RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 PUS7Q96PZ0 661 aaKnown RBP22.34■■□□□ 1.17
NUP50-209ENST00000432340 ATP6V1AP38606 617 aa22.33■■□□□ 1.17
NUP50-209ENST00000432340 A0A1W2PP64 1363 aa22.33■■□□□ 1.17
NUP50-209ENST00000432340 SMIM5Q71RC9 77 aa22.32■■□□□ 1.16
NUP50-209ENST00000432340 TMOD3Q9NYL9 352 aa22.32■■□□□ 1.16
NUP50-209ENST00000432340 USHBP1Q8N6Y0 703 aa22.31■■□□□ 1.16
NUP50-209ENST00000432340 L3MBTL2Q969R5 705 aa22.31■■□□□ 1.16
NUP50-209ENST00000432340 PRDM10Q9NQV6 1147 aa22.31■■□□□ 1.16
NUP50-209ENST00000432340 CYP27B1O15528 508 aa22.3■■□□□ 1.16
NUP50-209ENST00000432340 RFC4P35249 363 aa22.29■■□□□ 1.16
NUP50-209ENST00000432340 NKX1-1Q15270 411 aaPredicted RBP22.29■■□□□ 1.16
NUP50-209ENST00000432340 SPG7Q9UQ90 795 aa22.29■■□□□ 1.16
NUP50-209ENST00000432340 AIDAQ96BJ3 306 aa22.27■■□□□ 1.16
NUP50-209ENST00000432340 TAF1LQ8IZX4 1826 aa22.27■■□□□ 1.15
NUP50-209ENST00000432340 TOGARAM1Q9Y4F4 1720 aa22.26■■□□□ 1.15
NUP50-209ENST00000432340 GLTPD2A6NH11 291 aa22.26■■□□□ 1.15
NUP50-209ENST00000432340 KCNA3P22001 575 aa22.26■■□□□ 1.15
NUP50-209ENST00000432340 UBR3Q6ZT12 1888 aa22.26■■□□□ 1.15
NUP50-209ENST00000432340 ITPK1Q13572 414 aa22.25■■□□□ 1.15
NUP50-209ENST00000432340 TNRC6CQ9HCJ0 1690 aaKnown RBP22.24■■□□□ 1.15
NUP50-209ENST00000432340 RC3H1Q5TC82 1133 aaKnown RBP22.24■■□□□ 1.15
NUP50-209ENST00000432340 CREBZFQ9NS37 354 aa22.24■■□□□ 1.15
NUP50-209ENST00000432340 KIF24Q5T7B8 1368 aa22.24■■□□□ 1.15
NUP50-209ENST00000432340 SLC24A1O60721 1099 aa22.23■■□□□ 1.15
NUP50-209ENST00000432340 GYS1P13807 737 aa22.23■■□□□ 1.15
NUP50-209ENST00000432340 LMNB1P20700 586 aa22.23■■□□□ 1.15
NUP50-209ENST00000432340 CTCFP49711 727 aaPredicted RBP22.23■■□□□ 1.15
NUP50-209ENST00000432340 RRS1Q15050 365 aaKnown RBP22.23■■□□□ 1.15
NUP50-209ENST00000432340 INSRP06213 1382 aa22.23■■□□□ 1.15
NUP50-209ENST00000432340 ARHGEF1Q92888 912 aaKnown RBP22.22■■□□□ 1.15
NUP50-209ENST00000432340 KIF13BQ9NQT8 1826 aa22.22■■□□□ 1.15
NUP50-209ENST00000432340 DPY19L2Q6NUT2 758 aa22.21■■□□□ 1.15
NUP50-209ENST00000432340 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.21■■□□□ 1.154e-6■□□□□ 11.2
NUP50-209ENST00000432340 ASAP1Q9ULH1 1129 aa22.21■■□□□ 1.15
NUP50-209ENST00000432340 FLT4P35916 1363 aa22.2■■□□□ 1.14
NUP50-209ENST00000432340 RPS6KA4O75676 772 aa22.19■■□□□ 1.14
NUP50-209ENST00000432340 FBLN1P23142 703 aa22.19■■□□□ 1.14
NUP50-209ENST00000432340 CARD11Q9BXL7 1154 aa22.19■■□□□ 1.14
NUP50-209ENST00000432340 CNTNAP4Q9C0A0 1308 aa22.18■■□□□ 1.14
NUP50-209ENST00000432340 FAM161AQ3B820 660 aa22.17■■□□□ 1.14
NUP50-209ENST00000432340 HSP90AB2PQ58FF8 381 aa22.17■■□□□ 1.14
NUP50-209ENST00000432340 IFNL2Q8IZJ0 200 aa22.17■■□□□ 1.14
NUP50-209ENST00000432340 ATG3Q9NT62 314 aa22.17■■□□□ 1.14
NUP50-209ENST00000432340 MKRN1Q9UHC7 482 aaKnown RBP22.17■■□□□ 1.14
NUP50-209ENST00000432340 KIAA1551Q9HCM1 1747 aa22.17■■□□□ 1.14
NUP50-209ENST00000432340 PCNTO95613 3336 aa22.16■■□□□ 1.14
NUP50-209ENST00000432340 FOXN1O15353 648 aa22.16■■□□□ 1.14
NUP50-209ENST00000432340 N4BP2Q86UW6 1770 aaPredicted RBP22.16■■□□□ 1.14
NUP50-209ENST00000432340 C4AP0C0L4 1744 aa22.15■■□□□ 1.14
NUP50-209ENST00000432340 PKD1L3Q7Z443 1732 aa22.15■■□□□ 1.14
NUP50-209ENST00000432340 KDM6AO15550 1401 aaPredicted RBP22.14■■□□□ 1.13
NUP50-209ENST00000432340 CHADLQ6NUI6 762 aa22.13■■□□□ 1.13
NUP50-209ENST00000432340 RBM42Q9BTD8 480 aaKnown RBP22.13■■□□□ 1.13
NUP50-209ENST00000432340 CHRNA5P30532 468 aa22.12■■□□□ 1.13
NUP50-209ENST00000432340 MLLT1Q03111 559 aaPredicted RBP22.12■■□□□ 1.13
NUP50-209ENST00000432340 KDRP35968 1356 aa22.12■■□□□ 1.13
NUP50-209ENST00000432340 ARFGEF1Q9Y6D6 1849 aa22.11■■□□□ 1.13
NUP50-209ENST00000432340 ABHD8Q96I13 439 aa22.11■■□□□ 1.13
NUP50-209ENST00000432340 CNTNAP1P78357 1384 aa22.11■■□□□ 1.13
NUP50-209ENST00000432340 RASSF7Q02833 373 aa22.1■■□□□ 1.13
NUP50-209ENST00000432340 ERVV-2B6SEH9 535 aa22.09■■□□□ 1.13
NUP50-209ENST00000432340 FYB1O15117 783 aa22.09■■□□□ 1.13
NUP50-209ENST00000432340 HSP90AB1P08238 724 aaKnown RBP22.09■■□□□ 1.13
NUP50-209ENST00000432340 PHKG2P15735 406 aa22.09■■□□□ 1.13
NUP50-209ENST00000432340 GGNBP2Q9H3C7 697 aa22.09■■□□□ 1.13
NUP50-209ENST00000432340 MAP2P11137 1827 aaKnown RBP22.08■■□□□ 1.13
NUP50-209ENST00000432340 TTLL6Q8N841 843 aa22.08■■□□□ 1.13
NUP50-209ENST00000432340 USP42Q9H9J4 1324 aaKnown RBP22.07■■□□□ 1.12
NUP50-209ENST00000432340 RGPD2P0DJD1 1756 aa22.07■■□□□ 1.12
NUP50-209ENST00000432340 DDR1Q08345 913 aa22.06■■□□□ 1.12
NUP50-209ENST00000432340 FKBP8Q14318 412 aa22.06■■□□□ 1.12
NUP50-209ENST00000432340 TONSLQ96HA7 1378 aa22.06■■□□□ 1.12
NUP50-209ENST00000432340 BRCA1P38398 1863 aaKnown RBP22.05■■□□□ 1.12
NUP50-209ENST00000432340 LBX1P52954 281 aa22.05■■□□□ 1.12
NUP50-209ENST00000432340 WBP1LQ9NX94 342 aa22.05■■□□□ 1.12
NUP50-209ENST00000432340 ITGB4P16144 1822 aa22.04■■□□□ 1.12
NUP50-209ENST00000432340 ZPR1O75312 459 aa22.04■■□□□ 1.12
NUP50-209ENST00000432340 NCAPD2Q15021 1401 aa22.04■■□□□ 1.12
NUP50-209ENST00000432340 IQCA1LA6NCM1 817 aa22.03■■□□□ 1.12
NUP50-209ENST00000432340 POLRMTO00411 1230 aaKnown RBP22.03■■□□□ 1.12
NUP50-209ENST00000432340 SLC4A9Q96Q91 983 aa22.03■■□□□ 1.12
NUP50-209ENST00000432340 POTECB2RU33 542 aa22.02■■□□□ 1.12
NUP50-209ENST00000432340 MAP2K1Q02750 393 aaPredicted RBP22.02■■□□□ 1.12
NUP50-209ENST00000432340 NEUROD1Q13562 356 aa22.02■■□□□ 1.12
NUP50-209ENST00000432340 ERFEQ4G0M1 354 aa22.02■■□□□ 1.12
NUP50-209ENST00000432340 TMEM88BA6NKF7 163 aa22.01■■□□□ 1.11
NUP50-209ENST00000432340 TM4SF1P30408 202 aa22.01■■□□□ 1.11
NUP50-209ENST00000432340 CRKLP46109 303 aaKnown RBP22.01■■□□□ 1.11
NUP50-209ENST00000432340 RGS19P49795 217 aa22.01■■□□□ 1.11
NUP50-209ENST00000432340 SRP68Q9UHB9 627 aaKnown RBP22.01■■□□□ 1.11
NUP50-209ENST00000432340 H0YIN7 160 aa22■■□□□ 1.11
NUP50-209ENST00000432340 PPM1GO15355 546 aaPredicted RBP22■■□□□ 1.11
NUP50-209ENST00000432340 VEGFBP49765 207 aa22■■□□□ 1.11
NUP50-209ENST00000432340 CABP4P57796 275 aa22■■□□□ 1.11
NUP50-209ENST00000432340 LDHDQ86WU2 507 aa22■■□□□ 1.11
NUP50-209ENST00000432340 PDZRN3Q9UPQ7 1066 aa22■■□□□ 1.11
NUP50-209ENST00000432340 CCDC85CA6NKD9 419 aa21.99■■□□□ 1.11
NUP50-209ENST00000432340 NFKBIEO00221 500 aa21.97■■□□□ 1.11
NUP50-209ENST00000432340 SIN3AQ96ST3 1273 aa21.97■■□□□ 1.11
NUP50-209ENST00000432340 EYA1Q99502 592 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms