RNA–Protein interactions for RNA: ENST00000435401.1

LINC00353-201, long intergenic non-protein coding RNA 353, humanhuman

TSL 5 BASIC

Gene LINC00353, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00353-201ENST00000435401 RNF135Q8IUD6 432 aa8.71□□□□□ -1.02
LINC00353-201ENST00000435401 SIRT1Q96EB6 747 aa8.71□□□□□ -1.02
LINC00353-201ENST00000435401 CFHR5Q9BXR6 569 aa8.71□□□□□ -1.02
LINC00353-201ENST00000435401 A0A1B0GTH6 734 aa8.7□□□□□ -1.02
LINC00353-201ENST00000435401 BCRP11274 1271 aa8.7□□□□□ -1.02
LINC00353-201ENST00000435401 MX2P20592 715 aa8.7□□□□□ -1.02
LINC00353-201ENST00000435401 TMEM214Q6NUQ4 689 aaKnown RBP8.7□□□□□ -1.02
LINC00353-201ENST00000435401 FHDC1Q9C0D6 1143 aaPredicted RBP8.7□□□□□ -1.02
LINC00353-201ENST00000435401 CHIC2Q9UKJ5 165 aa8.7□□□□□ -1.02
LINC00353-201ENST00000435401 PHKA2P46019 1235 aa8.69□□□□□ -1.02
LINC00353-201ENST00000435401 WASHC4Q2M389 1173 aa8.69□□□□□ -1.02
LINC00353-201ENST00000435401 LRRC4BQ9NT99 713 aa8.69□□□□□ -1.02
LINC00353-201ENST00000435401 DNMT3AQ9Y6K1 912 aaPredicted RBP8.69□□□□□ -1.02
LINC00353-201ENST00000435401 VAC14Q08AM6 782 aa8.68□□□□□ -1.02
LINC00353-201ENST00000435401 LBRQ14739 615 aaKnown RBP8.68□□□□□ -1.02
LINC00353-201ENST00000435401 ACDQ96AP0 544 aa8.68□□□□□ -1.02
LINC00353-201ENST00000435401 GDPD2Q9HCC8 539 aa8.68□□□□□ -1.02
LINC00353-201ENST00000435401 PHF24Q9UPV7 400 aa8.68□□□□□ -1.02
LINC00353-201ENST00000435401 PHF20L1A8MW92 1017 aa8.67□□□□□ -1.02
LINC00353-201ENST00000435401 CSB-PGBD3P0DP91 1061 aa8.67□□□□□ -1.02
LINC00353-201ENST00000435401 MAP2K3P46734 347 aa8.67□□□□□ -1.02
LINC00353-201ENST00000435401 MAP7D1Q3KQU3 841 aa8.67□□□□□ -1.02
LINC00353-201ENST00000435401 C4orf17Q53FE4 359 aa8.67□□□□□ -1.02
LINC00353-201ENST00000435401 OXLD1Q5BKU9 147 aa8.67□□□□□ -1.02
LINC00353-201ENST00000435401 PGBD3Q8N328 593 aa8.67□□□□□ -1.02
LINC00353-201ENST00000435401 BEND7Q8N7W2 519 aaPredicted RBP8.67□□□□□ -1.02
LINC00353-201ENST00000435401 NEDD1Q8NHV4 660 aa8.67□□□□□ -1.02
LINC00353-201ENST00000435401 GPAMQ9HCL2 828 aa8.67□□□□□ -1.02
LINC00353-201ENST00000435401 ABL2P42684 1182 aa8.66□□□□□ -1.02
LINC00353-201ENST00000435401 FOXK2Q01167 660 aa8.66□□□□□ -1.02
LINC00353-201ENST00000435401 PPARGC1BQ86YN6 1023 aaKnown RBP8.66□□□□□ -1.02
LINC00353-201ENST00000435401 RHBDD1Q8TEB9 315 aa8.66□□□□□ -1.02
LINC00353-201ENST00000435401 ETNK1Q9HBU6 452 aa8.66□□□□□ -1.02
LINC00353-201ENST00000435401 IGHA1P01876 353 aa8.65□□□□□ -1.02
LINC00353-201ENST00000435401 THBS1P07996 1170 aa8.65□□□□□ -1.02
LINC00353-201ENST00000435401 MSX1P28360 303 aa8.65□□□□□ -1.02
LINC00353-201ENST00000435401 SOX11P35716 441 aa8.65□□□□□ -1.02
LINC00353-201ENST00000435401 CNTNAP5Q8WYK1 1306 aa8.64□□□□□ -1.03
LINC00353-201ENST00000435401 SEMA3FQ13275 785 aa8.64□□□□□ -1.03
LINC00353-201ENST00000435401 TLR1Q15399 786 aa8.64□□□□□ -1.03
LINC00353-201ENST00000435401 EFHC2Q5JST6 749 aa8.64□□□□□ -1.03
LINC00353-201ENST00000435401 PODNQ7Z5L7 613 aa8.64□□□□□ -1.03
LINC00353-201ENST00000435401 OIP5O43482 229 aa8.63□□□□□ -1.03
LINC00353-201ENST00000435401 INHAP05111 366 aa8.63□□□□□ -1.03
LINC00353-201ENST00000435401 SUZ12Q15022 739 aaKnown RBP8.63□□□□□ -1.03
LINC00353-201ENST00000435401 OXCT2Q9BYC2 517 aaPredicted RBP8.63□□□□□ -1.03
LINC00353-201ENST00000435401 RUBCNLQ9H714 662 aa8.63□□□□□ -1.03
LINC00353-201ENST00000435401 STAU1O95793 577 aaKnown RBP8.62□□□□□ -1.03
LINC00353-201ENST00000435401 UBAP2LQ14157 1087 aaKnown RBP8.62□□□□□ -1.03
LINC00353-201ENST00000435401 GPAT2Q6NUI2 795 aa8.62□□□□□ -1.03
LINC00353-201ENST00000435401 PLPP7Q8NBV4 271 aa8.62□□□□□ -1.03
LINC00353-201ENST00000435401 SCNN1DP51172 638 aa8.61□□□□□ -1.03
LINC00353-201ENST00000435401 GDF10P55107 478 aa8.61□□□□□ -1.03
LINC00353-201ENST00000435401 KLRG1Q96E93 195 aa8.61□□□□□ -1.03
LINC00353-201ENST00000435401 ATXN7L1Q9ULK2 861 aaPredicted RBP8.61□□□□□ -1.03
LINC00353-201ENST00000435401 CRISPLD1Q9H336 500 aa8.6□□□□□ -1.03
LINC00353-201ENST00000435401 GDF2Q9UK05 429 aaPredicted RBP8.6□□□□□ -1.03
LINC00353-201ENST00000435401 SMTNP53814 917 aa8.59□□□□□ -1.03
LINC00353-201ENST00000435401 MCM6Q14566 821 aa8.59□□□□□ -1.03
LINC00353-201ENST00000435401 TBC1D9Q6ZT07 1266 aa8.59□□□□□ -1.03
LINC00353-201ENST00000435401 GALNT6Q8NCL4 622 aa8.59□□□□□ -1.03
LINC00353-201ENST00000435401 C1orf216Q8TAB5 229 aa8.59□□□□□ -1.03
LINC00353-201ENST00000435401 NIFKQ9BYG3 293 aaKnown RBP8.59□□□□□ -1.03
LINC00353-201ENST00000435401 PLA2G4AP47712 749 aa8.58□□□□□ -1.04
LINC00353-201ENST00000435401 FIGNL1Q6PIW4 674 aa8.58□□□□□ -1.04
LINC00353-201ENST00000435401 NDFIP2Q9NV92 336 aa8.58□□□□□ -1.04
LINC00353-201ENST00000435401 BMP4P12644 408 aa8.57□□□□□ -1.04
LINC00353-201ENST00000435401 GOLGA6L1Q8N7Z2 621 aa8.57□□□□□ -1.04
LINC00353-201ENST00000435401 EDARADDQ8WWZ3 215 aa8.57□□□□□ -1.04
LINC00353-201ENST00000435401 AIDAQ96BJ3 306 aa8.57□□□□□ -1.04
LINC00353-201ENST00000435401 DCAF5Q96JK2 942 aa8.57□□□□□ -1.04
LINC00353-201ENST00000435401 SLC4A9Q96Q91 983 aa8.57□□□□□ -1.04
LINC00353-201ENST00000435401 LOC100996750A0A140TA64 210 aa8.56□□□□□ -1.04
LINC00353-201ENST00000435401 CDK2AP1O14519 115 aa8.56□□□□□ -1.04
LINC00353-201ENST00000435401 BNIP3LO60238 219 aa8.56□□□□□ -1.04
LINC00353-201ENST00000435401 LZTS3O60299 673 aaPredicted RBP8.56□□□□□ -1.04
LINC00353-201ENST00000435401 FGFR3P22607 806 aa8.56□□□□□ -1.04
LINC00353-201ENST00000435401 NLRP8Q86W28 1048 aa8.56□□□□□ -1.04
LINC00353-201ENST00000435401 WWC1Q8IX03 1113 aa8.56□□□□□ -1.04
LINC00353-201ENST00000435401 ABHD17AQ96GS6 310 aa8.56□□□□□ -1.04
LINC00353-201ENST00000435401 KRTAP4-6Q9BYQ5 205 aa8.56□□□□□ -1.04
LINC00353-201ENST00000435401 COG6Q9Y2V7 657 aa8.56□□□□□ -1.04
LINC00353-201ENST00000435401 PLA2G4EQ3MJ16 856 aa8.55□□□□□ -1.04
LINC00353-201ENST00000435401 C1orf229Q6ZS94 237 aaPredicted RBP8.55□□□□□ -1.04
LINC00353-201ENST00000435401 ZCCHC2Q9C0B9 1178 aaKnown RBP8.55□□□□□ -1.04
LINC00353-201ENST00000435401 SERTAD1Q9UHV2 236 aa8.55□□□□□ -1.04
LINC00353-201ENST00000435401 PCDHGC4Q9Y5F7 938 aa8.55□□□□□ -1.04
LINC00353-201ENST00000435401 TMEM229AB2RXF0 380 aa8.54□□□□□ -1.04
LINC00353-201ENST00000435401 SHISA8B8ZZ34 492 aa8.54□□□□□ -1.04
LINC00353-201ENST00000435401 C2CD2LO14523 706 aa8.54□□□□□ -1.04
LINC00353-201ENST00000435401 CTBSQ01459 385 aa8.54□□□□□ -1.04
LINC00353-201ENST00000435401 MTFR1Q15390 333 aa8.54□□□□□ -1.04
LINC00353-201ENST00000435401 EML3Q32P44 896 aa8.54□□□□□ -1.04
LINC00353-201ENST00000435401 MKL2Q9ULH7 1088 aa8.54□□□□□ -1.04
LINC00353-201ENST00000435401 PCDHGA11Q9Y5H2 935 aa8.54□□□□□ -1.04
LINC00353-201ENST00000435401 A6NJY4 79 aa8.53□□□□□ -1.04
LINC00353-201ENST00000435401 MSTNO14793 375 aa8.53□□□□□ -1.04
LINC00353-201ENST00000435401 BACH1O14867 736 aa8.53□□□□□ -1.04
LINC00353-201ENST00000435401 SKIP12755 728 aa8.53□□□□□ -1.04
LINC00353-201ENST00000435401 SNRPNP63162 240 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms