RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 FAM161AQ3B820 660 aa21.05■□□□□ 0.96
USHBP1-203ENST00000431146 EIF4A1P60842 406 aaKnown RBP21.04■□□□□ 0.96
USHBP1-203ENST00000431146 SLC4A10Q6U841 1118 aa21.04■□□□□ 0.96
USHBP1-203ENST00000431146 TATP17735 454 aaPredicted RBP21.04■□□□□ 0.96
USHBP1-203ENST00000431146 CHMP4BQ9H444 224 aaKnown RBP21.04■□□□□ 0.96
USHBP1-203ENST00000431146 EIF2S2P20042 333 aaKnown RBP21.02■□□□□ 0.96
USHBP1-203ENST00000431146 HDGFL1Q5TGJ6 251 aa21.02■□□□□ 0.96
USHBP1-203ENST00000431146 SIRT2Q8IXJ6 389 aa21.02■□□□□ 0.96
USHBP1-203ENST00000431146 ABCA3Q99758 1704 aa21.02■□□□□ 0.96
USHBP1-203ENST00000431146 NHSL1Q5SYE7 1610 aa21.02■□□□□ 0.96
USHBP1-203ENST00000431146 FLIIQ13045 1269 aa21.02■□□□□ 0.96
USHBP1-203ENST00000431146 SMC5Q8IY18 1101 aa21.02■□□□□ 0.96
USHBP1-203ENST00000431146 ABCC6O95255 1503 aa21.01■□□□□ 0.95
USHBP1-203ENST00000431146 CACNA1FO60840 1977 aa21.01■□□□□ 0.95
USHBP1-203ENST00000431146 ANP32AP39687 249 aaKnown RBP21.01■□□□□ 0.95
USHBP1-203ENST00000431146 FKBP5Q13451 457 aaPredicted RBP21.01■□□□□ 0.95
USHBP1-203ENST00000431146 MEIS3Q99687 375 aa20.99■□□□□ 0.95
USHBP1-203ENST00000431146 SIPA1L3O60292 1781 aaPredicted RBP20.99■□□□□ 0.95
USHBP1-203ENST00000431146 PHAXQ9H814 394 aaKnown RBP20.99■□□□□ 0.95
USHBP1-203ENST00000431146 SPG7Q9UQ90 795 aa20.99■□□□□ 0.95
USHBP1-203ENST00000431146 PHKG2P15735 406 aa20.98■□□□□ 0.95
USHBP1-203ENST00000431146 SOS1Q07889 1333 aaPredicted RBP20.98■□□□□ 0.95
USHBP1-203ENST00000431146 OVOS2A0A0G2JMS6 1433 aa20.97■□□□□ 0.95
USHBP1-203ENST00000431146 KDM6AO15550 1401 aaPredicted RBP20.97■□□□□ 0.95
USHBP1-203ENST00000431146 SCN11AQ9UI33 1791 aa20.97■□□□□ 0.95
USHBP1-203ENST00000431146 TOM1L2Q6ZVM7 507 aa20.97■□□□□ 0.95
USHBP1-203ENST00000431146 ADAMTS7Q9UKP4 1686 aa20.97■□□□□ 0.95
USHBP1-203ENST00000431146 WDR17Q8IZU2 1322 aa20.96■□□□□ 0.95
USHBP1-203ENST00000431146 PRAMEF22A3QJZ6 481 aa20.96■□□□□ 0.95
USHBP1-203ENST00000431146 ANXA1P04083 346 aa20.96■□□□□ 0.95
USHBP1-203ENST00000431146 LNPKQ9C0E8 428 aa20.96■□□□□ 0.95
USHBP1-203ENST00000431146 CHPF2Q9P2E5 772 aa20.96■□□□□ 0.95
USHBP1-203ENST00000431146 COL5A2P05997 1499 aaPredicted RBP20.95■□□□□ 0.94
USHBP1-203ENST00000431146 CYP27B1O15528 508 aa20.95■□□□□ 0.94
USHBP1-203ENST00000431146 NUCB1Q02818 461 aa20.95■□□□□ 0.94
USHBP1-203ENST00000431146 STRN4Q9NRL3 753 aa20.95■□□□□ 0.94
USHBP1-203ENST00000431146 SLC39A6Q13433 755 aa20.95■□□□□ 0.94
USHBP1-203ENST00000431146 IFNL2Q8IZJ0 200 aa20.95■□□□□ 0.94
USHBP1-203ENST00000431146 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.94■□□□□ 0.94
USHBP1-203ENST00000431146 PKD1L3Q7Z443 1732 aa20.94■□□□□ 0.94
USHBP1-203ENST00000431146 ROBO1Q9Y6N7 1651 aa20.94■□□□□ 0.94
USHBP1-203ENST00000431146 CCT4P50991 539 aaKnown RBP20.93■□□□□ 0.94
USHBP1-203ENST00000431146 ANKRD45Q5TZF3 282 aa20.93■□□□□ 0.94
USHBP1-203ENST00000431146 NFATC2IPQ8NCF5 419 aa20.93■□□□□ 0.94
USHBP1-203ENST00000431146 ATP10DQ9P241 1426 aa20.93■□□□□ 0.94
USHBP1-203ENST00000431146 SLC52A2Q9HAB3 445 aa20.93■□□□□ 0.94
USHBP1-203ENST00000431146 HOXB7P09629 217 aa20.92■□□□□ 0.94
USHBP1-203ENST00000431146 CHD1LQ86WJ1 897 aa20.92■□□□□ 0.94
USHBP1-203ENST00000431146 GIGYF1O75420 1035 aaPredicted RBP20.92■□□□□ 0.94
USHBP1-203ENST00000431146 GCC1Q96CN9 775 aa20.92■□□□□ 0.94
USHBP1-203ENST00000431146 CEP85Q6P2H3 762 aa20.91■□□□□ 0.94
USHBP1-203ENST00000431146 LARP1Q6PKG0 1096 aaKnown RBP20.91■□□□□ 0.94
USHBP1-203ENST00000431146 SEC24BO95487 1268 aa20.9■□□□□ 0.94
USHBP1-203ENST00000431146 ANKRD44Q8N8A2 993 aa20.9■□□□□ 0.94
USHBP1-203ENST00000431146 IPO9Q96P70 1041 aaKnown RBP20.9■□□□□ 0.94
USHBP1-203ENST00000431146 EVA1CP58658 441 aa20.89■□□□□ 0.94
USHBP1-203ENST00000431146 ZNF790Q6PG37 636 aa20.89■□□□□ 0.94
USHBP1-203ENST00000431146 PROSER3Q2NL68 480 aa20.89■□□□□ 0.93
USHBP1-203ENST00000431146 USP35Q9P2H5 1018 aa20.89■□□□□ 0.93
USHBP1-203ENST00000431146 HEG1Q9ULI3 1381 aa20.89■□□□□ 0.93
USHBP1-203ENST00000431146 PARP4Q9UKK3 1724 aaKnown RBP20.88■□□□□ 0.93
USHBP1-203ENST00000431146 DCAF5Q96JK2 942 aa20.88■□□□□ 0.93
USHBP1-203ENST00000431146 LTBP4Q8N2S1 1624 aa20.87■□□□□ 0.93
USHBP1-203ENST00000431146 RPAP2Q8IXW5 612 aaPredicted RBP20.87■□□□□ 0.93
USHBP1-203ENST00000431146 N4BP2Q86UW6 1770 aaPredicted RBP20.86■□□□□ 0.93
USHBP1-203ENST00000431146 C5P01031 1676 aa20.86■□□□□ 0.93
USHBP1-203ENST00000431146 ZCRB1Q8TBF4 217 aaKnown RBP20.86■□□□□ 0.93
USHBP1-203ENST00000431146 CARD10Q9BWT7 1032 aa20.86■□□□□ 0.93
USHBP1-203ENST00000431146 DBF4Q9UBU7 674 aaPredicted RBP20.86■□□□□ 0.93
USHBP1-203ENST00000431146 PI4KAP2A4QPH2 592 aa20.85■□□□□ 0.93
USHBP1-203ENST00000431146 PI4KAP1Q8N8J0 262 aa20.85■□□□□ 0.93
USHBP1-203ENST00000431146 DCTPP1Q9H773 170 aa20.85■□□□□ 0.93
USHBP1-203ENST00000431146 BTG4Q9NY30 223 aa20.85■□□□□ 0.93
USHBP1-203ENST00000431146 APBB1O00213 710 aa20.84■□□□□ 0.93
USHBP1-203ENST00000431146 PXDNLA1KZ92 1463 aa20.84■□□□□ 0.93
USHBP1-203ENST00000431146 GNAI2P04899 355 aa20.84■□□□□ 0.93
USHBP1-203ENST00000431146 IL2RBP14784 551 aa20.84■□□□□ 0.93
USHBP1-203ENST00000431146 ZNF496Q96IT1 587 aaPredicted RBP20.84■□□□□ 0.93
USHBP1-203ENST00000431146 CABP4P57796 275 aa20.83■□□□□ 0.93
USHBP1-203ENST00000431146 DDX54Q8TDD1 881 aaKnown RBP20.83■□□□□ 0.93
USHBP1-203ENST00000431146 CHMP4AQ9BY43 222 aa20.83■□□□□ 0.93
USHBP1-203ENST00000431146 PCDH11XQ9BZA7 1347 aa20.83■□□□□ 0.93
USHBP1-203ENST00000431146 PCDH11YQ9BZA8 1340 aa20.83■□□□□ 0.93
USHBP1-203ENST00000431146 PLEKHG2Q9H7P9 1386 aa20.83■□□□□ 0.93
USHBP1-203ENST00000431146 MRC1P22897 1456 aa20.83■□□□□ 0.92
USHBP1-203ENST00000431146 HSP90AB1P08238 724 aaKnown RBP20.83■□□□□ 0.92
USHBP1-203ENST00000431146 USP44Q9H0E7 712 aa20.83■□□□□ 0.92
USHBP1-203ENST00000431146 DNAAF4Q8WXU2 420 aa20.82■□□□□ 0.92
USHBP1-203ENST00000431146 NOP58Q9Y2X3 529 aaKnown RBP20.82■□□□□ 0.92
USHBP1-203ENST00000431146 ADCY9O60503 1353 aa20.82■□□□□ 0.92
USHBP1-203ENST00000431146 GNAI3P08754 354 aa20.81■□□□□ 0.92
USHBP1-203ENST00000431146 TTC5Q8N0Z6 440 aa20.81■□□□□ 0.92
USHBP1-203ENST00000431146 LRRFIP2Q9Y608 721 aaKnown RBP20.81■□□□□ 0.92
USHBP1-203ENST00000431146 SHANK3Q9BYB0 1731 aa20.81■□□□□ 0.92
USHBP1-203ENST00000431146 AHDC1Q5TGY3 1603 aaPredicted RBP20.81■□□□□ 0.92
USHBP1-203ENST00000431146 SRCIN1Q9C0H9 1055 aa20.81■□□□□ 0.92
USHBP1-203ENST00000431146 SMARCA5O60264 1052 aaPredicted RBP20.8■□□□□ 0.92
USHBP1-203ENST00000431146 ZBTB47Q9UFB7 747 aaPredicted RBP20.8■□□□□ 0.92
USHBP1-203ENST00000431146 AIMP1Q12904 312 aaKnown RBP20.8■□□□□ 0.92
USHBP1-203ENST00000431146 C16orf71Q8IYS4 520 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms