RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 GDF9O60383 454 aa9.82□□□□□ -0.84
COL17A1-204ENST00000433822 CFAP70Q5T0N1 1121 aa9.82□□□□□ -0.84
COL17A1-204ENST00000433822 ARHGEF28Q8N1W1 1705 aaKnown RBP9.82□□□□□ -0.84
COL17A1-204ENST00000433822 CC2D1BQ5T0F9 858 aaKnown RBP9.81□□□□□ -0.84
COL17A1-204ENST00000433822 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.8□□□□□ -0.84
COL17A1-204ENST00000433822 IRX6P78412 446 aaPredicted RBP9.8□□□□□ -0.84
COL17A1-204ENST00000433822 SLC6A16Q9GZN6 736 aa9.8□□□□□ -0.84
COL17A1-204ENST00000433822 TMEM131LA2VDJ0 1609 aa9.79□□□□□ -0.84
COL17A1-204ENST00000433822 NUTM2FA1L443 756 aa9.79□□□□□ -0.84
COL17A1-204ENST00000433822 POTECB2RU33 542 aa9.79□□□□□ -0.84
COL17A1-204ENST00000433822 TNFRSF10AO00220 468 aa9.79□□□□□ -0.84
COL17A1-204ENST00000433822 SLC10A3P09131 477 aa9.79□□□□□ -0.84
COL17A1-204ENST00000433822 WDR43Q15061 677 aaKnown RBP eCLIP9.79□□□□□ -0.84
COL17A1-204ENST00000433822 CCDC136Q96JN2 1154 aa9.79□□□□□ -0.84
COL17A1-204ENST00000433822 CLTCQ00610 1675 aaKnown RBP9.79□□□□□ -0.84
COL17A1-204ENST00000433822 CEP170BQ9Y4F5 1589 aaPredicted RBP9.79□□□□□ -0.84
COL17A1-204ENST00000433822 STRCP1A6NGW2 1772 aa9.78□□□□□ -0.84
COL17A1-204ENST00000433822 FAM161AQ3B820 660 aa9.78□□□□□ -0.84
COL17A1-204ENST00000433822 B4GALNT3Q6L9W6 998 aa9.78□□□□□ -0.84
COL17A1-204ENST00000433822 ANP32EQ9BTT0 268 aa9.78□□□□□ -0.84
COL17A1-204ENST00000433822 MED14O60244 1454 aa9.78□□□□□ -0.84
COL17A1-204ENST00000433822 TRMT2AQ8IZ69 625 aaKnown RBP9.77□□□□□ -0.85
COL17A1-204ENST00000433822 ADAMTS8Q9UP79 889 aa9.77□□□□□ -0.85
COL17A1-204ENST00000433822 DLC1Q96QB1 1528 aa9.77□□□□□ -0.85
COL17A1-204ENST00000433822 ANKRD36BQ8N2N9 1353 aa9.76□□□□□ -0.85
COL17A1-204ENST00000433822 FCHSD2O94868 740 aa9.76□□□□□ -0.85
COL17A1-204ENST00000433822 GGT6Q6P531 493 aa9.76□□□□□ -0.85
COL17A1-204ENST00000433822 SCUBE3Q8IX30 993 aa9.76□□□□□ -0.85
COL17A1-204ENST00000433822 EVC2Q86UK5 1308 aa9.76□□□□□ -0.85
COL17A1-204ENST00000433822 TULP4Q9NRJ4 1543 aa9.76□□□□□ -0.85
COL17A1-204ENST00000433822 OATP04181 439 aa9.75□□□□□ -0.85
COL17A1-204ENST00000433822 MS4A1P11836 297 aa9.75□□□□□ -0.85
COL17A1-204ENST00000433822 PLA2G2CQ5R387 149 aa9.75□□□□□ -0.85
COL17A1-204ENST00000433822 DUSP27Q5VZP5 1158 aa9.75□□□□□ -0.85
COL17A1-204ENST00000433822 LMOD2Q6P5Q4 547 aa9.75□□□□□ -0.85
COL17A1-204ENST00000433822 KCNV2Q8TDN2 545 aa9.75□□□□□ -0.85
COL17A1-204ENST00000433822 CGNL1Q0VF96 1302 aa9.75□□□□□ -0.85
COL17A1-204ENST00000433822 ATAD2Q6PL18 1390 aa9.75□□□□□ -0.85
COL17A1-204ENST00000433822 PLEKHH1Q9ULM0 1364 aa9.75□□□□□ -0.85
COL17A1-204ENST00000433822 SHPRHQ149N8 1683 aa9.74□□□□□ -0.85
COL17A1-204ENST00000433822 CFAP65Q6ZU64 1925 aaKnown RBP9.74□□□□□ -0.85
COL17A1-204ENST00000433822 CPS1P31327 1500 aa9.74□□□□□ -0.85
COL17A1-204ENST00000433822 TCERG1O14776 1098 aaKnown RBP9.74□□□□□ -0.85
COL17A1-204ENST00000433822 POTEAQ6S8J7 498 aa9.74□□□□□ -0.85
COL17A1-204ENST00000433822 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.74□□□□□ -0.85
COL17A1-204ENST00000433822 CARD14Q9BXL6 1004 aa9.74□□□□□ -0.85
COL17A1-204ENST00000433822 AAASQ9NRG9 546 aa9.74□□□□□ -0.85
COL17A1-204ENST00000433822 NSD3Q9BZ95 1437 aa9.73□□□□□ -0.85
COL17A1-204ENST00000433822 ANKRD26Q9UPS8 1709 aa9.73□□□□□ -0.85
COL17A1-204ENST00000433822 NKTRP30414 1462 aaKnown RBP9.73□□□□□ -0.85
COL17A1-204ENST00000433822 TOM1O60784 492 aa9.73□□□□□ -0.85
COL17A1-204ENST00000433822 PXYLP1Q8TE99 480 aa9.73□□□□□ -0.85
COL17A1-204ENST00000433822 SPSB2Q99619 263 aa9.73□□□□□ -0.85
COL17A1-204ENST00000433822 E9PSI1 815 aa9.72□□□□□ -0.85
COL17A1-204ENST00000433822 ST8SIA5O15466 376 aa9.72□□□□□ -0.85
COL17A1-204ENST00000433822 SLFN5Q08AF3 891 aa9.72□□□□□ -0.85
COL17A1-204ENST00000433822 CNGB1Q14028 1251 aaPredicted RBP9.72□□□□□ -0.85
COL17A1-204ENST00000433822 MYO5BQ9ULV0 1848 aa9.72□□□□□ -0.85
COL17A1-204ENST00000433822 AAMPQ13685 434 aa9.71□□□□□ -0.86
COL17A1-204ENST00000433822 IDI1Q13907 227 aa9.71□□□□□ -0.86
COL17A1-204ENST00000433822 CCDC27Q2M243 656 aa9.71□□□□□ -0.86
COL17A1-204ENST00000433822 TREML4Q6UXN2 200 aa9.71□□□□□ -0.86
COL17A1-204ENST00000433822 PKD2L1Q9P0L9 805 aa9.71□□□□□ -0.86
COL17A1-204ENST00000433822 ABCC11Q96J66 1382 aa9.71□□□□□ -0.86
COL17A1-204ENST00000433822 ADGRB2O60241 1585 aa9.71□□□□□ -0.86
COL17A1-204ENST00000433822 XIRP1Q702N8 1843 aaKnown RBP9.7□□□□□ -0.86
COL17A1-204ENST00000433822 RPIAP49247 311 aa9.7□□□□□ -0.86
COL17A1-204ENST00000433822 FOXC1Q12948 553 aa9.7□□□□□ -0.86
COL17A1-204ENST00000433822 PUS10Q3MIT2 529 aaKnown RBP9.7□□□□□ -0.86
COL17A1-204ENST00000433822 TRAK1Q9UPV9 953 aa9.7□□□□□ -0.86
COL17A1-204ENST00000433822 CRIPAKQ8N1N5 446 aa9.69□□□□□ -0.86
COL17A1-204ENST00000433822 EXOC6Q8TAG9 804 aa9.69□□□□□ -0.86
COL17A1-204ENST00000433822 YTHDC2Q9H6S0 1430 aaKnown RBP9.69□□□□□ -0.86
COL17A1-204ENST00000433822 KNDC1Q76NI1 1749 aa9.68□□□□□ -0.86
COL17A1-204ENST00000433822 CD2BP2O95400 341 aaKnown RBP9.68□□□□□ -0.86
COL17A1-204ENST00000433822 WDR63Q8IWG1 891 aa9.68□□□□□ -0.86
COL17A1-204ENST00000433822 CFAP53Q96M91 514 aa9.68□□□□□ -0.86
COL17A1-204ENST00000433822 CDC42BPGQ6DT37 1551 aa9.67□□□□□ -0.86
COL17A1-204ENST00000433822 A2ML1A8K2U0 1454 aa9.67□□□□□ -0.86
COL17A1-204ENST00000433822 ATP7BP35670 1465 aa9.67□□□□□ -0.86
COL17A1-204ENST00000433822 ZMYM3Q14202 1370 aa9.67□□□□□ -0.86
COL17A1-204ENST00000433822 CT47B1P0C2W7 299 aaPredicted RBP9.67□□□□□ -0.86
COL17A1-204ENST00000433822 PDE3AQ14432 1141 aa9.67□□□□□ -0.86
COL17A1-204ENST00000433822 METTL3Q86U44 580 aaKnown RBP9.67□□□□□ -0.86
COL17A1-204ENST00000433822 MORC1Q86VD1 984 aa9.67□□□□□ -0.86
COL17A1-204ENST00000433822 RUNDC1Q96C34 613 aa9.67□□□□□ -0.86
COL17A1-204ENST00000433822 ESF1Q9H501 851 aaKnown RBP9.67□□□□□ -0.86
COL17A1-204ENST00000433822 NLRP1Q9C000 1473 aa9.66□□□□□ -0.86
COL17A1-204ENST00000433822 KDM2BQ8NHM5 1336 aa9.66□□□□□ -0.86
COL17A1-204ENST00000433822 HIC1Q14526 733 aa9.66□□□□□ -0.86
COL17A1-204ENST00000433822 LCE2AQ5TA79 106 aaPredicted RBP9.66□□□□□ -0.86
COL17A1-204ENST00000433822 CENPQQ7L2Z9 268 aaPredicted RBP9.66□□□□□ -0.86
COL17A1-204ENST00000433822 SIRT1Q96EB6 747 aa9.66□□□□□ -0.86
COL17A1-204ENST00000433822 SLC12A5Q9H2X9 1139 aa9.66□□□□□ -0.86
COL17A1-204ENST00000433822 TECPR2O15040 1411 aa9.65□□□□□ -0.86
COL17A1-204ENST00000433822 APAF1O14727 1248 aa9.65□□□□□ -0.86
COL17A1-204ENST00000433822 AVPP01185 164 aa9.65□□□□□ -0.86
COL17A1-204ENST00000433822 TOR4AQ9NXH8 423 aa9.65□□□□□ -0.86
COL17A1-204ENST00000433822 TERF2IPQ9NYB0 399 aa9.65□□□□□ -0.86
COL17A1-204ENST00000433822 COL3A1P02461 1466 aaPredicted RBP9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms