RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 LARP1Q6PKG0 1096 aaKnown RBP10.51□□□□□ -0.73
HDAC9-213ENST00000433709 LARGE2Q8N3Y3 721 aa10.51□□□□□ -0.73
HDAC9-213ENST00000433709 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.51□□□□□ -0.73
HDAC9-213ENST00000433709 KIFC2Q96AC6 838 aa10.51□□□□□ -0.73
HDAC9-213ENST00000433709 SERTAD1Q9UHV2 236 aa10.51□□□□□ -0.73
HDAC9-213ENST00000433709 DNMT3LQ9UJW3 386 aa10.51□□□□□ -0.73
HDAC9-213ENST00000433709 PTK7Q13308 1070 aa10.5□□□□□ -0.73
HDAC9-213ENST00000433709 HRH3Q9Y5N1 445 aa10.5□□□□□ -0.73
HDAC9-213ENST00000433709 USP17L15C9J2P7 530 aa10.49□□□□□ -0.73
HDAC9-213ENST00000433709 USP17L10C9JJH3 530 aa10.49□□□□□ -0.73
HDAC9-213ENST00000433709 USP17L13C9JLJ4 530 aa10.49□□□□□ -0.73
HDAC9-213ENST00000433709 USP17L12C9JPN9 530 aa10.49□□□□□ -0.73
HDAC9-213ENST00000433709 USP17L11C9JVI0 530 aa10.49□□□□□ -0.73
HDAC9-213ENST00000433709 USP17L21D6R901 530 aa10.49□□□□□ -0.73
HDAC9-213ENST00000433709 USP17L18D6R9N7 530 aa10.49□□□□□ -0.73
HDAC9-213ENST00000433709 USP17L22D6RA61 530 aa10.49□□□□□ -0.73
HDAC9-213ENST00000433709 USP17L17D6RBQ6 530 aa10.49□□□□□ -0.73
HDAC9-213ENST00000433709 USP17L19D6RCP7 530 aa10.49□□□□□ -0.73
HDAC9-213ENST00000433709 USP17L20D6RJB6 530 aa10.49□□□□□ -0.73
HDAC9-213ENST00000433709 DKK1O94907 266 aa10.49□□□□□ -0.73
HDAC9-213ENST00000433709 RNF144AP50876 292 aaPredicted RBP10.49□□□□□ -0.73
HDAC9-213ENST00000433709 CENPCQ03188 943 aa10.49□□□□□ -0.73
HDAC9-213ENST00000433709 USP17L24Q0WX57 530 aa10.49□□□□□ -0.73
HDAC9-213ENST00000433709 ZNF787Q6DD87 383 aa10.49□□□□□ -0.73
HDAC9-213ENST00000433709 RNF217Q8TC41 542 aa10.49□□□□□ -0.73
HDAC9-213ENST00000433709 ZNF358Q9NW07 568 aa10.49□□□□□ -0.73
HDAC9-213ENST00000433709 MAN1A2O60476 641 aa10.48□□□□□ -0.73
HDAC9-213ENST00000433709 PBXIP1Q96AQ6 731 aa10.48□□□□□ -0.73
HDAC9-213ENST00000433709 FAM196BA6NMK8 535 aa10.47□□□□□ -0.73
HDAC9-213ENST00000433709 SFI1A8K8P3 1242 aa10.47□□□□□ -0.73
HDAC9-213ENST00000433709 WASLO00401 505 aaPredicted RBP10.47□□□□□ -0.73
HDAC9-213ENST00000433709 SLC27A3Q5K4L6 730 aa10.47□□□□□ -0.73
HDAC9-213ENST00000433709 SIX5Q8N196 739 aa10.47□□□□□ -0.73
HDAC9-213ENST00000433709 GRIP2Q9C0E4 1043 aa10.47□□□□□ -0.73
HDAC9-213ENST00000433709 GPC1P35052 558 aa10.46□□□□□ -0.73
HDAC9-213ENST00000433709 DPYDQ12882 1025 aa10.46□□□□□ -0.73
HDAC9-213ENST00000433709 PRICKLE2Q7Z3G6 844 aa10.46□□□□□ -0.73
HDAC9-213ENST00000433709 SLC4A9Q96Q91 983 aa10.46□□□□□ -0.73
HDAC9-213ENST00000433709 FHDC1Q9C0D6 1143 aaPredicted RBP10.46□□□□□ -0.73
HDAC9-213ENST00000433709 SMTNP53814 917 aa10.45□□□□□ -0.74
HDAC9-213ENST00000433709 TLR1Q15399 786 aa10.45□□□□□ -0.74
HDAC9-213ENST00000433709 ANKMY2Q8IV38 441 aa10.45□□□□□ -0.74
HDAC9-213ENST00000433709 ARXQ96QS3 562 aa10.45□□□□□ -0.74
HDAC9-213ENST00000433709 RBM19Q9Y4C8 960 aaKnown RBP10.45□□□□□ -0.74
HDAC9-213ENST00000433709 LYSMD3Q7Z3D4 306 aa10.44□□□□□ -0.74
HDAC9-213ENST00000433709 TNS4Q8IZW8 715 aa10.44□□□□□ -0.74
HDAC9-213ENST00000433709 ZSCAN10Q96SZ4 725 aaPredicted RBP10.44□□□□□ -0.74
HDAC9-213ENST00000433709 NOVA2Q9UNW9 492 aaKnown RBP10.44□□□□□ -0.74
HDAC9-213ENST00000433709 BACH1O14867 736 aa10.43□□□□□ -0.74
HDAC9-213ENST00000433709 ATG7O95352 703 aa10.43□□□□□ -0.74
HDAC9-213ENST00000433709 SEC13P55735 322 aa10.43□□□□□ -0.74
HDAC9-213ENST00000433709 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.43□□□□□ -0.74
HDAC9-213ENST00000433709 TSEN2Q8NCE0 465 aaKnown RBP10.43□□□□□ -0.74
HDAC9-213ENST00000433709 A6NJY4 79 aa10.42□□□□□ -0.74
HDAC9-213ENST00000433709 RHOQP17081 205 aa10.42□□□□□ -0.74
HDAC9-213ENST00000433709 POU4F2Q12837 409 aa10.42□□□□□ -0.74
HDAC9-213ENST00000433709 ZMIZ1Q9ULJ6 1067 aa10.42□□□□□ -0.74
HDAC9-213ENST00000433709 USP3Q9Y6I4 520 aa10.42□□□□□ -0.74
HDAC9-213ENST00000433709 EIF4G1Q04637 1599 aaKnown RBP10.41□□□□□ -0.74
HDAC9-213ENST00000433709 LGR5O75473 907 aa10.41□□□□□ -0.74
HDAC9-213ENST00000433709 PPP1R15AO75807 674 aaPredicted RBP10.41□□□□□ -0.74
HDAC9-213ENST00000433709 TMEM214Q6NUQ4 689 aaKnown RBP10.41□□□□□ -0.74
HDAC9-213ENST00000433709 FAM200AQ8TCP9 573 aa10.41□□□□□ -0.74
HDAC9-213ENST00000433709 EPHA4P54764 986 aa10.4□□□□□ -0.74
HDAC9-213ENST00000433709 ELOAQ14241 798 aaKnown RBP10.4□□□□□ -0.74
HDAC9-213ENST00000433709 MTFR1Q15390 333 aa10.4□□□□□ -0.74
HDAC9-213ENST00000433709 PPARGC1BQ86YN6 1023 aaKnown RBP10.4□□□□□ -0.74
HDAC9-213ENST00000433709 STK32AQ8WU08 396 aa10.4□□□□□ -0.74
HDAC9-213ENST00000433709 CECR2Q9BXF3 1484 aa10.39□□□□□ -0.75
HDAC9-213ENST00000433709 M0R2N6 131 aa10.39□□□□□ -0.75
HDAC9-213ENST00000433709 CDK2AP1O14519 115 aa10.39□□□□□ -0.75
HDAC9-213ENST00000433709 TBCELQ5QJ74 424 aa10.39□□□□□ -0.75
HDAC9-213ENST00000433709 SCHIP1Q9P0W5 487 aaPredicted RBP10.39□□□□□ -0.75
HDAC9-213ENST00000433709 CC2D2AQ9P2K1 1620 aa10.39□□□□□ -0.75
HDAC9-213ENST00000433709 SPATA31C2B4DYI2 1134 aa10.38□□□□□ -0.75
HDAC9-213ENST00000433709 PHKA2P46019 1235 aa10.38□□□□□ -0.75
HDAC9-213ENST00000433709 PTSQ03393 145 aa10.38□□□□□ -0.75
HDAC9-213ENST00000433709 NBPF10Q6P3W6 841 aaKnown RBP10.38□□□□□ -0.75
HDAC9-213ENST00000433709 NBPF15Q8N660 670 aa10.38□□□□□ -0.75
HDAC9-213ENST00000433709 HINFPQ9BQA5 517 aa10.38□□□□□ -0.75
HDAC9-213ENST00000433709 IQSEC3Q9UPP2 1182 aaPredicted RBP10.38□□□□□ -0.75
HDAC9-213ENST00000433709 GTF2E1P29083 439 aaPredicted RBP10.37□□□□□ -0.75
HDAC9-213ENST00000433709 FOXK2Q01167 660 aa10.37□□□□□ -0.75
HDAC9-213ENST00000433709 C4orf17Q53FE4 359 aa10.37□□□□□ -0.75
HDAC9-213ENST00000433709 GNASQ5JWF2 1037 aa10.37□□□□□ -0.75
HDAC9-213ENST00000433709 TAS1R3Q7RTX0 852 aa10.37□□□□□ -0.75
HDAC9-213ENST00000433709 ACIN1Q9UKV3 1341 aaKnown RBP10.36□□□□□ -0.75
HDAC9-213ENST00000433709 TMEM164Q5U3C3 297 aa10.36□□□□□ -0.75
HDAC9-213ENST00000433709 SLC9A9Q8IVB4 645 aa10.36□□□□□ -0.75
HDAC9-213ENST00000433709 GAS2L2Q8NHY3 880 aa10.36□□□□□ -0.75
HDAC9-213ENST00000433709 RHBDD1Q8TEB9 315 aa10.36□□□□□ -0.75
HDAC9-213ENST00000433709 TSPAN10Q9H1Z9 355 aaPredicted RBP10.36□□□□□ -0.75
HDAC9-213ENST00000433709 SENP3-EIF4A1A0A087X0R7 540 aa10.35□□□□□ -0.75
HDAC9-213ENST00000433709 FAM69CQ0P6D2 419 aa10.35□□□□□ -0.75
HDAC9-213ENST00000433709 ZNF295-AS1Q8N0V1 137 aa10.35□□□□□ -0.75
HDAC9-213ENST00000433709 SLC35F4A4IF30 521 aa10.34□□□□□ -0.75
HDAC9-213ENST00000433709 CABP1Q9NZU7 370 aa10.34□□□□□ -0.75
HDAC9-213ENST00000433709 PARP3Q9Y6F1 533 aa10.34□□□□□ -0.75
HDAC9-213ENST00000433709 PLA2G4AP47712 749 aa10.33□□□□□ -0.76
HDAC9-213ENST00000433709 WDR44Q5JSH3 913 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms