RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 ABL2P42684 1182 aa9.16□□□□□ -0.94
PTPN4-205ENST00000433888 MARSP56192 900 aaKnown RBP9.16□□□□□ -0.94
PTPN4-205ENST00000433888 MCM6Q14566 821 aa9.16□□□□□ -0.94
PTPN4-205ENST00000433888 WASHC4Q2M389 1173 aa9.16□□□□□ -0.94
PTPN4-205ENST00000433888 ESCO1Q5FWF5 840 aa9.16□□□□□ -0.94
PTPN4-205ENST00000433888 ACDQ96AP0 544 aa9.16□□□□□ -0.94
PTPN4-205ENST00000433888 A0A1B0GTH6 734 aa9.15□□□□□ -0.94
PTPN4-205ENST00000433888 IRS1P35568 1242 aa9.15□□□□□ -0.94
PTPN4-205ENST00000433888 PPARGC1BQ86YN6 1023 aaKnown RBP9.15□□□□□ -0.94
PTPN4-205ENST00000433888 TRERF1Q96PN7 1200 aa9.15□□□□□ -0.94
PTPN4-205ENST00000433888 CFHR5Q9BXR6 569 aa9.15□□□□□ -0.94
PTPN4-205ENST00000433888 BCRP11274 1271 aa9.14□□□□□ -0.95
PTPN4-205ENST00000433888 MX2P20592 715 aa9.14□□□□□ -0.95
PTPN4-205ENST00000433888 SCNN1DP51172 638 aa9.14□□□□□ -0.95
PTPN4-205ENST00000433888 MAP3K10Q02779 954 aa9.14□□□□□ -0.95
PTPN4-205ENST00000433888 OXLD1Q5BKU9 147 aa9.14□□□□□ -0.95
PTPN4-205ENST00000433888 TMEM214Q6NUQ4 689 aaKnown RBP9.14□□□□□ -0.95
PTPN4-205ENST00000433888 SIRT1Q96EB6 747 aa9.14□□□□□ -0.95
PTPN4-205ENST00000433888 SCARF2Q96GP6 870 aaPredicted RBP9.14□□□□□ -0.95
PTPN4-205ENST00000433888 GPAMQ9HCL2 828 aa9.14□□□□□ -0.95
PTPN4-205ENST00000433888 MAP7D1Q3KQU3 841 aa9.13□□□□□ -0.95
PTPN4-205ENST00000433888 ENAMQ9NRM1 1142 aa9.13□□□□□ -0.95
PTPN4-205ENST00000433888 INHAP05111 366 aa9.12□□□□□ -0.95
PTPN4-205ENST00000433888 MSX1P28360 303 aa9.12□□□□□ -0.95
PTPN4-205ENST00000433888 GNASQ5JWF2 1037 aa9.12□□□□□ -0.95
PTPN4-205ENST00000433888 KANK3Q6NY19 840 aa9.12□□□□□ -0.95
PTPN4-205ENST00000433888 PLPP7Q8NBV4 271 aa9.12□□□□□ -0.95
PTPN4-205ENST00000433888 RHBDD1Q8TEB9 315 aa9.12□□□□□ -0.95
PTPN4-205ENST00000433888 LRRC4BQ9NT99 713 aa9.12□□□□□ -0.95
PTPN4-205ENST00000433888 COG6Q9Y2V7 657 aa9.12□□□□□ -0.95
PTPN4-205ENST00000433888 SOX11P35716 441 aa9.11□□□□□ -0.95
PTPN4-205ENST00000433888 LBRQ14739 615 aaKnown RBP9.11□□□□□ -0.95
PTPN4-205ENST00000433888 RUBCNLQ9H714 662 aa9.11□□□□□ -0.95
PTPN4-205ENST00000433888 CNTNAP5Q8WYK1 1306 aa9.1□□□□□ -0.95
PTPN4-205ENST00000433888 GTF2E1P29083 439 aaPredicted RBP9.1□□□□□ -0.95
PTPN4-205ENST00000433888 GDF10P55107 478 aa9.1□□□□□ -0.95
PTPN4-205ENST00000433888 SEMA3FQ13275 785 aa9.1□□□□□ -0.95
PTPN4-205ENST00000433888 TLR1Q15399 786 aa9.1□□□□□ -0.95
PTPN4-205ENST00000433888 NDFIP2Q9NV92 336 aa9.1□□□□□ -0.95
PTPN4-205ENST00000433888 NSFL1CQ9UNZ2 370 aaKnown RBP9.1□□□□□ -0.95
PTPN4-205ENST00000433888 DNMT3AQ9Y6K1 912 aaPredicted RBP9.1□□□□□ -0.95
PTPN4-205ENST00000433888 TMEM229AB2RXF0 380 aa9.09□□□□□ -0.95
PTPN4-205ENST00000433888 PIK3CDO00329 1044 aa9.09□□□□□ -0.95
PTPN4-205ENST00000433888 OIP5O43482 229 aa9.09□□□□□ -0.95
PTPN4-205ENST00000433888 ZNF295-AS1Q8N0V1 137 aa9.09□□□□□ -0.95
PTPN4-205ENST00000433888 CRISPLD1Q9H336 500 aa9.09□□□□□ -0.95
PTPN4-205ENST00000433888 MAP2K3P46734 347 aa9.08□□□□□ -0.96
PTPN4-205ENST00000433888 SMTNP53814 917 aa9.08□□□□□ -0.96
PTPN4-205ENST00000433888 KLRG1Q96E93 195 aa9.08□□□□□ -0.96
PTPN4-205ENST00000433888 SLC4A9Q96Q91 983 aa9.08□□□□□ -0.96
PTPN4-205ENST00000433888 ALG2Q9H553 416 aa9.08□□□□□ -0.96
PTPN4-205ENST00000433888 PCDHGA11Q9Y5H2 935 aa9.08□□□□□ -0.96
PTPN4-205ENST00000433888 C1orf229Q6ZS94 237 aaPredicted RBP9.07□□□□□ -0.96
PTPN4-205ENST00000433888 OXCT2Q9BYC2 517 aaPredicted RBP9.07□□□□□ -0.96
PTPN4-205ENST00000433888 DNAAF2Q9NVR5 837 aaKnown RBP9.07□□□□□ -0.96
PTPN4-205ENST00000433888 C2CD2LO14523 706 aa9.06□□□□□ -0.96
PTPN4-205ENST00000433888 BNIP3LO60238 219 aa9.06□□□□□ -0.96
PTPN4-205ENST00000433888 CSB-PGBD3P0DP91 1061 aa9.06□□□□□ -0.96
PTPN4-205ENST00000433888 SUZ12Q15022 739 aaKnown RBP9.06□□□□□ -0.96
PTPN4-205ENST00000433888 MTFR1Q15390 333 aa9.06□□□□□ -0.96
PTPN4-205ENST00000433888 PGBD3Q8N328 593 aa9.06□□□□□ -0.96
PTPN4-205ENST00000433888 NEDD1Q8NHV4 660 aa9.06□□□□□ -0.96
PTPN4-205ENST00000433888 IQSEC3Q9UPP2 1182 aaPredicted RBP9.06□□□□□ -0.96
PTPN4-205ENST00000433888 PHF24Q9UPV7 400 aa9.06□□□□□ -0.96
PTPN4-205ENST00000433888 LOC100996750A0A140TA64 210 aa9.05□□□□□ -0.96
PTPN4-205ENST00000433888 ATP4AP20648 1035 aa9.05□□□□□ -0.96
PTPN4-205ENST00000433888 PLA2G4AP47712 749 aa9.05□□□□□ -0.96
PTPN4-205ENST00000433888 BEND7Q8N7W2 519 aaPredicted RBP9.05□□□□□ -0.96
PTPN4-205ENST00000433888 KRTAP4-6Q9BYQ5 205 aa9.05□□□□□ -0.96
PTPN4-205ENST00000433888 ATXN7L1Q9ULK2 861 aaPredicted RBP9.05□□□□□ -0.96
PTPN4-205ENST00000433888 SHISA8B8ZZ34 492 aa9.04□□□□□ -0.96
PTPN4-205ENST00000433888 EFHC2Q5JST6 749 aa9.04□□□□□ -0.96
PTPN4-205ENST00000433888 ABHD17AQ96GS6 310 aa9.04□□□□□ -0.96
PTPN4-205ENST00000433888 POM121Q96HA1 1249 aa9.04□□□□□ -0.96
PTPN4-205ENST00000433888 CDK2AP1O14519 115 aa9.03□□□□□ -0.96
PTPN4-205ENST00000433888 CTBSQ01459 385 aa9.03□□□□□ -0.96
PTPN4-205ENST00000433888 TBC1D9Q6ZT07 1266 aa9.03□□□□□ -0.96
PTPN4-205ENST00000433888 C1orf216Q8TAB5 229 aa9.03□□□□□ -0.96
PTPN4-205ENST00000433888 NIFKQ9BYG3 293 aaKnown RBP9.03□□□□□ -0.96
PTPN4-205ENST00000433888 SERTAD1Q9UHV2 236 aa9.03□□□□□ -0.96
PTPN4-205ENST00000433888 HCN2Q9UL51 889 aa9.03□□□□□ -0.96
PTPN4-205ENST00000433888 USP3Q9Y6I4 520 aa9.03□□□□□ -0.96
PTPN4-205ENST00000433888 A6NJY4 79 aa9.02□□□□□ -0.97
PTPN4-205ENST00000433888 PHF20L1A8MW92 1017 aa9.02□□□□□ -0.97
PTPN4-205ENST00000433888 IGHA1P01876 353 aa9.02□□□□□ -0.97
PTPN4-205ENST00000433888 ITGB2P05107 769 aa9.02□□□□□ -0.97
PTPN4-205ENST00000433888 FOXK2Q01167 660 aa9.02□□□□□ -0.97
PTPN4-205ENST00000433888 NFATC2IPQ8NCF5 419 aa9.02□□□□□ -0.97
PTPN4-205ENST00000433888 GALNT6Q8NCL4 622 aa9.02□□□□□ -0.97
PTPN4-205ENST00000433888 DCAF5Q96JK2 942 aa9.02□□□□□ -0.97
PTPN4-205ENST00000433888 ZCCHC2Q9C0B9 1178 aaKnown RBP9.02□□□□□ -0.97
PTPN4-205ENST00000433888 LZTS3O60299 673 aaPredicted RBP9.01□□□□□ -0.97
PTPN4-205ENST00000433888 HOXB4P17483 251 aaPredicted RBP9.01□□□□□ -0.97
PTPN4-205ENST00000433888 FGFR3P22607 806 aa9.01□□□□□ -0.97
PTPN4-205ENST00000433888 SNRPNP63162 240 aaKnown RBP9.01□□□□□ -0.97
PTPN4-205ENST00000433888 GPAT2Q6NUI2 795 aa9.01□□□□□ -0.97
PTPN4-205ENST00000433888 NLRP8Q86W28 1048 aa9.01□□□□□ -0.97
PTPN4-205ENST00000433888 GDF2Q9UK05 429 aaPredicted RBP9.01□□□□□ -0.97
PTPN4-205ENST00000433888 SKIP12755 728 aa9□□□□□ -0.97
PTPN4-205ENST00000433888 EML3Q32P44 896 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms