ENST00000436976 ATG3Q9NT62 314 aa23.12■■□□□ 1.29
HMGN1P19-201ENST00000436976 TMOD3Q9NYL9 352 aa23.12■■□□□ 1.29
HMGN1P19-201ENST00000436976 FLT4P35916 1363 aa23.12■■□□□ 1.29
HMGN1P19-201ENST00000436976 FYB1O15117 783 aa23.11■■□□□ 1.29
HMGN1P19-201ENST00000436976 PARP3Q9Y6F1 533 aa23.11■■□□□ 1.29
HMGN1P19-201ENST00000436976 DALRD3Q5D0E6 543 aaKnown RBP23.1■■□□□ 1.29
HMGN1P19-201ENST00000436976 KDM6AO15550 1401 aaPredicted RBP23.09■■□□□ 1.29
HMGN1P19-201ENST00000436976 ANKRD26Q9UPS8 1709 aa23.09■■□□□ 1.29
HMGN1P19-201ENST00000436976 AFDNP55196 1824 aaKnown RBP23.08■■□□□ 1.29
HMGN1P19-201ENST00000436976 DLEC1Q9Y238 1755 aa23.08■■□□□ 1.29
HMGN1P19-201ENST00000436976 ADRA2BP18089 450 aa23.07■■□□□ 1.28
HMGN1P19-201ENST00000436976 CHRNA5P30532 468 aa23.07■■□□□ 1.28
HMGN1P19-201ENST00000436976 NEUROD1Q13562 356 aa23.07■■□□□ 1.28
HMGN1P19-201ENST00000436976 KIF24Q5T7B8 1368 aa23.06■■□□□ 1.28
HMGN1P19-201ENST00000436976 RASSF7Q02833 373 aa23.06■■□□□ 1.28
HMGN1P19-201ENST00000436976 ADAMTS7Q9UKP4 1686 aa23.06■■□□□ 1.28
HMGN1P19-201ENST00000436976 RFC4P35249 363 aa23.05■■□□□ 1.28
HMGN1P19-201ENST00000436976 RC3H1Q5TC82 1133 aaKnown RBP23.05■■□□□ 1.28
HMGN1P19-201ENST00000436976 TESK2Q96S53 571 aa23.05■■□□□ 1.28
HMGN1P19-201ENST00000436976 SPG7Q9UQ90 795 aa23.05■■□□□ 1.28
HMGN1P19-201ENST00000436976 DICER1Q9UPY3 1922 aaKnown RBP23.04■■□□□ 1.28
HMGN1P19-201ENST00000436976 VEGFAP15692 232 aaPredicted RBP23.04■■□□□ 1.28
HMGN1P19-201ENST00000436976 DDR1Q08345 913 aa23.04■■□□□ 1.28
HMGN1P19-201ENST00000436976 CNTNAP4Q9C0A0 1308 aa23.04■■□□□ 1.28
HMGN1P19-201ENST00000436976 ZC3H4Q9UPT8 1303 aaKnown RBP23.04■■□□□ 1.28
HMGN1P19-201ENST00000436976 RPS6KA4O75676 772 aa23.03■■□□□ 1.28
HMGN1P19-201ENST00000436976 PHKG2P15735 406 aa23.03■■□□□ 1.28
HMGN1P19-201ENST00000436976 GLTPD2A6NH11 291 aa23.02■■□□□ 1.28
HMGN1P19-201ENST00000436976 TONSLQ96HA7 1378 aa23.01■■□□□ 1.27
HMGN1P19-201ENST00000436976 EMILIN1Q9Y6C2 1016 aa23.01■■□□□ 1.27
HMGN1P19-201ENST00000436976 TJP1Q07157 1748 aa23■■□□□ 1.27
HMGN1P19-201ENST00000436976 POTECB2RU33 542 aa23■■□□□ 1.27
HMGN1P19-201ENST00000436976 FOXN1O15353 648 aa23■■□□□ 1.27
HMGN1P19-201ENST00000436976 FKBP8Q14318 412 aa23■■□□□ 1.27
HMGN1P19-201ENST00000436976 IFNL2Q8IZJ0 200 aa23■■□□□ 1.27
HMGN1P19-201ENST00000436976 RBM42Q9BTD8 480 aaKnown RBP23■■□□□ 1.27
HMGN1P19-201ENST00000436976 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23■■□□□ 1.27
HMGN1P19-201ENST00000436976 SRP68Q9UHB9 627 aaKnown RBP23■■□□□ 1.27
HMGN1P19-201ENST00000436976 VIRMAQ69YN4 1812 aaKnown RBP23■■□□□ 1.27
HMGN1P19-201ENST00000436976 MKRN1Q9UHC7 482 aaKnown RBP22.98■■□□□ 1.27
HMGN1P19-201ENST00000436976 NRXN2Q9P2S2 1712 aa22.98■■□□□ 1.27
HMGN1P19-201ENST00000436976 LMNB1P20700 586 aa22.97■■□□□ 1.27
HMGN1P19-201ENST00000436976 EYA1Q99502 592 aa22.97■■□□□ 1.27
HMGN1P19-201ENST00000436976 USP42Q9H9J4 1324 aaKnown RBP22.96■■□□□ 1.27
HMGN1P19-201ENST00000436976 PRDM10Q9NQV6 1147 aa22.95■■□□□ 1.26
HMGN1P19-201ENST00000436976 FER1L6Q2WGJ9 1857 aa22.94■■□□□ 1.26
HMGN1P19-201ENST00000436976 ST20-MTHFSA0A0A6YYL1 179 aa22.94■■□□□ 1.26
HMGN1P19-201ENST00000436976 POLRMTO00411 1230 aaKnown RBP22.94■■□□□ 1.26
HMGN1P19-201ENST00000436976 CREBZFQ9NS37 354 aa22.94■■□□□ 1.26
HMGN1P19-201ENST00000436976 TM4SF1P30408 202 aa22.92■■□□□ 1.26
HMGN1P19-201ENST00000436976 CRKLP46109 303 aaKnown RBP22.91■■□□□ 1.26
HMGN1P19-201ENST00000436976 FAM161AQ3B820 660 aa22.91■■□□□ 1.26
HMGN1P19-201ENST00000436976 ERVV-2B6SEH9 535 aa22.9■■□□□ 1.26
HMGN1P19-201ENST00000436976 NFKBIEO00221 500 aa22.9■■□□□ 1.26
HMGN1P19-201ENST00000436976 CNTNAP1P78357 1384 aa22.89■■□□□ 1.26
HMGN1P19-201ENST00000436976 PPM1GO15355 546 aaPredicted RBP22.89■■□□□ 1.25
HMGN1P19-201ENST00000436976 ANKRD31Q8N7Z5 1873 aa22.89■■□□□ 1.25
HMGN1P19-201ENST00000436976 WASHC2AQ641Q2 1341 aa22.88■■□□□ 1.25
HMGN1P19-201ENST00000436976 POTEIP0CG38 1075 aa22.88■■□□□ 1.25
HMGN1P19-201ENST00000436976 POTEJP0CG39 1038 aa22.88■■□□□ 1.25
HMGN1P19-201ENST00000436976 CACNA1SQ13698 1873 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms