RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 PHF14O94880 888 aa15.1■□□□□ 0.01
SPTLC1P4-201ENST00000435997 EIF4G2P78344 907 aaKnown RBP eCLIP15.1■□□□□ 0.01
SPTLC1P4-201ENST00000435997 GNPATO15228 680 aa15.09■□□□□ 0.01
SPTLC1P4-201ENST00000435997 GIGYF1O75420 1035 aaPredicted RBP15.09■□□□□ 0.01
SPTLC1P4-201ENST00000435997 HSPA5P11021 654 aaKnown RBP15.09■□□□□ 0.01
SPTLC1P4-201ENST00000435997 TNNT2P45379 298 aaPredicted RBP15.09■□□□□ 0.01
SPTLC1P4-201ENST00000435997 MAPK8IP2Q13387 824 aaPredicted RBP15.09■□□□□ 0.01
SPTLC1P4-201ENST00000435997 SLC4A9Q96Q91 983 aa15.09■□□□□ 0.01
SPTLC1P4-201ENST00000435997 PANK3Q9H999 370 aa15.09■□□□□ 0.01
SPTLC1P4-201ENST00000435997 ATP10DQ9P241 1426 aa15.09■□□□□ 0.01
SPTLC1P4-201ENST00000435997 CICQ96RK0 1608 aaPredicted RBP15.08■□□□□ 0
SPTLC1P4-201ENST00000435997 ERVV-2B6SEH9 535 aa15.08■□□□□ 0
SPTLC1P4-201ENST00000435997 ATP6V1AP38606 617 aa15.08■□□□□ 0
SPTLC1P4-201ENST00000435997 DCAF5Q96JK2 942 aa15.08■□□□□ 0
SPTLC1P4-201ENST00000435997 SENP3-EIF4A1A0A087X0R7 540 aa15.07■□□□□ 0
SPTLC1P4-201ENST00000435997 HSP90AB1P08238 724 aaKnown RBP15.06■□□□□ 0
SPTLC1P4-201ENST00000435997 POLR3GLQ9BT43 218 aa15.06■□□□□ 0
SPTLC1P4-201ENST00000435997 CNTNAP4Q9C0A0 1308 aa15.06■□□□□ 0
SPTLC1P4-201ENST00000435997 PXDNLA1KZ92 1463 aa15.06■□□□□ 0
SPTLC1P4-201ENST00000435997 PCGF6Q9BYE7 350 aa15.05■□□□□ -0
SPTLC1P4-201ENST00000435997 C10orf71Q711Q0 1435 aa15.05■□□□□ -0
SPTLC1P4-201ENST00000435997 COL5A3P25940 1745 aaPredicted RBP15.05■□□□□ -0
SPTLC1P4-201ENST00000435997 AMOTQ4VCS5 1084 aa15.04■□□□□ -0
SPTLC1P4-201ENST00000435997 RC3H1Q5TC82 1133 aaKnown RBP15.04■□□□□ -0
SPTLC1P4-201ENST00000435997 AEBP1Q8IUX7 1158 aa15.04■□□□□ -0
SPTLC1P4-201ENST00000435997 KIAA1551Q9HCM1 1747 aa15.03■□□□□ -0
SPTLC1P4-201ENST00000435997 MMP10P09238 476 aa15.03■□□□□ -0
SPTLC1P4-201ENST00000435997 PLEKHO1Q53GL0 409 aaPredicted RBP15.03■□□□□ -0
SPTLC1P4-201ENST00000435997 KIF13BQ9NQT8 1826 aa15.02■□□□□ -0
SPTLC1P4-201ENST00000435997 AMER1Q5JTC6 1135 aaPredicted RBP15.02■□□□□ -0
SPTLC1P4-201ENST00000435997 ZNF530Q6P9A1 599 aaPredicted RBP15.02■□□□□ -0
SPTLC1P4-201ENST00000435997 RTCBQ9Y3I0 505 aaKnown RBP15.02■□□□□ -0
SPTLC1P4-201ENST00000435997 IL13P35225 146 aa15.01□□□□□ -0.01
SPTLC1P4-201ENST00000435997 MRC1P22897 1456 aa15.01□□□□□ -0.01
SPTLC1P4-201ENST00000435997 RPS6KA4O75676 772 aa15□□□□□ -0.01
SPTLC1P4-201ENST00000435997 GYS1P13807 737 aa15□□□□□ -0.01
SPTLC1P4-201ENST00000435997 CABP4P57796 275 aa15□□□□□ -0.01
SPTLC1P4-201ENST00000435997 TRAPPC3LQ5T215 181 aa15□□□□□ -0.01
SPTLC1P4-201ENST00000435997 MORC1Q86VD1 984 aa15□□□□□ -0.01
SPTLC1P4-201ENST00000435997 MTHFSP49914 203 aa14.99□□□□□ -0.01
SPTLC1P4-201ENST00000435997 NLGN1Q8N2Q7 840 aa14.99□□□□□ -0.01
SPTLC1P4-201ENST00000435997 ARHGEF1Q92888 912 aaKnown RBP14.99□□□□□ -0.01
SPTLC1P4-201ENST00000435997 C4AP0C0L4 1744 aa14.99□□□□□ -0.01
SPTLC1P4-201ENST00000435997 TJP1Q07157 1748 aa14.98□□□□□ -0.01
SPTLC1P4-201ENST00000435997 TGFB2P61812 414 aa14.98□□□□□ -0.01
SPTLC1P4-201ENST00000435997 SULT6B1Q6IMI4 303 aa14.98□□□□□ -0.01
SPTLC1P4-201ENST00000435997 RBM42Q9BTD8 480 aaKnown RBP14.98□□□□□ -0.01
SPTLC1P4-201ENST00000435997 GPBP1L1Q9HC44 474 aaPredicted RBP14.98□□□□□ -0.01
SPTLC1P4-201ENST00000435997 WWC3Q9ULE0 1092 aa14.98□□□□□ -0.01
SPTLC1P4-201ENST00000435997 KNSTRNQ9Y448 316 aa14.98□□□□□ -0.01
SPTLC1P4-201ENST00000435997 CEP350Q5VT06 3117 aa14.98□□□□□ -0.01
SPTLC1P4-201ENST00000435997 KIF7Q2M1P5 1343 aa14.97□□□□□ -0.01
SPTLC1P4-201ENST00000435997 ADAMTS7Q9UKP4 1686 aa14.97□□□□□ -0.01
SPTLC1P4-201ENST00000435997 C1orf141Q5JVX7 400 aa14.97□□□□□ -0.01
SPTLC1P4-201ENST00000435997 CRKLP46109 303 aaKnown RBP14.96□□□□□ -0.01
SPTLC1P4-201ENST00000435997 NFATC2IPQ8NCF5 419 aa14.96□□□□□ -0.01
SPTLC1P4-201ENST00000435997 MYH14Q7Z406 1995 aaKnown RBP14.96□□□□□ -0.01
SPTLC1P4-201ENST00000435997 USP42Q9H9J4 1324 aaKnown RBP14.95□□□□□ -0.02
SPTLC1P4-201ENST00000435997 PTCD1O75127 700 aaKnown RBP14.95□□□□□ -0.02
SPTLC1P4-201ENST00000435997 RFC4P35249 363 aa14.95□□□□□ -0.02
SPTLC1P4-201ENST00000435997 KCPQ6ZWJ8 1503 aa14.94□□□□□ -0.02
SPTLC1P4-201ENST00000435997 PER1O15534 1290 aaPredicted RBP14.94□□□□□ -0.02
SPTLC1P4-201ENST00000435997 AKAP4Q5JQC9 854 aa14.94□□□□□ -0.02
SPTLC1P4-201ENST00000435997 CCER1Q8TC90 406 aaPredicted RBP14.94□□□□□ -0.02
SPTLC1P4-201ENST00000435997 CCDC87Q9NVE4 849 aa14.94□□□□□ -0.02
SPTLC1P4-201ENST00000435997 SCN11AQ9UI33 1791 aa14.93□□□□□ -0.02
SPTLC1P4-201ENST00000435997 KIF3CO14782 793 aa14.93□□□□□ -0.02
SPTLC1P4-201ENST00000435997 KCNA3P22001 575 aa14.93□□□□□ -0.02
SPTLC1P4-201ENST00000435997 INTS5Q6P9B9 1019 aaKnown RBP14.93□□□□□ -0.02
SPTLC1P4-201ENST00000435997 SLC52A2Q9HAB3 445 aa14.93□□□□□ -0.02
SPTLC1P4-201ENST00000435997 COL3A1P02461 1466 aaPredicted RBP14.93□□□□□ -0.02
SPTLC1P4-201ENST00000435997 BRCA1P38398 1863 aaKnown RBP14.93□□□□□ -0.02
SPTLC1P4-201ENST00000435997 A0A0G2JLW4 131 aa14.92□□□□□ -0.02
SPTLC1P4-201ENST00000435997 DPEP1P16444 411 aa14.92□□□□□ -0.02
SPTLC1P4-201ENST00000435997 DDR1Q08345 913 aa14.92□□□□□ -0.02
SPTLC1P4-201ENST00000435997 FKBP8Q14318 412 aa14.92□□□□□ -0.02
SPTLC1P4-201ENST00000435997 ZNF526Q8TF50 670 aaPredicted RBP14.92□□□□□ -0.02
SPTLC1P4-201ENST00000435997 SRP68Q9UHB9 627 aaKnown RBP14.92□□□□□ -0.02
SPTLC1P4-201ENST00000435997 SOS1Q07889 1333 aaPredicted RBP14.92□□□□□ -0.02
SPTLC1P4-201ENST00000435997 N4BP2Q86UW6 1770 aaPredicted RBP14.91□□□□□ -0.02
SPTLC1P4-201ENST00000435997 NPC1L1Q9UHC9 1359 aa14.91□□□□□ -0.02
SPTLC1P4-201ENST00000435997 BCS1LQ9Y276 419 aa14.91□□□□□ -0.02
SPTLC1P4-201ENST00000435997 PARP3Q9Y6F1 533 aa14.91□□□□□ -0.02
SPTLC1P4-201ENST00000435997 RNMTO43148 476 aaKnown RBP14.9□□□□□ -0.02
SPTLC1P4-201ENST00000435997 HSPA6P17066 643 aa14.9□□□□□ -0.02
SPTLC1P4-201ENST00000435997 LGR6Q9HBX8 967 aa14.9□□□□□ -0.02
SPTLC1P4-201ENST00000435997 POLRMTO00411 1230 aaKnown RBP14.89□□□□□ -0.03
SPTLC1P4-201ENST00000435997 DNAJC10Q8IXB1 793 aa14.89□□□□□ -0.03
SPTLC1P4-201ENST00000435997 HMOX1P09601 288 aa14.88□□□□□ -0.03
SPTLC1P4-201ENST00000435997 CYP19A1P11511 503 aaPredicted RBP14.88□□□□□ -0.03
SPTLC1P4-201ENST00000435997 TM4SF1P30408 202 aa14.88□□□□□ -0.03
SPTLC1P4-201ENST00000435997 MTHFSDQ2M296 383 aaKnown RBP14.88□□□□□ -0.03
SPTLC1P4-201ENST00000435997 FCHSD2O94868 740 aa14.87□□□□□ -0.03
SPTLC1P4-201ENST00000435997 COL15A1P39059 1388 aa14.86□□□□□ -0.03
SPTLC1P4-201ENST00000435997 UBR2Q8IWV8 1755 aa14.86□□□□□ -0.03
SPTLC1P4-201ENST00000435997 DIAPH1O60610 1272 aaKnown RBP14.86□□□□□ -0.03
SPTLC1P4-201ENST00000435997 SLC39A6Q13433 755 aa14.86□□□□□ -0.03
SPTLC1P4-201ENST00000435997 VSIG10Q8N0Z9 540 aa14.86□□□□□ -0.03
SPTLC1P4-201ENST00000435997 ZBTB1Q9Y2K1 713 aa14.86□□□□□ -0.03
SPTLC1P4-201ENST00000435997 NRXN2Q9P2S2 1712 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms