RNA–Protein interactions for RNA: ENST00000436963.1

LINC00441-202, humanhuman

TSL 3

Gene LINC00441, Length 220 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00441-202ENST00000436963 ITGAEP38570 1179 aa16.54■□□□□ 0.24
LINC00441-202ENST00000436963 DICER1Q9UPY3 1922 aaKnown RBP16.54■□□□□ 0.24
LINC00441-202ENST00000436963 LMNB1P20700 586 aa16.53■□□□□ 0.24
LINC00441-202ENST00000436963 NFAT5O94916 1531 aa16.53■□□□□ 0.24
LINC00441-202ENST00000436963 SSFA2P28290 1259 aa16.52■□□□□ 0.24
LINC00441-202ENST00000436963 SLC17A8Q8NDX2 589 aa16.52■□□□□ 0.24
LINC00441-202ENST00000436963 CCDC87Q9NVE4 849 aa16.51■□□□□ 0.23
LINC00441-202ENST00000436963 COL6A3P12111 3177 aa16.51■□□□□ 0.23
LINC00441-202ENST00000436963 ITGBL1O95965 494 aaPredicted RBP16.5■□□□□ 0.23
LINC00441-202ENST00000436963 HMGB2P26583 209 aaKnown RBP16.5■□□□□ 0.23
LINC00441-202ENST00000436963 NBPF15Q8N660 670 aa16.5■□□□□ 0.23
LINC00441-202ENST00000436963 LTN1O94822 1766 aa16.5■□□□□ 0.23
LINC00441-202ENST00000436963 DPY19L2Q6NUT2 758 aa16.48■□□□□ 0.23
LINC00441-202ENST00000436963 KCNH5Q8NCM2 988 aa16.48■□□□□ 0.23
LINC00441-202ENST00000436963 SLC4A1APQ9BWU0 796 aaKnown RBP16.48■□□□□ 0.23
LINC00441-202ENST00000436963 PALLDQ8WX93 1383 aa16.48■□□□□ 0.23
LINC00441-202ENST00000436963 MKI67P46013 3256 aaKnown RBP16.46■□□□□ 0.23
LINC00441-202ENST00000436963 MAP2P11137 1827 aaKnown RBP16.46■□□□□ 0.23
LINC00441-202ENST00000436963 SCN4AP35499 1836 aa16.46■□□□□ 0.23
LINC00441-202ENST00000436963 LDHDQ86WU2 507 aa16.45■□□□□ 0.22
LINC00441-202ENST00000436963 GPR101Q96P66 508 aaPredicted RBP16.45■□□□□ 0.22
LINC00441-202ENST00000436963 ABT1Q9ULW3 272 aaKnown RBP16.45■□□□□ 0.22
LINC00441-202ENST00000436963 ITGB4P16144 1822 aa16.45■□□□□ 0.22
LINC00441-202ENST00000436963 CAPNS2Q96L46 248 aa16.44■□□□□ 0.22
LINC00441-202ENST00000436963 CHRNA5P30532 468 aa16.43■□□□□ 0.22
LINC00441-202ENST00000436963 GRM1Q13255 1194 aa16.43■□□□□ 0.22
LINC00441-202ENST00000436963 ADAMTSL1Q8N6G6 1762 aa16.43■□□□□ 0.22
LINC00441-202ENST00000436963 CYP4F22Q6NT55 531 aa16.41■□□□□ 0.22
LINC00441-202ENST00000436963 PAXIP1Q6ZW49 1069 aaPredicted RBP16.41■□□□□ 0.22
LINC00441-202ENST00000436963 NLGN1Q8N2Q7 840 aa16.41■□□□□ 0.22
LINC00441-202ENST00000436963 FAM208AQ9UK61 1670 aaKnown RBP16.4■□□□□ 0.22
LINC00441-202ENST00000436963 GNPATO15228 680 aa16.4■□□□□ 0.22
LINC00441-202ENST00000436963 TMF1P82094 1093 aa16.4■□□□□ 0.22
LINC00441-202ENST00000436963 ANKRD24Q8TF21 1146 aa16.4■□□□□ 0.22
LINC00441-202ENST00000436963 DLEC1Q9Y238 1755 aa16.39■□□□□ 0.21
LINC00441-202ENST00000436963 CA12O43570 354 aa16.39■□□□□ 0.21
LINC00441-202ENST00000436963 ECE1P42892 770 aa16.39■□□□□ 0.21
LINC00441-202ENST00000436963 LINC00116Q8NCU8 138 aa16.39■□□□□ 0.21
LINC00441-202ENST00000436963 PARP3Q9Y6F1 533 aa16.39■□□□□ 0.21
LINC00441-202ENST00000436963 RGPD2P0DJD1 1756 aa16.38■□□□□ 0.21
LINC00441-202ENST00000436963 TRPM7Q96QT4 1865 aa16.38■□□□□ 0.21
LINC00441-202ENST00000436963 AOC2O75106 756 aa16.38■□□□□ 0.21
LINC00441-202ENST00000436963 DDNO94850 711 aaPredicted RBP16.38■□□□□ 0.21
LINC00441-202ENST00000436963 NFKBIEO00221 500 aa16.36■□□□□ 0.21
LINC00441-202ENST00000436963 ZCRB1Q8TBF4 217 aaKnown RBP16.35■□□□□ 0.21
LINC00441-202ENST00000436963 TAF1DQ9H5J8 278 aaPredicted RBP16.35■□□□□ 0.21
LINC00441-202ENST00000436963 FER1L6Q2WGJ9 1857 aa16.35■□□□□ 0.21
LINC00441-202ENST00000436963 MEGF6O75095 1541 aa16.35■□□□□ 0.21
LINC00441-202ENST00000436963 MAP2K2P36507 400 aa16.34■□□□□ 0.21
LINC00441-202ENST00000436963 GYS1P13807 737 aa16.33■□□□□ 0.2
LINC00441-202ENST00000436963 ERFEQ4G0M1 354 aa16.33■□□□□ 0.2
LINC00441-202ENST00000436963 EAPPQ56P03 285 aaPredicted RBP16.33■□□□□ 0.2
LINC00441-202ENST00000436963 MPRIPQ6WCQ1 1025 aa16.33■□□□□ 0.2
LINC00441-202ENST00000436963 IQCA1LA6NCM1 817 aa16.32■□□□□ 0.2
LINC00441-202ENST00000436963 CNTROBQ8N137 903 aa16.32■□□□□ 0.2
LINC00441-202ENST00000436963 CLEC11AQ9Y240 323 aa16.32■□□□□ 0.2
LINC00441-202ENST00000436963 SRPK2P78362 688 aaKnown RBP16.31■□□□□ 0.2
LINC00441-202ENST00000436963 NBPF1Q3BBV0 1214 aa16.31■□□□□ 0.2
LINC00441-202ENST00000436963 MAP1SQ66K74 1059 aaPredicted RBP16.31■□□□□ 0.2
LINC00441-202ENST00000436963 CABP1Q9NZU7 370 aa16.31■□□□□ 0.2
LINC00441-202ENST00000436963 TRIOBPQ9H2D6 2365 aa16.3■□□□□ 0.2
LINC00441-202ENST00000436963 TTC21BQ7Z4L5 1316 aa16.3■□□□□ 0.2
LINC00441-202ENST00000436963 SMARCC1Q92922 1105 aaPredicted RBP16.3■□□□□ 0.2
LINC00441-202ENST00000436963 CABP2Q9NPB3 220 aa16.3■□□□□ 0.2
LINC00441-202ENST00000436963 TRAPPC3LQ5T215 181 aa16.29■□□□□ 0.2
LINC00441-202ENST00000436963 PPARGC1BQ86YN6 1023 aaKnown RBP16.29■□□□□ 0.2
LINC00441-202ENST00000436963 UNC80Q8N2C7 3258 aa16.29■□□□□ 0.2
LINC00441-202ENST00000436963 MNX1P50219 401 aaPredicted RBP16.28■□□□□ 0.2
LINC00441-202ENST00000436963 BRPF1P55201 1214 aaPredicted RBP16.28■□□□□ 0.2
LINC00441-202ENST00000436963 ITPK1Q13572 414 aa16.28■□□□□ 0.2
LINC00441-202ENST00000436963 DDX21Q9NR30 783 aaKnown RBP eCLIP16.28■□□□□ 0.2
LINC00441-202ENST00000436963 AFDNP55196 1824 aaKnown RBP16.27■□□□□ 0.2
LINC00441-202ENST00000436963 LOC102724428A0A0B4J2F2 783 aa16.27■□□□□ 0.2
LINC00441-202ENST00000436963 SIK1P57059 783 aa16.27■□□□□ 0.2
LINC00441-202ENST00000436963 MPNDQ8N594 471 aa16.27■□□□□ 0.2
LINC00441-202ENST00000436963 FMR1Q06787 632 aaKnown RBP eCLIP16.26■□□□□ 0.19
LINC00441-202ENST00000436963 ARHGEF1Q92888 912 aaKnown RBP16.26■□□□□ 0.19
LINC00441-202ENST00000436963 L3MBTL3Q96JM7 780 aaPredicted RBP16.26■□□□□ 0.19
LINC00441-202ENST00000436963 DDR1Q08345 913 aa16.25■□□□□ 0.19
LINC00441-202ENST00000436963 COLQQ9Y215 455 aaPredicted RBP16.25■□□□□ 0.19
LINC00441-202ENST00000436963 CIAPIN1Q6FI81 312 aa16.24■□□□□ 0.19
LINC00441-202ENST00000436963 HPS5Q9UPZ3 1129 aa16.24■□□□□ 0.19
LINC00441-202ENST00000436963 RTCBQ9Y3I0 505 aaKnown RBP16.24■□□□□ 0.19
LINC00441-202ENST00000436963 LTV1Q96GA3 475 aaPredicted RBP16.23■□□□□ 0.19
LINC00441-202ENST00000436963 TLL2Q9Y6L7 1015 aa16.23■□□□□ 0.19
LINC00441-202ENST00000436963 COL5A3P25940 1745 aaPredicted RBP16.22■□□□□ 0.19
LINC00441-202ENST00000436963 TTC21AQ8NDW8 1320 aa16.22■□□□□ 0.19
LINC00441-202ENST00000436963 TTLL6Q8N841 843 aa16.22■□□□□ 0.19
LINC00441-202ENST00000436963 SCN11AQ9UI33 1791 aa16.21■□□□□ 0.19
LINC00441-202ENST00000436963 MYH14Q7Z406 1995 aaKnown RBP16.21■□□□□ 0.19
LINC00441-202ENST00000436963 RFC4P35249 363 aa16.21■□□□□ 0.19
LINC00441-202ENST00000436963 ATP6V1AP38606 617 aa16.21■□□□□ 0.19
LINC00441-202ENST00000436963 CST9Q5W186 159 aa16.21■□□□□ 0.19
LINC00441-202ENST00000436963 AKAP11Q9UKA4 1901 aa16.2■□□□□ 0.18
LINC00441-202ENST00000436963 EPHX2P34913 555 aa16.2■□□□□ 0.18
LINC00441-202ENST00000436963 PIGBQ92521 554 aa16.2■□□□□ 0.18
LINC00441-202ENST00000436963 HACL1Q9UJ83 578 aa16.2■□□□□ 0.18
LINC00441-202ENST00000436963 CACNA1SQ13698 1873 aa16.19■□□□□ 0.18
LINC00441-202ENST00000436963 BRCA2P51587 3418 aa16.18■□□□□ 0.18
LINC00441-202ENST00000436963 ADRA2BP18089 450 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms