RNA–Protein interactions for RNA: ENST00000436395.1

LINC02558-202, Transcript of long intergenic non-protein coding RNA 2558, humanhuman

TSL 5 BASIC

Gene LINC02558, Length 298 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02558-202ENST00000436395 KDM6AO15550 1401 aaPredicted RBP22.5■■□□□ 1.19
LINC02558-202ENST00000436395 ERVV-2B6SEH9 535 aa22.5■■□□□ 1.19
LINC02558-202ENST00000436395 YBX3P16989 372 aaKnown RBP eCLIP22.5■■□□□ 1.19
LINC02558-202ENST00000436395 SSFA2P28290 1259 aa22.5■■□□□ 1.19
LINC02558-202ENST00000436395 AMER1Q5JTC6 1135 aaPredicted RBP22.5■■□□□ 1.19
LINC02558-202ENST00000436395 KIF7Q2M1P5 1343 aa22.5■■□□□ 1.19
LINC02558-202ENST00000436395 KDRP35968 1356 aa22.5■■□□□ 1.19
LINC02558-202ENST00000436395 ZNF530Q6P9A1 599 aaPredicted RBP22.49■■□□□ 1.19
LINC02558-202ENST00000436395 DCAF5Q96JK2 942 aa22.49■■□□□ 1.19
LINC02558-202ENST00000436395 GNPATO15228 680 aa22.48■■□□□ 1.19
LINC02558-202ENST00000436395 HSP90AB1P08238 724 aaKnown RBP22.48■■□□□ 1.19
LINC02558-202ENST00000436395 AMOTQ4VCS5 1084 aa22.48■■□□□ 1.19
LINC02558-202ENST00000436395 SLC4A9Q96Q91 983 aa22.48■■□□□ 1.19
LINC02558-202ENST00000436395 CD2APQ9Y5K6 639 aa22.48■■□□□ 1.19
LINC02558-202ENST00000436395 IL13P35225 146 aa22.47■■□□□ 1.19
LINC02558-202ENST00000436395 SULT6B1Q6IMI4 303 aa22.46■■□□□ 1.19
LINC02558-202ENST00000436395 ZNF831Q5JPB2 1677 aa22.45■■□□□ 1.18
LINC02558-202ENST00000436395 RBM42Q9BTD8 480 aaKnown RBP22.44■■□□□ 1.18
LINC02558-202ENST00000436395 GRIN3BO60391 1043 aa22.43■■□□□ 1.18
LINC02558-202ENST00000436395 MTHFSP49914 203 aa22.43■■□□□ 1.18
LINC02558-202ENST00000436395 CABP4P57796 275 aa22.43■■□□□ 1.18
LINC02558-202ENST00000436395 COL5A3P25940 1745 aaPredicted RBP22.43■■□□□ 1.18
LINC02558-202ENST00000436395 C1orf141Q5JVX7 400 aa22.42■■□□□ 1.18
LINC02558-202ENST00000436395 PER1O15534 1290 aaPredicted RBP22.41■■□□□ 1.18
LINC02558-202ENST00000436395 RC3H1Q5TC82 1133 aaKnown RBP22.39■■□□□ 1.17
LINC02558-202ENST00000436395 RTCBQ9Y3I0 505 aaKnown RBP22.39■■□□□ 1.17
LINC02558-202ENST00000436395 MYH14Q7Z406 1995 aaKnown RBP22.39■■□□□ 1.17
LINC02558-202ENST00000436395 SCN11AQ9UI33 1791 aa22.38■■□□□ 1.17
LINC02558-202ENST00000436395 CNTNAP4Q9C0A0 1308 aa22.38■■□□□ 1.17
LINC02558-202ENST00000436395 TRAPPC3LQ5T215 181 aa22.38■■□□□ 1.17
LINC02558-202ENST00000436395 NFATC2IPQ8NCF5 419 aa22.38■■□□□ 1.17
LINC02558-202ENST00000436395 CC2D1BQ5T0F9 858 aaKnown RBP22.37■■□□□ 1.17
LINC02558-202ENST00000436395 PTCD1O75127 700 aaKnown RBP22.36■■□□□ 1.17
LINC02558-202ENST00000436395 MMP10P09238 476 aa22.36■■□□□ 1.17
LINC02558-202ENST00000436395 ARHGEF1Q92888 912 aaKnown RBP22.36■■□□□ 1.17
LINC02558-202ENST00000436395 RPS6KA4O75676 772 aa22.35■■□□□ 1.17
LINC02558-202ENST00000436395 WWC3Q9ULE0 1092 aa22.35■■□□□ 1.17
LINC02558-202ENST00000436395 HMOX1P09601 288 aa22.34■■□□□ 1.17
LINC02558-202ENST00000436395 ADRA2BP18089 450 aa22.34■■□□□ 1.17
LINC02558-202ENST00000436395 C1QTNF8P60827 252 aa22.34■■□□□ 1.17
LINC02558-202ENST00000436395 AKAP4Q5JQC9 854 aa22.34■■□□□ 1.17
LINC02558-202ENST00000436395 TJP1Q07157 1748 aa22.34■■□□□ 1.17
LINC02558-202ENST00000436395 C4AP0C0L4 1744 aa22.33■■□□□ 1.17
LINC02558-202ENST00000436395 CICQ96RK0 1608 aaPredicted RBP22.32■■□□□ 1.16
LINC02558-202ENST00000436395 KIF13BQ9NQT8 1826 aa22.32■■□□□ 1.16
LINC02558-202ENST00000436395 LGR6Q9HBX8 967 aa22.32■■□□□ 1.16
LINC02558-202ENST00000436395 DIAPH1O60610 1272 aaKnown RBP22.31■■□□□ 1.16
LINC02558-202ENST00000436395 GYS1P13807 737 aa22.31■■□□□ 1.16
LINC02558-202ENST00000436395 RFC4P35249 363 aa22.31■■□□□ 1.16
LINC02558-202ENST00000436395 NLGN1Q8N2Q7 840 aa22.31■■□□□ 1.16
LINC02558-202ENST00000436395 VIRMAQ69YN4 1812 aaKnown RBP22.31■■□□□ 1.16
LINC02558-202ENST00000436395 KIAA1551Q9HCM1 1747 aa22.31■■□□□ 1.16
LINC02558-202ENST00000436395 GIGYF1O75420 1035 aaPredicted RBP22.3■■□□□ 1.16
LINC02558-202ENST00000436395 CRKLP46109 303 aaKnown RBP22.3■■□□□ 1.16
LINC02558-202ENST00000436395 SLC52A2Q9HAB3 445 aa22.3■■□□□ 1.16
LINC02558-202ENST00000436395 PXDNLA1KZ92 1463 aa22.29■■□□□ 1.16
LINC02558-202ENST00000436395 MRC1P22897 1456 aa22.29■■□□□ 1.16
LINC02558-202ENST00000436395 RNMTO43148 476 aaKnown RBP22.29■■□□□ 1.16
LINC02558-202ENST00000436395 MTHFSDQ2M296 383 aaKnown RBP22.29■■□□□ 1.16
LINC02558-202ENST00000436395 ATP10DQ9P241 1426 aa22.29■■□□□ 1.16
LINC02558-202ENST00000436395 COL3A1P02461 1466 aaPredicted RBP22.28■■□□□ 1.16
LINC02558-202ENST00000436395 NPC1L1Q9UHC9 1359 aa22.28■■□□□ 1.16
LINC02558-202ENST00000436395 CNGB1Q14028 1251 aaPredicted RBP22.28■■□□□ 1.16
LINC02558-202ENST00000436395 C10orf71Q711Q0 1435 aa22.28■■□□□ 1.16
LINC02558-202ENST00000436395 N4BP2Q86UW6 1770 aaPredicted RBP22.27■■□□□ 1.16
LINC02558-202ENST00000436395 ADAMTS7Q9UKP4 1686 aa22.26■■□□□ 1.15
LINC02558-202ENST00000436395 ADCY9O60503 1353 aa22.26■■□□□ 1.15
LINC02558-202ENST00000436395 INTS5Q6P9B9 1019 aaKnown RBP22.26■■□□□ 1.15
LINC02558-202ENST00000436395 DNAJC10Q8IXB1 793 aa22.26■■□□□ 1.15
LINC02558-202ENST00000436395 SRP68Q9UHB9 627 aaKnown RBP22.26■■□□□ 1.15
LINC02558-202ENST00000436395 SENP3-EIF4A1A0A087X0R7 540 aa22.25■■□□□ 1.15
LINC02558-202ENST00000436395 TGFB2P61812 414 aa22.25■■□□□ 1.15
LINC02558-202ENST00000436395 SLC39A6Q13433 755 aa22.25■■□□□ 1.15
LINC02558-202ENST00000436395 CCDC87Q9NVE4 849 aa22.25■■□□□ 1.15
LINC02558-202ENST00000436395 PARP3Q9Y6F1 533 aa22.24■■□□□ 1.15
LINC02558-202ENST00000436395 KCPQ6ZWJ8 1503 aa22.24■■□□□ 1.15
LINC02558-202ENST00000436395 USP42Q9H9J4 1324 aaKnown RBP22.24■■□□□ 1.15
LINC02558-202ENST00000436395 A0A0G2JLW4 131 aa22.23■■□□□ 1.15
LINC02558-202ENST00000436395 FKBP8Q14318 412 aa22.23■■□□□ 1.15
LINC02558-202ENST00000436395 DPEP1P16444 411 aa22.21■■□□□ 1.15
LINC02558-202ENST00000436395 U2SURPO15042 1029 aaKnown RBP22.2■■□□□ 1.14
LINC02558-202ENST00000436395 CYP19A1P11511 503 aaPredicted RBP22.2■■□□□ 1.14
LINC02558-202ENST00000436395 DDR1Q08345 913 aa22.2■■□□□ 1.14
LINC02558-202ENST00000436395 SOS1Q07889 1333 aaPredicted RBP22.2■■□□□ 1.14
LINC02558-202ENST00000436395 BRCA1P38398 1863 aaKnown RBP22.2■■□□□ 1.14
LINC02558-202ENST00000436395 ZNF526Q8TF50 670 aaPredicted RBP22.19■■□□□ 1.14
LINC02558-202ENST00000436395 BCS1LQ9Y276 419 aa22.19■■□□□ 1.14
LINC02558-202ENST00000436395 UBR2Q8IWV8 1755 aa22.18■■□□□ 1.14
LINC02558-202ENST00000436395 GPBP1L1Q9HC44 474 aaPredicted RBP22.18■■□□□ 1.14
LINC02558-202ENST00000436395 KCNA3P22001 575 aa22.17■■□□□ 1.14
LINC02558-202ENST00000436395 ZBTB1Q9Y2K1 713 aa22.17■■□□□ 1.14
LINC02558-202ENST00000436395 TM4SF1P30408 202 aa22.16■■□□□ 1.14
LINC02558-202ENST00000436395 USPL1Q5W0Q7 1092 aa22.16■■□□□ 1.14
LINC02558-202ENST00000436395 VSIG10Q8N0Z9 540 aa22.16■■□□□ 1.14
LINC02558-202ENST00000436395 POLRMTO00411 1230 aaKnown RBP22.15■■□□□ 1.14
LINC02558-202ENST00000436395 ZPR1O75312 459 aa22.15■■□□□ 1.14
LINC02558-202ENST00000436395 IL17REQ8NFR9 667 aa22.15■■□□□ 1.14
LINC02558-202ENST00000436395 GAS2L2Q8NHY3 880 aa22.15■■□□□ 1.14
LINC02558-202ENST00000436395 COL15A1P39059 1388 aa22.14■■□□□ 1.14
LINC02558-202ENST00000436395 CEP350Q5VT06 3117 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms