RNA–Protein interactions for RNA: ENST00000435305.1

PTPA-219, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 2 BASIC

Gene PTPA, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-219ENST00000435305 NPC1L1Q9UHC9 1359 aa17.07■□□□□ 0.32
PTPA-219ENST00000435305 RBM42Q9BTD8 480 aaKnown RBP17.07■□□□□ 0.32
PTPA-219ENST00000435305 C4BP0C0L5 1744 aa17.07■□□□□ 0.32
PTPA-219ENST00000435305 YY1P25490 414 aa17.06■□□□□ 0.32
PTPA-219ENST00000435305 ATG3Q9NT62 314 aa17.05■□□□□ 0.32
PTPA-219ENST00000435305 KDRP35968 1356 aa17.04■□□□□ 0.32
PTPA-219ENST00000435305 PHF14O94880 888 aa17.04■□□□□ 0.32
PTPA-219ENST00000435305 HMOX1P09601 288 aa17.04■□□□□ 0.32
PTPA-219ENST00000435305 AKAP4Q5JQC9 854 aa17.04■□□□□ 0.32
PTPA-219ENST00000435305 CFAP53Q96M91 514 aa17.04■□□□□ 0.32
PTPA-219ENST00000435305 COL24A1Q17RW2 1714 aa17.04■□□□□ 0.32
PTPA-219ENST00000435305 MAP3K5Q99683 1374 aa17.03■□□□□ 0.32
PTPA-219ENST00000435305 U2SURPO15042 1029 aaKnown RBP17.03■□□□□ 0.32
PTPA-219ENST00000435305 SSFA2P28290 1259 aa17.03■□□□□ 0.32
PTPA-219ENST00000435305 UBR3Q6ZT12 1888 aa17.03■□□□□ 0.32
PTPA-219ENST00000435305 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.02■□□□□ 0.32
PTPA-219ENST00000435305 GNPATO15228 680 aa17.02■□□□□ 0.32
PTPA-219ENST00000435305 GPR162Q16538 588 aa17.02■□□□□ 0.32
PTPA-219ENST00000435305 MSL1Q68DK7 614 aa17.02■□□□□ 0.32
PTPA-219ENST00000435305 LINC00116Q8NCU8 138 aa17.02■□□□□ 0.32
PTPA-219ENST00000435305 SCN11AQ9UI33 1791 aa17.02■□□□□ 0.31
PTPA-219ENST00000435305 MIER1Q8N108 512 aa17.01■□□□□ 0.31
PTPA-219ENST00000435305 NFATC2IPQ8NCF5 419 aa17.01■□□□□ 0.31
PTPA-219ENST00000435305 VIRMAQ69YN4 1812 aaKnown RBP17■□□□□ 0.31
PTPA-219ENST00000435305 KDM6AO15550 1401 aaPredicted RBP17■□□□□ 0.31
PTPA-219ENST00000435305 PELP1Q8IZL8 1130 aaKnown RBP17■□□□□ 0.31
PTPA-219ENST00000435305 NUDCQ9Y266 331 aa17■□□□□ 0.31
PTPA-219ENST00000435305 RTCBQ9Y3I0 505 aaKnown RBP17■□□□□ 0.31
PTPA-219ENST00000435305 CHD4Q14839 1912 aa17■□□□□ 0.31
PTPA-219ENST00000435305 PTCD1O75127 700 aaKnown RBP16.99■□□□□ 0.31
PTPA-219ENST00000435305 ITPK1Q13572 414 aa16.99■□□□□ 0.31
PTPA-219ENST00000435305 ZNF831Q5JPB2 1677 aa16.98■□□□□ 0.31
PTPA-219ENST00000435305 TRAPPC3LQ5T215 181 aa16.98■□□□□ 0.31
PTPA-219ENST00000435305 RC3H1Q5TC82 1133 aaKnown RBP16.97■□□□□ 0.31
PTPA-219ENST00000435305 RNMTO43148 476 aaKnown RBP16.96■□□□□ 0.31
PTPA-219ENST00000435305 MTHFSDQ2M296 383 aaKnown RBP16.96■□□□□ 0.31
PTPA-219ENST00000435305 GAS2L2Q8NHY3 880 aa16.96■□□□□ 0.31
PTPA-219ENST00000435305 SLC52A2Q9HAB3 445 aa16.96■□□□□ 0.31
PTPA-219ENST00000435305 ADRA2BP18089 450 aa16.95■□□□□ 0.3
PTPA-219ENST00000435305 RFC4P35249 363 aa16.95■□□□□ 0.3
PTPA-219ENST00000435305 LGR6Q9HBX8 967 aa16.95■□□□□ 0.3
PTPA-219ENST00000435305 CD2APQ9Y5K6 639 aa16.95■□□□□ 0.3
PTPA-219ENST00000435305 ANP32CO43423 234 aa16.94■□□□□ 0.3
PTPA-219ENST00000435305 RPS6KA4O75676 772 aa16.94■□□□□ 0.3
PTPA-219ENST00000435305 SMIM5Q71RC9 77 aa16.94■□□□□ 0.3
PTPA-219ENST00000435305 CNTNAP4Q9C0A0 1308 aa16.94■□□□□ 0.3
PTPA-219ENST00000435305 COL5A3P25940 1745 aaPredicted RBP16.93■□□□□ 0.3
PTPA-219ENST00000435305 NLGN1Q8N2Q7 840 aa16.93■□□□□ 0.3
PTPA-219ENST00000435305 SLC4A9Q96Q91 983 aa16.93■□□□□ 0.3
PTPA-219ENST00000435305 GNAT3A8MTJ3 354 aa16.92■□□□□ 0.3
PTPA-219ENST00000435305 GRIN3BO60391 1043 aa16.92■□□□□ 0.3
PTPA-219ENST00000435305 TEFQ10587 303 aa16.92■□□□□ 0.3
PTPA-219ENST00000435305 AMIGO3Q86WK7 504 aa16.92■□□□□ 0.3
PTPA-219ENST00000435305 TTC5Q8N0Z6 440 aa16.92■□□□□ 0.3
PTPA-219ENST00000435305 NLGN2Q8NFZ4 835 aa16.92■□□□□ 0.3
PTPA-219ENST00000435305 NEFMP07197 916 aa16.91■□□□□ 0.3
PTPA-219ENST00000435305 PPP2R1AP30153 589 aa16.91■□□□□ 0.3
PTPA-219ENST00000435305 CRKLP46109 303 aaKnown RBP16.91■□□□□ 0.3
PTPA-219ENST00000435305 ARHGEF1Q92888 912 aaKnown RBP16.91■□□□□ 0.3
PTPA-219ENST00000435305 COL3A1P02461 1466 aaPredicted RBP16.91■□□□□ 0.3
PTPA-219ENST00000435305 MYH14Q7Z406 1995 aaKnown RBP16.9■□□□□ 0.3
PTPA-219ENST00000435305 U2AF1L5P0DN76 240 aaPredicted RBP16.9■□□□□ 0.3
PTPA-219ENST00000435305 U2AF1Q01081 240 aaKnown RBP eCLIP16.9■□□□□ 0.3
PTPA-219ENST00000435305 PRKAR2BP31323 418 aa16.89■□□□□ 0.29
PTPA-219ENST00000435305 SLC39A6Q13433 755 aa16.89■□□□□ 0.29
PTPA-219ENST00000435305 MMP10P09238 476 aa16.88■□□□□ 0.29
PTPA-219ENST00000435305 RTF1Q92541 710 aaKnown RBP16.88■□□□□ 0.29
PTPA-219ENST00000435305 PARP3Q9Y6F1 533 aa16.88■□□□□ 0.29
PTPA-219ENST00000435305 FCHSD2O94868 740 aa16.87■□□□□ 0.29
PTPA-219ENST00000435305 VSIG10Q8N0Z9 540 aa16.87■□□□□ 0.29
PTPA-219ENST00000435305 CCDC87Q9NVE4 849 aa16.87■□□□□ 0.29
PTPA-219ENST00000435305 MRC1P22897 1456 aa16.86■□□□□ 0.29
PTPA-219ENST00000435305 ZPR1O75312 459 aa16.86■□□□□ 0.29
PTPA-219ENST00000435305 DNAJC10Q8IXB1 793 aa16.86■□□□□ 0.29
PTPA-219ENST00000435305 PRKRIP1Q9H875 184 aaPredicted RBP16.86■□□□□ 0.29
PTPA-219ENST00000435305 TJP1Q07157 1748 aa16.86■□□□□ 0.29
PTPA-219ENST00000435305 CICQ96RK0 1608 aaPredicted RBP16.85■□□□□ 0.29
PTPA-219ENST00000435305 ADAMTS7Q9UKP4 1686 aa16.85■□□□□ 0.29
PTPA-219ENST00000435305 STARD3NLO95772 234 aa16.85■□□□□ 0.29
PTPA-219ENST00000435305 RSPH6AQ9H0K4 717 aa16.85■□□□□ 0.29
PTPA-219ENST00000435305 GYS1P13807 737 aa16.84■□□□□ 0.29
PTPA-219ENST00000435305 NPM2Q86SE8 214 aaKnown RBP16.84■□□□□ 0.29
PTPA-219ENST00000435305 IL17REQ8NFR9 667 aa16.84■□□□□ 0.29
PTPA-219ENST00000435305 TEX13AQ9BXU3 409 aaPredicted RBP16.84■□□□□ 0.29
PTPA-219ENST00000435305 PNNQ9H307 717 aaKnown RBP16.84■□□□□ 0.29
PTPA-219ENST00000435305 C4AP0C0L4 1744 aa16.84■□□□□ 0.29
PTPA-219ENST00000435305 CYP19A1P11511 503 aaPredicted RBP16.83■□□□□ 0.28
PTPA-219ENST00000435305 INTS5Q6P9B9 1019 aaKnown RBP16.83■□□□□ 0.28
PTPA-219ENST00000435305 PHACTR3Q96KR7 559 aa16.83■□□□□ 0.28
PTPA-219ENST00000435305 BTBD11A6QL63 1104 aa16.82■□□□□ 0.28
PTPA-219ENST00000435305 CCER2I3L3R5 266 aa16.82■□□□□ 0.28
PTPA-219ENST00000435305 YBX3P16989 372 aaKnown RBP eCLIP16.82■□□□□ 0.289e-8■□□□□ 11.1
PTPA-219ENST00000435305 TGFB2P61812 414 aa16.82■□□□□ 0.28
PTPA-219ENST00000435305 ZNF790Q6PG37 636 aa16.82■□□□□ 0.28
PTPA-219ENST00000435305 ZNF784Q8NCA9 323 aaPredicted RBP16.82■□□□□ 0.28
PTPA-219ENST00000435305 USP42Q9H9J4 1324 aaKnown RBP16.81■□□□□ 0.28
PTPA-219ENST00000435305 FMNL2Q96PY5 1086 aa16.81■□□□□ 0.28
PTPA-219ENST00000435305 SRP68Q9UHB9 627 aaKnown RBP16.81■□□□□ 0.28
PTPA-219ENST00000435305 UBR2Q8IWV8 1755 aa16.81■□□□□ 0.28
PTPA-219ENST00000435305 SIPA1L3O60292 1781 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 529.8 ms