RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 ETNK1Q9HBU6 452 aa10.39□□□□□ -0.75
PTPN4-204ENST00000431283 GPR25O00155 361 aa10.38□□□□□ -0.75
PTPN4-204ENST00000431283 GPAMQ9HCL2 828 aa10.38□□□□□ -0.75
PTPN4-204ENST00000431283 NSFL1CQ9UNZ2 370 aaKnown RBP10.38□□□□□ -0.75
PTPN4-204ENST00000431283 SKIP12755 728 aa10.37□□□□□ -0.75
PTPN4-204ENST00000431283 GDF10P55107 478 aa10.37□□□□□ -0.75
PTPN4-204ENST00000431283 EML3Q32P44 896 aa10.37□□□□□ -0.75
PTPN4-204ENST00000431283 RHBDD1Q8TEB9 315 aa10.37□□□□□ -0.75
PTPN4-204ENST00000431283 FHDC1Q9C0D6 1143 aaPredicted RBP10.37□□□□□ -0.75
PTPN4-204ENST00000431283 MBIPQ9NS73 344 aa10.37□□□□□ -0.75
PTPN4-204ENST00000431283 RNF225M0QZC1 329 aaPredicted RBP10.36□□□□□ -0.75
PTPN4-204ENST00000431283 ZNF385CQ66K41 422 aaPredicted RBP10.36□□□□□ -0.75
PTPN4-204ENST00000431283 POM121Q96HA1 1249 aa10.36□□□□□ -0.75
PTPN4-204ENST00000431283 HRH3Q9Y5N1 445 aa10.36□□□□□ -0.75
PTPN4-204ENST00000431283 STAU1O95793 577 aaKnown RBP10.35□□□□□ -0.75
PTPN4-204ENST00000431283 INHAP05111 366 aa10.35□□□□□ -0.75
PTPN4-204ENST00000431283 GAS6Q14393 721 aa10.35□□□□□ -0.75
PTPN4-204ENST00000431283 C4orf17Q53FE4 359 aa10.35□□□□□ -0.75
PTPN4-204ENST00000431283 ADAMTS8Q9UP79 889 aa10.35□□□□□ -0.75
PTPN4-204ENST00000431283 MARSP56192 900 aaKnown RBP10.34□□□□□ -0.75
PTPN4-204ENST00000431283 PSME1Q06323 249 aa10.34□□□□□ -0.75
PTPN4-204ENST00000431283 PPARGC1BQ86YN6 1023 aaKnown RBP10.34□□□□□ -0.75
PTPN4-204ENST00000431283 ENAMQ9NRM1 1142 aa10.34□□□□□ -0.75
PTPN4-204ENST00000431283 PHF24Q9UPV7 400 aa10.34□□□□□ -0.75
PTPN4-204ENST00000431283 NOD1Q9Y239 953 aa10.34□□□□□ -0.75
PTPN4-204ENST00000431283 PIK3CDO00329 1044 aa10.33□□□□□ -0.76
PTPN4-204ENST00000431283 LZTS3O60299 673 aaPredicted RBP10.33□□□□□ -0.76
PTPN4-204ENST00000431283 MX2P20592 715 aa10.33□□□□□ -0.76
PTPN4-204ENST00000431283 TMEM132AQ24JP5 1023 aa10.33□□□□□ -0.76
PTPN4-204ENST00000431283 EFHC2Q5JST6 749 aa10.33□□□□□ -0.76
PTPN4-204ENST00000431283 TBC1D9Q6ZT07 1266 aa10.33□□□□□ -0.76
PTPN4-204ENST00000431283 NFATC2IPQ8NCF5 419 aa10.33□□□□□ -0.76
PTPN4-204ENST00000431283 ALG2Q9H553 416 aa10.33□□□□□ -0.76
PTPN4-204ENST00000431283 PLA2G4AP47712 749 aa10.32□□□□□ -0.76
PTPN4-204ENST00000431283 SCNN1DP51172 638 aa10.32□□□□□ -0.76
PTPN4-204ENST00000431283 WHAMMQ8TF30 809 aa10.32□□□□□ -0.76
PTPN4-204ENST00000431283 NIFKQ9BYG3 293 aaKnown RBP10.32□□□□□ -0.76
PTPN4-204ENST00000431283 SERTAD1Q9UHV2 236 aa10.32□□□□□ -0.76
PTPN4-204ENST00000431283 IGF1RP08069 1367 aa10.31□□□□□ -0.76
PTPN4-204ENST00000431283 MSX1P28360 303 aa10.31□□□□□ -0.76
PTPN4-204ENST00000431283 SMTNP53814 917 aa10.31□□□□□ -0.76
PTPN4-204ENST00000431283 LBRQ14739 615 aaKnown RBP10.31□□□□□ -0.76
PTPN4-204ENST00000431283 BACH1O14867 736 aa10.3□□□□□ -0.76
PTPN4-204ENST00000431283 AIDAQ96BJ3 306 aa10.3□□□□□ -0.76
PTPN4-204ENST00000431283 RUBCNLQ9H714 662 aa10.3□□□□□ -0.76
PTPN4-204ENST00000431283 GTF2IP78347 998 aa10.29□□□□□ -0.76
PTPN4-204ENST00000431283 CFHR5Q9BXR6 569 aa10.29□□□□□ -0.76
PTPN4-204ENST00000431283 CELA2BP08218 269 aaPredicted RBP10.28□□□□□ -0.76
PTPN4-204ENST00000431283 NCOA4Q13772 614 aa10.28□□□□□ -0.76
PTPN4-204ENST00000431283 NBPF1Q3BBV0 1214 aa10.28□□□□□ -0.76
PTPN4-204ENST00000431283 LYPD4Q6UWN0 246 aa10.28□□□□□ -0.76
PTPN4-204ENST00000431283 USP17L5A8MUK1 530 aa10.27□□□□□ -0.77
PTPN4-204ENST00000431283 ARHGEF15O94989 841 aa10.27□□□□□ -0.77
PTPN4-204ENST00000431283 MAP2K3P46734 347 aa10.27□□□□□ -0.77
PTPN4-204ENST00000431283 KCNMA1Q12791 1236 aa10.27□□□□□ -0.77
PTPN4-204ENST00000431283 TRIM50Q86XT4 487 aa10.27□□□□□ -0.77
PTPN4-204ENST00000431283 DEPDC4Q8N2C3 294 aa10.27□□□□□ -0.77
PTPN4-204ENST00000431283 C1orf216Q8TAB5 229 aa10.27□□□□□ -0.77
PTPN4-204ENST00000431283 SCARF2Q96GP6 870 aaPredicted RBP10.27□□□□□ -0.77
PTPN4-204ENST00000431283 HDGFL1Q5TGJ6 251 aa10.26□□□□□ -0.77
PTPN4-204ENST00000431283 NEDD1Q8NHV4 660 aa10.26□□□□□ -0.77
PTPN4-204ENST00000431283 PCDHGA11Q9Y5H2 935 aa10.26□□□□□ -0.77
PTPN4-204ENST00000431283 A6NJY4 79 aa10.25□□□□□ -0.77
PTPN4-204ENST00000431283 POM121CA8CG34 1229 aa10.25□□□□□ -0.77
PTPN4-204ENST00000431283 TMEM229AB2RXF0 380 aa10.25□□□□□ -0.77
PTPN4-204ENST00000431283 CDK2AP1O14519 115 aa10.25□□□□□ -0.77
PTPN4-204ENST00000431283 BCRP11274 1271 aa10.25□□□□□ -0.77
PTPN4-204ENST00000431283 TATP17735 454 aaPredicted RBP10.25□□□□□ -0.77
PTPN4-204ENST00000431283 ARSJQ5FYB0 599 aaPredicted RBP10.25□□□□□ -0.77
PTPN4-204ENST00000431283 FIGNL1Q6PIW4 674 aa10.25□□□□□ -0.77
PTPN4-204ENST00000431283 SLC4A9Q96Q91 983 aa10.25□□□□□ -0.77
PTPN4-204ENST00000431283 CABP1Q9NZU7 370 aa10.25□□□□□ -0.77
PTPN4-204ENST00000431283 ATP1A2P50993 1020 aa10.24□□□□□ -0.77
PTPN4-204ENST00000431283 TMEM151AQ8N4L1 468 aa10.24□□□□□ -0.77
PTPN4-204ENST00000431283 ATXN7L1Q9ULK2 861 aaPredicted RBP10.24□□□□□ -0.77
PTPN4-204ENST00000431283 PODNQ7Z5L7 613 aa10.23□□□□□ -0.77
PTPN4-204ENST00000431283 CRISPLD1Q9H336 500 aa10.23□□□□□ -0.77
PTPN4-204ENST00000431283 GJA3Q9Y6H8 435 aa10.23□□□□□ -0.77
PTPN4-204ENST00000431283 GDF11O95390 407 aa10.22□□□□□ -0.77
PTPN4-204ENST00000431283 IRS1P35568 1242 aa10.22□□□□□ -0.77
PTPN4-204ENST00000431283 RASSF7Q02833 373 aa10.22□□□□□ -0.77
PTPN4-204ENST00000431283 ACDQ96AP0 544 aa10.22□□□□□ -0.77
PTPN4-204ENST00000431283 OXCT2Q9BYC2 517 aaPredicted RBP10.22□□□□□ -0.77
PTPN4-204ENST00000431283 RBM19Q9Y4C8 960 aaKnown RBP10.22□□□□□ -0.77
PTPN4-204ENST00000431283 BMP4P12644 408 aa10.21□□□□□ -0.77
PTPN4-204ENST00000431283 MTFR1Q15390 333 aa10.21□□□□□ -0.77
PTPN4-204ENST00000431283 NLRP8Q86W28 1048 aa10.21□□□□□ -0.77
PTPN4-204ENST00000431283 PROSER2Q86WR7 435 aaPredicted RBP10.21□□□□□ -0.77
PTPN4-204ENST00000431283 USP17L3A6NCW0 530 aa10.2□□□□□ -0.78
PTPN4-204ENST00000431283 USP17L4A6NCW7 530 aa10.2□□□□□ -0.78
PTPN4-204ENST00000431283 ATP9BO43861 1147 aa10.2□□□□□ -0.78
PTPN4-204ENST00000431283 THBS1P07996 1170 aa10.2□□□□□ -0.78
PTPN4-204ENST00000431283 KANK3Q6NY19 840 aa10.2□□□□□ -0.78
PTPN4-204ENST00000431283 USP17L2Q6R6M4 530 aa10.2□□□□□ -0.78
PTPN4-204ENST00000431283 BICDL1Q6ZP65 573 aa10.2□□□□□ -0.78
PTPN4-204ENST00000431283 USP17L1Q7RTZ2 530 aa10.2□□□□□ -0.78
PTPN4-204ENST00000431283 PLEKHM2Q8IWE5 1019 aa10.2□□□□□ -0.78
PTPN4-204ENST00000431283 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.2□□□□□ -0.78
PTPN4-204ENST00000431283 CLUAP1Q96AJ1 413 aa10.2□□□□□ -0.78
PTPN4-204ENST00000431283 ABHD17AQ96GS6 310 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms