RNA–Protein interactions for RNA: ENST00000431678.5

PBRM1-213, Transcript of polybromo 1, human

TSL 5

Gene PBRM1, Length 809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PBRM1-213	ENST00000431678	SLC4A9	Q96Q91	983 aa		32.37	■■■□□ 2.77
PBRM1-213	ENST00000431678	WWC3	Q9ULE0	1092 aa		32.37	■■■□□ 2.77
PBRM1-213	ENST00000431678	KDR	P35968	1356 aa		32.35	■■■□□ 2.77
PBRM1-213	ENST00000431678	COL5A3	P25940	1745 aa	Predicted RBP	32.35	■■■□□ 2.77
PBRM1-213	ENST00000431678	SENP3-EIF4A1	A0A087X0R7	540 aa		32.34	■■■□□ 2.77
PBRM1-213	ENST00000431678	AEBP1	Q8IUX7	1158 aa		32.34	■■■□□ 2.77
PBRM1-213	ENST00000431678	KDM6A	O15550	1401 aa	Predicted RBP	32.34	■■■□□ 2.77
PBRM1-213	ENST00000431678	ZNF831	Q5JPB2	1677 aa		32.32	■■■□□ 2.76
PBRM1-213	ENST00000431678	MYH14	Q7Z406	1995 aa	Known RBP	32.31	■■■□□ 2.76
PBRM1-213	ENST00000431678	GIGYF1	O75420	1035 aa	Predicted RBP	32.31	■■■□□ 2.76
PBRM1-213	ENST00000431678	PLEKHG2	Q9H7P9	1386 aa		32.3	■■■□□ 2.76
PBRM1-213	ENST00000431678	MORC1	Q86VD1	984 aa		32.29	■■■□□ 2.76
PBRM1-213	ENST00000431678	ERVV-2	B6SEH9	535 aa		32.28	■■■□□ 2.76
PBRM1-213	ENST00000431678	PLEKHO1	Q53GL0	409 aa	Predicted RBP	32.28	■■■□□ 2.76
PBRM1-213	ENST00000431678	ZNF530	Q6P9A1	599 aa	Predicted RBP	32.28	■■■□□ 2.76
PBRM1-213	ENST00000431678	RBM42	Q9BTD8	480 aa	Known RBP	32.28	■■■□□ 2.76
PBRM1-213	ENST00000431678	KIAA1551	Q9HCM1	1747 aa		32.28	■■■□□ 2.76
PBRM1-213	ENST00000431678	CCER1	Q8TC90	406 aa	Predicted RBP	32.27	■■■□□ 2.76
PBRM1-213	ENST00000431678	DCAF5	Q96JK2	942 aa		32.27	■■■□□ 2.76
PBRM1-213	ENST00000431678	KIF13B	Q9NQT8	1826 aa		32.27	■■■□□ 2.76
PBRM1-213	ENST00000431678	N4BP2	Q86UW6	1770 aa	Predicted RBP	32.27	■■■□□ 2.76
PBRM1-213	ENST00000431678	ATP10D	Q9P241	1426 aa		32.26	■■■□□ 2.76
PBRM1-213	ENST00000431678	C4A	P0C0L4	1744 aa		32.25	■■■□□ 2.75
PBRM1-213	ENST00000431678	SCN11A	Q9UI33	1791 aa		32.23	■■■□□ 2.75
PBRM1-213	ENST00000431678	HSP90AB1	P08238	724 aa	Known RBP	32.23	■■■□□ 2.75
PBRM1-213	ENST00000431678	MMP10	P09238	476 aa		32.23	■■■□□ 2.75
PBRM1-213	ENST00000431678	CIC	Q96RK0	1608 aa	Predicted RBP	32.22	■■■□□ 2.75
PBRM1-213	ENST00000431678	VIRMA	Q69YN4	1812 aa	Known RBP	32.22	■■■□□ 2.75
PBRM1-213	ENST00000431678	CABP4	P57796	275 aa		32.22	■■■□□ 2.75
PBRM1-213	ENST00000431678	SULT6B1	Q6IMI4	303 aa		32.22	■■■□□ 2.75
PBRM1-213	ENST00000431678	RTCB	Q9Y3I0	505 aa	Known RBP	32.22	■■■□□ 2.75
PBRM1-213	ENST00000431678	AMOT	Q4VCS5	1084 aa		32.21	■■■□□ 2.75
PBRM1-213	ENST00000431678	TRAPPC3L	Q5T215	181 aa		32.21	■■■□□ 2.75
PBRM1-213	ENST00000431678	IL13	P35225	146 aa		32.2	■■■□□ 2.75
PBRM1-213	ENST00000431678	MTHFS	P49914	203 aa		32.2	■■■□□ 2.75
PBRM1-213	ENST00000431678	ARHGEF1	Q92888	912 aa	Known RBP	32.2	■■■□□ 2.75
PBRM1-213	ENST00000431678	TJP1	Q07157	1748 aa		32.2	■■■□□ 2.74
PBRM1-213	ENST00000431678	ADCY9	O60503	1353 aa		32.19	■■■□□ 2.74
PBRM1-213	ENST00000431678	KNSTRN	Q9Y448	316 aa		32.19	■■■□□ 2.74
PBRM1-213	ENST00000431678	PXDNL	A1KZ92	1463 aa		32.17	■■■□□ 2.74
PBRM1-213	ENST00000431678	PTCD1	O75127	700 aa	Known RBP	32.17	■■■□□ 2.74
PBRM1-213	ENST00000431678	AMER1	Q5JTC6	1135 aa	Predicted RBP	32.17	■■■□□ 2.74
PBRM1-213	ENST00000431678	RC3H1	Q5TC82	1133 aa	Known RBP	32.17	■■■□□ 2.74
PBRM1-213	ENST00000431678	NFATC2IP	Q8NCF5	419 aa		32.17	■■■□□ 2.74
PBRM1-213	ENST00000431678	CNTNAP4	Q9C0A0	1308 aa		32.17	■■■□□ 2.74
PBRM1-213	ENST00000431678	C1orf141	Q5JVX7	400 aa		32.15	■■■□□ 2.74
PBRM1-213	ENST00000431678	ZNF526	Q8TF50	670 aa	Predicted RBP	32.15	■■■□□ 2.74
PBRM1-213	ENST00000431678	RPS6KA4	O75676	772 aa		32.14	■■■□□ 2.74
PBRM1-213	ENST00000431678	GYS1	P13807	737 aa		32.14	■■■□□ 2.74
PBRM1-213	ENST00000431678	BRCA1	P38398	1863 aa	Known RBP	32.13	■■■□□ 2.73
PBRM1-213	ENST00000431678	KIF7	Q2M1P5	1343 aa		32.13	■■■□□ 2.73
PBRM1-213	ENST00000431678	NLGN1	Q8N2Q7	840 aa		32.12	■■■□□ 2.73
PBRM1-213	ENST00000431678	C10orf71	Q711Q0	1435 aa		32.11	■■■□□ 2.73
PBRM1-213	ENST00000431678		A0A0G2JLW4	131 aa		32.1	■■■□□ 2.73
PBRM1-213	ENST00000431678	ADRA2B	P18089	450 aa		32.1	■■■□□ 2.73
PBRM1-213	ENST00000431678	RFC4	P35249	363 aa		32.1	■■■□□ 2.73
PBRM1-213	ENST00000431678	GPBP1L1	Q9HC44	474 aa	Predicted RBP	32.1	■■■□□ 2.73
PBRM1-213	ENST00000431678	CEP350	Q5VT06	3117 aa		32.09	■■■□□ 2.73
PBRM1-213	ENST00000431678	ADAMTS7	Q9UKP4	1686 aa		32.08	■■■□□ 2.73
PBRM1-213	ENST00000431678	CRKL	P46109	303 aa	Known RBP	32.08	■■■□□ 2.73
PBRM1-213	ENST00000431678	SRP68	Q9UHB9	627 aa	Known RBP	32.08	■■■□□ 2.73
PBRM1-213	ENST00000431678	LGR6	Q9HBX8	967 aa		32.07	■■■□□ 2.72
PBRM1-213	ENST00000431678	HMOX1	P09601	288 aa		32.06	■■■□□ 2.72
PBRM1-213	ENST00000431678	TGFB2	P61812	414 aa		32.05	■■■□□ 2.72
PBRM1-213	ENST00000431678	DPEP1	P16444	411 aa		32.04	■■■□□ 2.72
PBRM1-213	ENST00000431678	BCS1L	Q9Y276	419 aa		32.04	■■■□□ 2.72
PBRM1-213	ENST00000431678	PER1	O15534	1290 aa	Predicted RBP	32.03	■■■□□ 2.72
PBRM1-213	ENST00000431678	AKAP4	Q5JQC9	854 aa		32.03	■■■□□ 2.72
PBRM1-213	ENST00000431678	INTS5	Q6P9B9	1019 aa	Known RBP	32.03	■■■□□ 2.72
PBRM1-213	ENST00000431678	FKBP8	Q14318	412 aa		32.02	■■■□□ 2.72
PBRM1-213	ENST00000431678	CCDC87	Q9NVE4	849 aa		32.02	■■■□□ 2.72
PBRM1-213	ENST00000431678	PARP3	Q9Y6F1	533 aa		32.02	■■■□□ 2.72
PBRM1-213	ENST00000431678	CC2D1B	Q5T0F9	858 aa	Known RBP	32.01	■■■□□ 2.71
PBRM1-213	ENST00000431678	DNAJC10	Q8IXB1	793 aa		32.01	■■■□□ 2.71
PBRM1-213	ENST00000431678	MRC1	P22897	1456 aa		32	■■■□□ 2.71
PBRM1-213	ENST00000431678	SLC39A6	Q13433	755 aa		32	■■■□□ 2.71
PBRM1-213	ENST00000431678	SLC52A2	Q9HAB3	445 aa		32	■■■□□ 2.71
PBRM1-213	ENST00000431678	USP42	Q9H9J4	1324 aa	Known RBP	32	■■■□□ 2.71
PBRM1-213	ENST00000431678	ARFGEF1	Q9Y6D6	1849 aa		31.99	■■■□□ 2.71
PBRM1-213	ENST00000431678	KCNA3	P22001	575 aa		31.99	■■■□□ 2.71
PBRM1-213	ENST00000431678	DDR1	Q08345	913 aa		31.99	■■■□□ 2.71
PBRM1-213	ENST00000431678	RNMT	O43148	476 aa	Known RBP	31.98	■■■□□ 2.71
PBRM1-213	ENST00000431678	MTHFSD	Q2M296	383 aa	Known RBP	31.98	■■■□□ 2.71
PBRM1-213	ENST00000431678	KCP	Q6ZWJ8	1503 aa		31.97	■■■□□ 2.71
PBRM1-213	ENST00000431678	KIF3C	O14782	793 aa		31.95	■■■□□ 2.71
PBRM1-213	ENST00000431678	FCHSD2	O94868	740 aa		31.95	■■■□□ 2.71
PBRM1-213	ENST00000431678	AFDN	P55196	1824 aa	Known RBP	31.94	■■■□□ 2.7
PBRM1-213	ENST00000431678	CNGB1	Q14028	1251 aa	Predicted RBP	31.94	■■■□□ 2.7
PBRM1-213	ENST00000431678	ARHGAP27	Q6ZUM4	889 aa		31.94	■■■□□ 2.7
PBRM1-213	ENST00000431678	UBR2	Q8IWV8	1755 aa		31.94	■■■□□ 2.7
PBRM1-213	ENST00000431678	DIAPH1	O60610	1272 aa	Known RBP	31.93	■■■□□ 2.7
PBRM1-213	ENST00000431678	COL3A1	P02461	1466 aa	Predicted RBP	31.91	■■■□□ 2.7
PBRM1-213	ENST00000431678	CYP19A1	P11511	503 aa	Predicted RBP	31.91	■■■□□ 2.7
PBRM1-213	ENST00000431678	SOS1	Q07889	1333 aa	Predicted RBP	31.91	■■■□□ 2.7
PBRM1-213	ENST00000431678	TM4SF1	P30408	202 aa		31.9	■■■□□ 2.7
PBRM1-213	ENST00000431678	USPL1	Q5W0Q7	1092 aa		31.9	■■■□□ 2.7
PBRM1-213	ENST00000431678	POLRMT	O00411	1230 aa	Known RBP	31.89	■■■□□ 2.7
PBRM1-213	ENST00000431678	CHRNA5	P30532	468 aa		31.88	■■■□□ 2.69
PBRM1-213	ENST00000431678	ZBTB1	Q9Y2K1	713 aa		31.88	■■■□□ 2.69
PBRM1-213	ENST00000431678	HSPA6	P17066	643 aa		31.87	■■■□□ 2.69

Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms