RNA–Protein interactions for RNA: ENST00000436654.1

CTDSPL-205, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-205ENST00000436654 DCAF5Q96JK2 942 aa12.14□□□□□ -0.47
CTDSPL-205ENST00000436654 RBM42Q9BTD8 480 aaKnown RBP12.14□□□□□ -0.47
CTDSPL-205ENST00000436654 C5P01031 1676 aa12.13□□□□□ -0.47
CTDSPL-205ENST00000436654 ERVV-2B6SEH9 535 aa12.13□□□□□ -0.47
CTDSPL-205ENST00000436654 HSP90AB1P08238 724 aaKnown RBP12.13□□□□□ -0.47
CTDSPL-205ENST00000436654 YBX3P16989 372 aaKnown RBP eCLIP12.13□□□□□ -0.474e-7■■■■□ 24.1
CTDSPL-205ENST00000436654 SSFA2P28290 1259 aa12.13□□□□□ -0.47
CTDSPL-205ENST00000436654 CABP4P57796 275 aa12.13□□□□□ -0.47
CTDSPL-205ENST00000436654 AMOTQ4VCS5 1084 aa12.13□□□□□ -0.47
CTDSPL-205ENST00000436654 AMER1Q5JTC6 1135 aaPredicted RBP12.13□□□□□ -0.47
CTDSPL-205ENST00000436654 C4BP0C0L5 1744 aa12.12□□□□□ -0.47
CTDSPL-205ENST00000436654 IL13P35225 146 aa12.12□□□□□ -0.47
CTDSPL-205ENST00000436654 CNGB1Q14028 1251 aaPredicted RBP12.12□□□□□ -0.47
CTDSPL-205ENST00000436654 C1orf141Q5JVX7 400 aa12.12□□□□□ -0.47
CTDSPL-205ENST00000436654 SLC4A9Q96Q91 983 aa12.12□□□□□ -0.47
CTDSPL-205ENST00000436654 PLEKHG2Q9H7P9 1386 aa12.12□□□□□ -0.47
CTDSPL-205ENST00000436654 KDM6AO15550 1401 aaPredicted RBP12.11□□□□□ -0.47
CTDSPL-205ENST00000436654 MAP2P11137 1827 aaKnown RBP12.11□□□□□ -0.47
CTDSPL-205ENST00000436654 MTHFSP49914 203 aa12.11□□□□□ -0.47
CTDSPL-205ENST00000436654 CC2D1BQ5T0F9 858 aaKnown RBP12.11□□□□□ -0.47
CTDSPL-205ENST00000436654 WWC3Q9ULE0 1092 aa12.11□□□□□ -0.47
CTDSPL-205ENST00000436654 CD2APQ9Y5K6 639 aa12.11□□□□□ -0.47
CTDSPL-205ENST00000436654 KDRP35968 1356 aa12.1□□□□□ -0.47
CTDSPL-205ENST00000436654 PTCD1O75127 700 aaKnown RBP12.1□□□□□ -0.47
CTDSPL-205ENST00000436654 COL24A1Q17RW2 1714 aa12.1□□□□□ -0.47
CTDSPL-205ENST00000436654 GRIN3BO60391 1043 aa12.09□□□□□ -0.47
CTDSPL-205ENST00000436654 HMOX1P09601 288 aa12.09□□□□□ -0.47
CTDSPL-205ENST00000436654 NFATC2IPQ8NCF5 419 aa12.09□□□□□ -0.47
CTDSPL-205ENST00000436654 RTCBQ9Y3I0 505 aaKnown RBP12.09□□□□□ -0.47
CTDSPL-205ENST00000436654 ITGB4P16144 1822 aa12.09□□□□□ -0.47
CTDSPL-205ENST00000436654 PER1O15534 1290 aaPredicted RBP12.08□□□□□ -0.48
CTDSPL-205ENST00000436654 TRAPPC3LQ5T215 181 aa12.08□□□□□ -0.48
CTDSPL-205ENST00000436654 MMP10P09238 476 aa12.07□□□□□ -0.48
CTDSPL-205ENST00000436654 AKAP4Q5JQC9 854 aa12.06□□□□□ -0.48
CTDSPL-205ENST00000436654 RC3H1Q5TC82 1133 aaKnown RBP12.06□□□□□ -0.48
CTDSPL-205ENST00000436654 ARHGEF1Q92888 912 aaKnown RBP12.06□□□□□ -0.48
CTDSPL-205ENST00000436654 LGR6Q9HBX8 967 aa12.06□□□□□ -0.48
CTDSPL-205ENST00000436654 TAF1LQ8IZX4 1826 aa12.06□□□□□ -0.48
CTDSPL-205ENST00000436654 CNTNAP4Q9C0A0 1308 aa12.06□□□□□ -0.48
CTDSPL-205ENST00000436654 DIAPH1O60610 1272 aaKnown RBP12.05□□□□□ -0.48
CTDSPL-205ENST00000436654 RPS6KA4O75676 772 aa12.05□□□□□ -0.48
CTDSPL-205ENST00000436654 ADRA2BP18089 450 aa12.04□□□□□ -0.48
CTDSPL-205ENST00000436654 RFC4P35249 363 aa12.04□□□□□ -0.48
CTDSPL-205ENST00000436654 CRKLP46109 303 aaKnown RBP12.04□□□□□ -0.48
CTDSPL-205ENST00000436654 GOLGB1Q14789 3259 aaKnown RBP12.04□□□□□ -0.48
CTDSPL-205ENST00000436654 UBR3Q6ZT12 1888 aa12.04□□□□□ -0.48
CTDSPL-205ENST00000436654 U2SURPO15042 1029 aaKnown RBP12.03□□□□□ -0.48
CTDSPL-205ENST00000436654 RNMTO43148 476 aaKnown RBP12.03□□□□□ -0.48
CTDSPL-205ENST00000436654 GYS1P13807 737 aa12.03□□□□□ -0.48
CTDSPL-205ENST00000436654 SLC39A6Q13433 755 aa12.03□□□□□ -0.48
CTDSPL-205ENST00000436654 MTHFSDQ2M296 383 aaKnown RBP12.03□□□□□ -0.48
CTDSPL-205ENST00000436654 NLGN1Q8N2Q7 840 aa12.03□□□□□ -0.48
CTDSPL-205ENST00000436654 SLC52A2Q9HAB3 445 aa12.03□□□□□ -0.48
CTDSPL-205ENST00000436654 SRP68Q9UHB9 627 aaKnown RBP12.03□□□□□ -0.48
CTDSPL-205ENST00000436654 DNAJC10Q8IXB1 793 aa12.02□□□□□ -0.49
CTDSPL-205ENST00000436654 INTS5Q6P9B9 1019 aaKnown RBP12.01□□□□□ -0.49
CTDSPL-205ENST00000436654 PARP3Q9Y6F1 533 aa12.01□□□□□ -0.49
CTDSPL-205ENST00000436654 ATP10DQ9P241 1426 aa12.01□□□□□ -0.49
CTDSPL-205ENST00000436654 A0A0G2JLW4 131 aa12□□□□□ -0.49
CTDSPL-205ENST00000436654 HSPA6P17066 643 aa12□□□□□ -0.49
CTDSPL-205ENST00000436654 ZNF526Q8TF50 670 aaPredicted RBP12□□□□□ -0.49
CTDSPL-205ENST00000436654 CCDC87Q9NVE4 849 aa12□□□□□ -0.49
CTDSPL-205ENST00000436654 NPC1L1Q9UHC9 1359 aa12□□□□□ -0.49
CTDSPL-205ENST00000436654 CICQ96RK0 1608 aaPredicted RBP12□□□□□ -0.49
CTDSPL-205ENST00000436654 FKBP8Q14318 412 aa11.99□□□□□ -0.49
CTDSPL-205ENST00000436654 BCS1LQ9Y276 419 aa11.99□□□□□ -0.49
CTDSPL-205ENST00000436654 C10orf71Q711Q0 1435 aa11.99□□□□□ -0.49
CTDSPL-205ENST00000436654 PXDNLA1KZ92 1463 aa11.99□□□□□ -0.49
CTDSPL-205ENST00000436654 COL3A1P02461 1466 aaPredicted RBP11.98□□□□□ -0.49
CTDSPL-205ENST00000436654 USP42Q9H9J4 1324 aaKnown RBP11.98□□□□□ -0.49
CTDSPL-205ENST00000436654 CYP19A1P11511 503 aaPredicted RBP11.98□□□□□ -0.49
CTDSPL-205ENST00000436654 DPEP1P16444 411 aa11.98□□□□□ -0.49
CTDSPL-205ENST00000436654 TGFB2P61812 414 aa11.98□□□□□ -0.49
CTDSPL-205ENST00000436654 ZNF831Q5JPB2 1677 aa11.97□□□□□ -0.49
CTDSPL-205ENST00000436654 MRC1P22897 1456 aa11.97□□□□□ -0.49
CTDSPL-205ENST00000436654 DDR1Q08345 913 aa11.97□□□□□ -0.49
CTDSPL-205ENST00000436654 USPL1Q5W0Q7 1092 aa11.97□□□□□ -0.49
CTDSPL-205ENST00000436654 GPBP1L1Q9HC44 474 aaPredicted RBP11.97□□□□□ -0.49
CTDSPL-205ENST00000436654 SOS1Q07889 1333 aaPredicted RBP11.96□□□□□ -0.49
CTDSPL-205ENST00000436654 ZPR1O75312 459 aa11.96□□□□□ -0.49
CTDSPL-205ENST00000436654 FCHSD2O94868 740 aa11.96□□□□□ -0.49
CTDSPL-205ENST00000436654 IL17REQ8NFR9 667 aa11.96□□□□□ -0.49
CTDSPL-205ENST00000436654 CFAP53Q96M91 514 aa11.96□□□□□ -0.49
CTDSPL-205ENST00000436654 ZBTB1Q9Y2K1 713 aa11.96□□□□□ -0.49
CTDSPL-205ENST00000436654 COL5A3P25940 1745 aaPredicted RBP11.96□□□□□ -0.49
CTDSPL-205ENST00000436654 ADCY9O60503 1353 aa11.95□□□□□ -0.5
CTDSPL-205ENST00000436654 TJP1Q07157 1748 aa11.95□□□□□ -0.5
CTDSPL-205ENST00000436654 GNAT3A8MTJ3 354 aa11.95□□□□□ -0.5
CTDSPL-205ENST00000436654 CANXP27824 592 aaKnown RBP11.95□□□□□ -0.5
CTDSPL-205ENST00000436654 PRKAR2BP31323 418 aa11.95□□□□□ -0.5
CTDSPL-205ENST00000436654 TEFQ10587 303 aa11.95□□□□□ -0.5
CTDSPL-205ENST00000436654 ARHGAP27Q6ZUM4 889 aa11.95□□□□□ -0.5
CTDSPL-205ENST00000436654 TTC5Q8N0Z6 440 aa11.95□□□□□ -0.5
CTDSPL-205ENST00000436654 GAS2L2Q8NHY3 880 aa11.95□□□□□ -0.5
CTDSPL-205ENST00000436654 PHACTR3Q96KR7 559 aa11.95□□□□□ -0.5
CTDSPL-205ENST00000436654 KCPQ6ZWJ8 1503 aa11.95□□□□□ -0.5
CTDSPL-205ENST00000436654 POLRMTO00411 1230 aaKnown RBP11.94□□□□□ -0.5
CTDSPL-205ENST00000436654 KCNA3P22001 575 aa11.94□□□□□ -0.5
CTDSPL-205ENST00000436654 TM4SF1P30408 202 aa11.94□□□□□ -0.5
CTDSPL-205ENST00000436654 VSIG10Q8N0Z9 540 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms