RNA–Protein interactions for RNA: ENST00000436354.2

UBXN1-203, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-203ENST00000436354 HSPA6P17066 643 aa25.39■■□□□ 1.66
UBXN1-203ENST00000436354 ATG3Q9NT62 314 aa25.37■■□□□ 1.65
UBXN1-203ENST00000436354 POLKQ9UBT6 870 aa25.37■■□□□ 1.65
UBXN1-203ENST00000436354 MMP10P09238 476 aa25.35■■□□□ 1.65
UBXN1-203ENST00000436354 PLEKHG2Q9H7P9 1386 aa25.34■■□□□ 1.65
UBXN1-203ENST00000436354 KIF13BQ9NQT8 1826 aa25.33■■□□□ 1.65
UBXN1-203ENST00000436354 RTCBQ9Y3I0 505 aaKnown RBP25.33■■□□□ 1.65
UBXN1-203ENST00000436354 CICQ96RK0 1608 aaPredicted RBP25.33■■□□□ 1.65
UBXN1-203ENST00000436354 TGFB2P61812 414 aa25.32■■□□□ 1.64
UBXN1-203ENST00000436354 TRAPPC3LQ5T215 181 aa25.32■■□□□ 1.64
UBXN1-203ENST00000436354 NLGN1Q8N2Q7 840 aa25.32■■□□□ 1.64
UBXN1-203ENST00000436354 EIF4A2Q14240 407 aaKnown RBP25.31■■□□□ 1.64
UBXN1-203ENST00000436354 CCER1Q8TC90 406 aaPredicted RBP25.31■■□□□ 1.64
UBXN1-203ENST00000436354 ZNF831Q5JPB2 1677 aa25.31■■□□□ 1.64
UBXN1-203ENST00000436354 PXDNLA1KZ92 1463 aa25.3■■□□□ 1.64
UBXN1-203ENST00000436354 ERVV-2B6SEH9 535 aa25.3■■□□□ 1.64
UBXN1-203ENST00000436354 KIF3CO14782 793 aa25.3■■□□□ 1.64
UBXN1-203ENST00000436354 KDRP35968 1356 aa25.3■■□□□ 1.64
UBXN1-203ENST00000436354 KIAA1551Q9HCM1 1747 aa25.29■■□□□ 1.64
UBXN1-203ENST00000436354 N4BP2Q86UW6 1770 aaPredicted RBP25.28■■□□□ 1.64
UBXN1-203ENST00000436354 HSP90AB1P08238 724 aaKnown RBP25.28■■□□□ 1.64
UBXN1-203ENST00000436354 ADRA2BP18089 450 aa25.28■■□□□ 1.64
UBXN1-203ENST00000436354 RC3H1Q5TC82 1133 aaKnown RBP25.28■■□□□ 1.64
UBXN1-203ENST00000436354 DCAF5Q96JK2 942 aa25.28■■□□□ 1.64
UBXN1-203ENST00000436354 RBM42Q9BTD8 480 aaKnown RBP25.28■■□□□ 1.64
UBXN1-203ENST00000436354 TNNT2P45379 298 aaPredicted RBP25.27■■□□□ 1.64
UBXN1-203ENST00000436354 BCS1LQ9Y276 419 aa25.27■■□□□ 1.64
UBXN1-203ENST00000436354 A0A0G2JLW4 131 aa25.26■■□□□ 1.63
UBXN1-203ENST00000436354 ARHGEF1Q92888 912 aaKnown RBP25.26■■□□□ 1.63
UBXN1-203ENST00000436354 SLC4A9Q96Q91 983 aa25.26■■□□□ 1.63
UBXN1-203ENST00000436354 TIMELESSQ9UNS1 1208 aa25.26■■□□□ 1.63
UBXN1-203ENST00000436354 COL5A3P25940 1745 aaPredicted RBP25.26■■□□□ 1.63
UBXN1-203ENST00000436354 PLEKHO1Q53GL0 409 aaPredicted RBP25.25■■□□□ 1.63
UBXN1-203ENST00000436354 CCDC87Q9NVE4 849 aa25.25■■□□□ 1.63
UBXN1-203ENST00000436354 CNTNAP4Q9C0A0 1308 aa25.25■■□□□ 1.63
UBXN1-203ENST00000436354 C10orf71Q711Q0 1435 aa25.25■■□□□ 1.63
UBXN1-203ENST00000436354 RFC4P35249 363 aa25.24■■□□□ 1.63
UBXN1-203ENST00000436354 POLR3GLQ9BT43 218 aa25.24■■□□□ 1.63
UBXN1-203ENST00000436354 C4AP0C0L4 1744 aa25.23■■□□□ 1.63
UBXN1-203ENST00000436354 RPS6KA4O75676 772 aa25.23■■□□□ 1.63
UBXN1-203ENST00000436354 GYS1P13807 737 aa25.22■■□□□ 1.63
UBXN1-203ENST00000436354 CABP4P57796 275 aa25.22■■□□□ 1.63
UBXN1-203ENST00000436354 ARHGAP27Q6ZUM4 889 aa25.22■■□□□ 1.63
UBXN1-203ENST00000436354 PARP3Q9Y6F1 533 aa25.22■■□□□ 1.63
UBXN1-203ENST00000436354 TOMM70O94826 608 aa25.21■■□□□ 1.63
UBXN1-203ENST00000436354 AMOTQ4VCS5 1084 aa25.21■■□□□ 1.63
UBXN1-203ENST00000436354 FCHSD2O94868 740 aa25.2■■□□□ 1.62
UBXN1-203ENST00000436354 DPEP1P16444 411 aa25.2■■□□□ 1.62
UBXN1-203ENST00000436354 APLP1P51693 650 aa25.2■■□□□ 1.62
UBXN1-203ENST00000436354 ZNF530Q6P9A1 599 aaPredicted RBP25.2■■□□□ 1.62
UBXN1-203ENST00000436354 BRCA1P38398 1863 aaKnown RBP25.19■■□□□ 1.62
UBXN1-203ENST00000436354 KDM6AO15550 1401 aaPredicted RBP25.19■■□□□ 1.62
UBXN1-203ENST00000436354 MYH14Q7Z406 1995 aaKnown RBP25.18■■□□□ 1.62
UBXN1-203ENST00000436354 MTHFSP49914 203 aa25.17■■□□□ 1.62
UBXN1-203ENST00000436354 C1orf141Q5JVX7 400 aa25.16■■□□□ 1.62
UBXN1-203ENST00000436354 ARFGEF1Q9Y6D6 1849 aa25.15■■□□□ 1.62
UBXN1-203ENST00000436354 PTCD1O75127 700 aaKnown RBP25.15■■□□□ 1.62
UBXN1-203ENST00000436354 KCNA3P22001 575 aa25.14■■□□□ 1.62
UBXN1-203ENST00000436354 PIM2Q9P1W9 311 aa25.14■■□□□ 1.62
UBXN1-203ENST00000436354 CRKLP46109 303 aaKnown RBP25.13■■□□□ 1.61
UBXN1-203ENST00000436354 NFATC2IPQ8NCF5 419 aa25.13■■□□□ 1.61
UBXN1-203ENST00000436354 NMRK2Q9NPI5 230 aa25.13■■□□□ 1.61
UBXN1-203ENST00000436354 PANK3Q9H999 370 aa25.12■■□□□ 1.61
UBXN1-203ENST00000436354 C9orf131Q5VYM1 1079 aa25.11■■□□□ 1.61
UBXN1-203ENST00000436354 AEBP1Q8IUX7 1158 aa25.11■■□□□ 1.61
UBXN1-203ENST00000436354 USP42Q9H9J4 1324 aaKnown RBP25.11■■□□□ 1.61
UBXN1-203ENST00000436354 SRP68Q9UHB9 627 aaKnown RBP25.1■■□□□ 1.61
UBXN1-203ENST00000436354 FKBP8Q14318 412 aa25.09■■□□□ 1.61
UBXN1-203ENST00000436354 DALRD3Q5D0E6 543 aaKnown RBP25.09■■□□□ 1.61
UBXN1-203ENST00000436354 MORC1Q86VD1 984 aa25.09■■□□□ 1.61
UBXN1-203ENST00000436354 DNAJC5GQ8N7S2 189 aa25.09■■□□□ 1.61
UBXN1-203ENST00000436354 TJP1Q07157 1748 aa25.09■■□□□ 1.61
UBXN1-203ENST00000436354 EIF4G2P78344 907 aaKnown RBP eCLIP25.08■■□□□ 1.61
UBXN1-203ENST00000436354 C16orf71Q8IYS4 520 aaPredicted RBP25.08■■□□□ 1.61
UBXN1-203ENST00000436354 RBM46Q8TBY0 533 aaKnown RBP25.08■■□□□ 1.61
UBXN1-203ENST00000436354 DDR1Q08345 913 aa25.07■■□□□ 1.6
UBXN1-203ENST00000436354 SULT6B1Q6IMI4 303 aa25.07■■□□□ 1.6
UBXN1-203ENST00000436354 SCN11AQ9UI33 1791 aa25.07■■□□□ 1.6
UBXN1-203ENST00000436354 KDM2BQ8NHM5 1336 aa25.06■■□□□ 1.6
UBXN1-203ENST00000436354 INTS5Q6P9B9 1019 aaKnown RBP25.05■■□□□ 1.6
UBXN1-203ENST00000436354 WDR90Q96KV7 1748 aa25.04■■□□□ 1.6
UBXN1-203ENST00000436354 ZPR1O75312 459 aa25.03■■□□□ 1.6
UBXN1-203ENST00000436354 RNF181Q9P0P0 153 aa25.03■■□□□ 1.6
UBXN1-203ENST00000436354 ADAMTS7Q9UKP4 1686 aa25.02■■□□□ 1.6
UBXN1-203ENST00000436354 POLRMTO00411 1230 aaKnown RBP25.02■■□□□ 1.6
UBXN1-203ENST00000436354 HSPA5P11021 654 aaKnown RBP25.02■■□□□ 1.6
UBXN1-203ENST00000436354 TM4SF1P30408 202 aa25.02■■□□□ 1.6
UBXN1-203ENST00000436354 CHRNA5P30532 468 aa25.02■■□□□ 1.6
UBXN1-203ENST00000436354 FSTL1Q12841 308 aa25.02■■□□□ 1.6
UBXN1-203ENST00000436354 KCPQ6ZWJ8 1503 aa25.02■■□□□ 1.6
UBXN1-203ENST00000436354 IL13P35225 146 aa25.01■■□□□ 1.59
UBXN1-203ENST00000436354 AKAP4Q5JQC9 854 aa25.01■■□□□ 1.59
UBXN1-203ENST00000436354 DNAJC10Q8IXB1 793 aa25■■□□□ 1.59
UBXN1-203ENST00000436354 KNSTRNQ9Y448 316 aa25■■□□□ 1.59
UBXN1-203ENST00000436354 SBF1O95248 1867 aa25■■□□□ 1.59
UBXN1-203ENST00000436354 USPL1Q5W0Q7 1092 aa24.99■■□□□ 1.59
UBXN1-203ENST00000436354 SLC52A2Q9HAB3 445 aa24.99■■□□□ 1.59
UBXN1-203ENST00000436354 TNRC6CQ9HCJ0 1690 aaKnown RBP24.98■■□□□ 1.59
UBXN1-203ENST00000436354 SOS1Q07889 1333 aaPredicted RBP24.98■■□□□ 1.59
UBXN1-203ENST00000436354 RRAGCQ9HB90 399 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms